def preProcess(self, _edObject=None):
"""
Loads the ISPyB execution plugin and prepares the input data
"""
EDPluginControl.preProcess(self, _edObject)
EDVerbose.DEBUG("EDPluginControlISPyBv1_4.preProcess...")
if (self.hasDataInput("shortComments")):
self.strShortComments = self.getDataInput(
"shortComments")[0].getValue()
if (self.hasDataInput("comments")):
self.strComments = self.getDataInput("comments")[0].getValue()
if (self.hasDataInput("statusMessage")):
self.strStatusMessage = self.getDataInput(
"statusMessage")[0].getValue()
self.edPluginExecISPyB = self.loadPlugin(
self.edStringPluginExecISPyBName)
try:
xsDataInputISPyBStoreScreening = EDHandlerXSDataISPyBv1_4.generateXSDataInputISPyBStoreScreening(self.getDataInput(),
self.strStatusMessage, \
self.strShortComments, \
self.strComments)
except Exception, error:
raise
# This exception handling needs to be rethought, see bug #43.
errorMessage = "EDPluginControlISPyBv1_4.preProcess: Unexpected error in ISPyB handler: %r" % error
EDVerbose.error(errorMessage)
self.addErrorMessage(errorMessage)
raise RuntimeError, errorMessage
def preProcess(self, _edObject=None):
"""
Loads the ISPyB execution plugin and prepares the input data
"""
EDPluginControl.preProcess(self, _edObject)
self.DEBUG("EDPluginControlISPyBv1_4.preProcess...")
if (self.hasDataInput("shortComments")):
self.strShortComments = self.getDataInput("shortComments")[0].getValue()
if (self.hasDataInput("comments")):
self.strComments = self.getDataInput("comments")[0].getValue()
if (self.hasDataInput("statusMessage")):
self.strStatusMessage = self.getDataInput("statusMessage")[0].getValue()
self.edPluginExecISPyB = self.loadPlugin(self.edStringPluginExecISPyBName)
try:
xsDataInputISPyBStoreScreening = EDHandlerXSDataISPyBv1_4.generateXSDataInputISPyBStoreScreening(self.getDataInput(),
self.strStatusMessage, \
self.strShortComments, \
self.strComments)
except Exception as error:
raise
# This exception handling needs to be rethought, see bug #43.
errorMessage = "EDPluginControlISPyBv1_4.preProcess: Unexpected error in ISPyB handler: %r" % error
self.error(errorMessage)
self.addErrorMessage(errorMessage)
raise RuntimeError(errorMessage)
self.edPluginExecISPyB.setDataInput(xsDataInputISPyBStoreScreening)
def testGenerateXSDataInputISPyB(self):
"""
This method is testing the generation of the XSDataInputISPyB object given a XSDataIndexingInput object.
"""
strReferenceInputControlISPyBFile = EDUtilsPath.mergePath(self.strDataPath, "XSDataInputControlISPyB_reference.xml")
strPath = os.path.join(self.strDataPath, strReferenceInputControlISPyBFile)
strXMLIndexingInput = EDUtilsFile.readFileAndParseVariables(strPath, self.dictReplace)
xsDataInputControlISPyB = XSDataInputControlISPyB.parseString(strXMLIndexingInput)
xsDataInputISPyB = EDHandlerXSDataISPyBv1_4.generateXSDataInputISPyBStoreScreening(xsDataInputControlISPyB)
strReferenceInputISPyBFile = EDUtilsPath.mergePath(self.strDataPath, "XSDataInputISPyB_reference.xml")
strReferencePath = os.path.join(self.strDataPath, strReferenceInputISPyBFile)
strXMLInputISPyBReference = EDUtilsFile.readFileAndParseVariables(strReferencePath, self.dictReplace)
EDFactoryPluginStatic.loadModule("XSDataISPyBv1_4")
def testGenerateXSDataInputISPyB(self):
"""
This method is testing the generation of the XSDataInputISPyB object given a XSDataIndexingInput object.
"""
strReferenceInputControlISPyBFile = EDUtilsPath.mergePath(
self.strDataPath, "XSDataInputControlISPyB_reference.xml")
strPath = os.path.join(self.strDataPath,
strReferenceInputControlISPyBFile)
strXMLIndexingInput = EDUtilsFile.readFileAndParseVariables(
strPath, self.dictReplace)
xsDataInputControlISPyB = XSDataInputControlISPyB.parseString(
strXMLIndexingInput)
xsDataInputISPyB = EDHandlerXSDataISPyBv1_4.generateXSDataInputISPyBStoreScreening(
xsDataInputControlISPyB)
strReferenceInputISPyBFile = EDUtilsPath.mergePath(
self.strDataPath, "XSDataInputISPyB_reference.xml")
strReferencePath = os.path.join(self.strDataPath,
strReferenceInputISPyBFile)
strXMLInputISPyBReference = EDUtilsFile.readFileAndParseVariables(
strReferencePath, self.dictReplace)
EDFactoryPluginStatic.loadModule("XSDataISPyBv1_4")
