def test_1_simple(self):
B = BlockProcess()
B.path_in = ["./data/vagus001.h5","volume/data"]
B.path_out = ["/tmp/test.h5","data"]
B.Process = func
B.run()
res_Block = h5py.File("/tmp/test.h5")["data/axons"][::]
data_in = h5py.File("./data/vagus001.h5")["volume/data"][::]
res_Norm = func(data_in)[0]
assert numpy.mean(res_Block!=0) == numpy.mean(res_Norm!=0)
def test_2_8Blocks(self):
B = BlockProcess()
B.path_in = ["./data/vagus001.h5","volume/data"]
B.path_out = ["/tmp/test.h5","data"]
B.blockSize = [75, 75, 25]
B.helo = 10
B.Process = func
B.Workers=6
B.run()
res_Block = h5py.File("/tmp/test.h5")["data/axons"][::]
data_in = h5py.File("./data/vagus001.h5")["volume/data"][::]
res_Norm = func(data_in)[0]
assert numpy.mean(res_Block!=0) == numpy.mean(res_Norm!=0)