def make_psana_cfg_file_for_cora_split (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
}
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '-123456' # = default value - will not use trheshold
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '-123456' # = default value - will not use trheshold
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_cora_split (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
}
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['DO_CONST_THR' ] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
self.print_substitution_dict()
self.make_cfg_file()
def setTableInfoItems(self):
self.item_data_file.setText(os.path.basename(fnm.path_data_xtc_cond()))
if cp.bat_dark_is_used.value():
self.item_dark_file.setText(
os.path.basename(fnm.path_pedestals_ave()))
else:
self.item_dark_file.setText('is not used')
if cp.ccdcorr_flatfield.value():
self.item_flat_file.setText(os.path.basename(fnm.path_flat()))
else:
self.item_flat_file.setText('is not used')
if cp.ccdcorr_blemish.value():
self.item_blem_file.setText(os.path.basename(fnm.path_blem()))
else:
self.item_blem_file.setText('is not used')
self.item_data_start.setText(str(cp.bat_data_start.value()))
self.item_data_end.setText(str(cp.bat_data_end.value()))
self.item_data_total.setText(str(cp.bat_data_total.value()))
self.item_data_time.setText(
str(cp.bat_data_dt_ave.value()) + u'\u00B1' +
str(cp.bat_data_dt_rms.value()))
def make_psana_cfg_file_for_data_aver_v1(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-data-aver.cfg').path()
self.path_out = fnm.path_data_aver_psana_cfg()
self.d_subs = {
'FNAME_XTC': fnm.path_data_xtc_cond(),
'SKIP': str(cp.bat_data_start.value() - 1),
'EVENTS':
str(cp.bat_data_end.value() - cp.bat_data_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'FNAME_DATA_AVE': fnm.path_data_raw_ave(),
'FNAME_DATA_RMS': fnm.path_data_raw_rms(),
'SAT_THR_ADU': str(cp.ccdset_adcsatu.value()),
'SATPIX_MASK': fnm.path_satpix_mask(),
'SATPIX_FRAC': fnm.path_satpix_frac(),
'HOTPIX_MASK': '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC': '' # fnm.path_hotpix_frac()
}
# cp.ccdset_ccdgain.value()
# cp.ccdset_ccdeff .value()
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def on_cbx_all_chunks(self):
#if self.cbx_all_chunks .hasFocus() :
par = cp.use_data_xtc_all
par.setValue( self.cbx_all_chunks.isChecked() )
msg = 'on_cbx - set status of parameter use_data_xtc_all: ' + str(par.value())
logger.info(msg, __name__ )
self.setButtonState()
self.edi_path.setText( fnm.path_data_xtc_cond() )
def make_psana_cfg_file_for_cora_split_v1(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {
'FNAME_XTC': fnm.path_data_xtc_cond(),
'SKIP': str(cp.bat_data_start.value() - 1),
'EVENTS':
str(cp.bat_data_end.value() - cp.bat_data_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'PATH_PREFIX_CORA': str(fnm.path_prefix_cora()),
'IMG_NPARTS': str(cp.bat_img_nparts.value()),
'FNAME_PEDS_AVE': fnm.path_pedestals_ave(),
'FNAME_DATA_AVE': fnm.path_data_ave(),
'FNAME_DATA_RMS': fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file(fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG'] = str(fname_imon_cfg)
if cp.lld_type.value() == 'ADU': # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU'] = str(cp.lld_adu.value())
self.d_subs['DO_CONST_THR'] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS':
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str(cp.lld_rms.value())
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else:
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists(fnm.path_cora_split_map_static_q()):
self.d_subs['FNAME_MAP_BINS'] = fnm.path_cora_split_map_static_q()
else:
self.d_subs['FNAME_MAP_BINS'] = ''
self.d_subs['FNAME_INT_BINS'] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS'] = str(cp.ana_stat_part_q.value())
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def make_psana_cfg_file_for_data_scan (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-data-scan.cfg').path()
self.path_out = fnm.path_data_scan_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : 'IS_NOT_USED',
'EVENTS' : 'FOR_ALL_EVENTS',
'FNAME_TIMESTAMP_LIST' : fnm.path_data_scan_tstamp_list(),
'FNAME_INTENSITY_MONITORS_DATA' : fnm.path_data_scan_monitors_data(),
'FNAME_INTENSITY_MONITORS_COMMENTS' : fnm.path_data_scan_monitors_commments()
}
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_data_scan (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-data-scan.cfg').path()
self.path_out = fnm.path_data_scan_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : 'IS_NOT_USED',
'EVENTS' : 'FOR_ALL_EVENTS',
'FNAME_TIMESTAMP_LIST' : fnm.path_data_scan_tstamp_list(),
'FNAME_INTENSITY_MONITORS_DATA' : fnm.path_data_scan_monitors_data(),
'FNAME_INTENSITY_MONITORS_COMMENTS' : fnm.path_data_scan_monitors_commments()
}
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_cora_split_v1 (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
'FNAME_DATA_AVE' : fnm.path_data_ave(),
'FNAME_DATA_RMS' : fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file (fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG' ] = str( fname_imon_cfg )
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['DO_CONST_THR' ] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists( fnm.path_cora_split_map_static_q() ) :
self.d_subs['FNAME_MAP_BINS' ] = fnm.path_cora_split_map_static_q()
else :
self.d_subs['FNAME_MAP_BINS' ] = ''
self.d_subs['FNAME_INT_BINS' ] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS' ] = str( cp.ana_stat_part_q.value() )
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def make_psana_cfg_file_for_peds_aver (self) :
self.str_of_modules = ''
self.txt_cfg_header = '# Autogenerated config file for dark average\n' \
+ '# Useful command:\n' \
+ '# psana -m EventKeys -n 5 ' + fnm.path_data_xtc_cond() \
+ '\n'
self.txt_cfg_body = '\n\n'
self.add_cfg_module_tahometer()
self.add_cfg_module_img_producer()
self.add_cfg_module_ndarraverage_for_peds_aver()
self.cfg_file_header_for_peds_aver()
self.save_cfg_file(self.txt_cfg_header + self.txt_cfg_body, fnm.path_peds_aver_psana_cfg())
def make_psana_cfg_file_for_peds_aver(self):
self.str_of_modules = ''
self.txt_cfg_header = '# Autogenerated config file for dark average\n' \
+ '# Useful command:\n' \
+ '# psana -m EventKeys -n 5 ' + fnm.path_data_xtc_cond() \
+ '\n'
self.txt_cfg_body = '\n\n'
self.add_cfg_module_tahometer()
self.add_cfg_module_img_producer()
self.add_cfg_module_ndarraverage_for_peds_aver()
self.cfg_file_header_for_peds_aver()
self.save_cfg_file(self.txt_cfg_header + self.txt_cfg_body,
fnm.path_peds_aver_psana_cfg())
def on_but_path(self):
logger.debug('Data file browser', __name__ )
path = str(self.edi_path.text())
path = str( QtGui.QFileDialog.getOpenFileName(self,'Select file',path) )
dname, fname = os.path.split(path)
if dname == '' or fname == '' :
logger.info('Input directiry name or file name is empty... keep file path unchanged...')
return
cp.in_dir_data .setValue(dname)
cp.in_file_data.setValue(fname)
#self.edi_path.setText(path)
self.edi_path.setText( fnm.path_data_xtc_cond() )
logger.info('selected file: ' + str(fnm.path_data_xtc()), __name__ )
self.set_default_pars()
blp.parse_batch_log_data_scan()
self.set_fields()
def setTableInfoItems(self) :
self.item_data_file.setText( os.path.basename(fnm.path_data_xtc_cond()) )
if cp.bat_dark_is_used.value() : self.item_dark_file.setText( os.path.basename(fnm.path_pedestals_ave()) )
else : self.item_dark_file.setText( 'is not used' )
if cp.ccdcorr_flatfield.value() : self.item_flat_file.setText( os.path.basename(fnm.path_flat()) )
else : self.item_flat_file.setText( 'is not used' )
if cp.ccdcorr_blemish.value() : self.item_blam_file.setText( os.path.basename(fnm.path_blam()) )
else : self.item_blam_file.setText( 'is not used' )
self.item_data_start.setText ( str( cp.bat_data_start.value() ) )
self.item_data_end .setText ( str( cp.bat_data_end .value() ) )
self.item_data_total.setText ( str( cp.bat_data_total.value() ) )
self.item_data_time .setText ( str( cp.bat_data_dt_ave.value() ) + u'\u00B1'
+ str( cp.bat_data_dt_rms.value() ) )
def make_psana_cfg_file_for_data_aver (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-data-aver.cfg').path()
self.path_out = fnm.path_data_aver_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FNAME_DATA_AVE' : fnm.path_data_ave(),
'FNAME_DATA_RMS' : fnm.path_data_rms(),
'SAT_THR_ADU' : str( cp.ccdset_adcsatu.value() ),
'SATPIX_MASK' : fnm.path_satpix_mask(),
'SATPIX_FRAC' : fnm.path_satpix_frac(),
'HOTPIX_MASK' : '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC' : '' # fnm.path_hotpix_frac()
}
# cp.ccdset_ccdgain.value()
# cp.ccdset_ccdeff .value()
self.print_substitution_dict()
self.make_cfg_file()
def __init__ ( self, parent=None ) :
QtGui.QWidget.__init__(self, parent)
self.setGeometry(200, 400, 530, 30)
self.setWindowTitle('Data file')
self.setFrame()
self.cbx_data = QtGui.QCheckBox('Activate / protect buttons', self)
self.cbx_data.setChecked( cp.is_active_data_gui.value() )
self.cbx_all_chunks = QtGui.QCheckBox('Use all xtc chunks', self)
self.cbx_all_chunks.setChecked( cp.use_data_xtc_all.value() )
self.edi_path = QtGui.QLineEdit( fnm.path_data_xtc_cond() )
self.edi_path.setReadOnly( True )
self.lab_status = QtGui.QLabel('Status')
self.lab_batch = QtGui.QLabel('Batch')
self.lab_start = QtGui.QLabel('Start')
self.lab_end = QtGui.QLabel('End')
self.lab_total = QtGui.QLabel('Total')
self.lab_time = QtGui.QLabel(u'\u0394t(sec)')
self.edi_bat_start = QtGui.QLineEdit ( str( cp.bat_data_start.value() ) )
self.edi_bat_end = QtGui.QLineEdit ( str( cp.bat_data_end .value() ) )
self.edi_bat_total = QtGui.QLineEdit ( str( cp.bat_data_total.value() ) )
self.edi_bat_time = QtGui.QLineEdit ( str( cp.bat_data_time .value() ) )
self.but_path = QtGui.QPushButton('File:')
self.but_plot = QtGui.QPushButton('img-Plot')
self.but_tspl = QtGui.QPushButton('t-Plot')
self.but_brow = QtGui.QPushButton('Browse')
self.but_scan = QtGui.QPushButton('Scan')
self.but_aver = QtGui.QPushButton('Average')
self.but_status = QtGui.QPushButton('Check status')
self.but_remove = QtGui.QPushButton('Remove')
self.table_scan = GUIFilesStatusTable (parent=self, list_of_files=fnm.get_list_of_files_data_scan())
self.table_aver = GUIFilesStatusTable (parent=self, list_of_files=fnm.get_list_of_files_data_aver())
#self.table_aver = GUIFilesStatusTable (parent=self, list_of_files=fnm.get_list_of_files_data_aver_short())
#self.table_scan.setMinimumHeight(285)
#self.table_scan.table.setFixedWidth(self.table_scan.table.horizontalHeader().length() + 4)
#self.table_scan.table.setFixedHeight(self.table_scan.table.verticalHeader().length() + 29)
self.grid = QtGui.QGridLayout()
self.grid_row = 1
self.grid.addWidget(self.cbx_data, self.grid_row, 0, 1, 6)
self.grid.addWidget(self.but_path, self.grid_row+1, 0)
self.grid.addWidget(self.edi_path, self.grid_row+1, 1, 1, 7)
self.grid.addWidget(self.cbx_all_chunks,self.grid_row+2, 1, 1, 6)
self.grid.addWidget(self.lab_batch, self.grid_row+3, 0)
self.grid.addWidget(self.lab_status, self.grid_row+3, 1, 1, 2)
self.grid.addWidget(self.lab_start, self.grid_row+3, 3)
self.grid.addWidget(self.lab_end, self.grid_row+3, 4)
self.grid.addWidget(self.lab_total, self.grid_row+3, 5)
self.grid.addWidget(self.lab_time, self.grid_row+3, 6)
self.grid.addWidget(self.but_scan, self.grid_row+4, 0)
self.grid.addWidget(self.but_status, self.grid_row+4, 1, 2, 2)
self.grid.addWidget(self.edi_bat_start, self.grid_row+4, 3)
self.grid.addWidget(self.edi_bat_end, self.grid_row+4, 4)
self.grid.addWidget(self.edi_bat_total, self.grid_row+4, 5)
self.grid.addWidget(self.edi_bat_time, self.grid_row+4, 6, 1, 2)
self.grid.addWidget(self.but_aver, self.grid_row+5, 0)
self.grid.addWidget(self.but_brow, self.grid_row+5, 3)
self.grid.addWidget(self.but_plot, self.grid_row+5, 4)
self.grid.addWidget(self.but_tspl, self.grid_row+5, 5)
self.grid.addWidget(self.but_remove, self.grid_row+5, 7)
self.grid.addWidget(self.table_scan, self.grid_row+6, 0, 7, 8)
self.grid.addWidget(self.table_aver, self.grid_row+13,0, 4, 8)
self.connect(self.but_path, QtCore.SIGNAL('clicked()'), self.on_but_path )
self.connect(self.but_plot, QtCore.SIGNAL('clicked()'), self.on_but_plot )
self.connect(self.but_tspl, QtCore.SIGNAL('clicked()'), self.on_but_tspl )
self.connect(self.but_brow, QtCore.SIGNAL('clicked()'), self.on_but_brow )
self.connect(self.but_aver, QtCore.SIGNAL('clicked()'), self.on_but_aver )
self.connect(self.but_scan, QtCore.SIGNAL('clicked()'), self.on_but_scan )
self.connect(self.but_status, QtCore.SIGNAL('clicked()'), self.on_but_status )
self.connect(self.but_remove, QtCore.SIGNAL('clicked()'), self.on_but_remove )
self.connect(self.edi_bat_start, QtCore.SIGNAL('editingFinished()'), self.on_edi_bat_start )
self.connect(self.edi_bat_end, QtCore.SIGNAL('editingFinished()'), self.on_edi_bat_end )
self.connect(self.cbx_data, QtCore.SIGNAL('stateChanged(int)'), self.on_cbx )
self.connect(self.cbx_all_chunks,QtCore.SIGNAL('stateChanged(int)'), self.on_cbx_all_chunks )
self.setLayout(self.grid)
self.showToolTips()
self.setStyle()
self.setButtonState()
def cfg_file_header_for_data_aver(self):
self.cfg_file_header( fnm.path_data_xtc_cond(), \
cp.bat_data_start.value() - 1, \
cp.bat_data_end.value() - cp.bat_data_start.value() + 1 )
def cfg_file_header_for_data_aver (self) :
self.cfg_file_header( fnm.path_data_xtc_cond(), \
cp.bat_data_start.value() - 1, \
cp.bat_data_end.value() - cp.bat_data_start.value() + 1 )
