Exemplos de Hie.parse em Python

Exemplo n.º 1

Arquivo: test_SCOP_Hie.py Projeto: iriziotis/biopython_bugfixes

 def testParse(self):
     """Test if all records in a HIE file are being read."""
     count = 0
     with open(self.filename) as f:
         for record in Hie.parse(f):
             count += 1
     self.assertEqual(count, 21)

Exemplo n.º 2

Arquivo: test_SCOP_Hie.py Projeto: manucorreia/biopython

 def testParse(self):
     f = open(self.filename)
     try:
         count = 0
         for record in Hie.parse(f):
             count += 1
         assert count == 21, "Wrong number of records?! " + str(count)
     finally:
         f.close()

Exemplo n.º 3

Arquivo: test_SCOP_Hie.py Projeto: andyoberlin/biopython

 def testParse(self):
    f = open(self.filename)
    try: 
        count = 0
        for record in Hie.parse(f):
            count +=1
        assert count == 21, "Wrong number of records?! "+str(count)
    finally:
        f.close()

Exemplo n.º 4

 def testParse(self):
     """Test if all records in a HIE file are being read."""
     f = open(self.filename)
     try:
         count = 0
         for record in Hie.parse(f):
             count += 1
         self.assertEqual(count, 21)
     finally:
         f.close()

Exemplo n.º 5

Arquivo: test_SCOP_Hie.py Projeto: BIGLabHYU/biopython

 def testParse(self):
     """Test if all records in a HIE file are being read"""
     f = open(self.filename)
     try:
         count = 0
         for record in Hie.parse(f):
             count += 1
         self.assertEqual(count, 21)
     finally:
         f.close()