def cfg_file_body_for_peds_aver(self) :
txt_cfg_body = '#Module parameters'
self.ind = 0
for det_name in cp.list_of_dets_selected() :
lst_tepes, lst_srcs = cp.blsp.list_of_types_and_sources_for_detector(det_name)
list_path_peds_ave = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_srcs)
list_path_peds_rms = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_srcs)
list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)
if self.do_test_print : print 'Detector selected: %10s' % (det_name), ' sources:', lst_srcs
for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
self.ind += 1
#print self.ind, self.source, self.fname_ave, self.fname_rms
# list_of_dets = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal2000', 'Opal4000', 'Acqiris']
#if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
#elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd()
elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_acqiris()
elif det_name == cp.list_of_dets[8] : self.print_warning()
else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
def make_psana_cfg_file_for_peds_aver_princeton(self):
self.path_in = apputils.AppDataPath(
'CalibManager/scripts/psana-peds-aver-princeton.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {
'FNAME_XTC': str(fnm.path_to_xtc_files_for_run()),
'SKIP': str(cp.bat_dark_start.value() - 1),
'EVENTS':
str(cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'FNAME_PEDS_AVE': fnm.path_peds_ave(),
'FNAME_PEDS_RMS': fnm.path_peds_rms()
}
self.d_subs['FNAME_HOTPIX_MASK'] = fnm.path_hotpix_mask()
self.d_subs['HOTPIX_THRESHOLD_ADU'] = str(cp.mask_hot_thr.value())
#if cp.mask_hot_is_used.value() :
# self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#else :
# self.d_subs['FNAME_HOTPIX_MASK' ] = ''
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'
self.print_substitution_dict()
self.make_cfg_file()
def get_list_of_deploy_commands_and_sources(self):
"""Get list of deploy commands for all detectors of the same type"""
self.exportLocalPars()
#cp.blsp.print_list_of_types_and_sources()
list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors()
list_of_files = gu.get_list_of_files_for_list_of_insets( fnm.path_peds_ave(), list_of_sources )
list_of_deploy_commands = []
for file, type, source in zip(list_of_files, list_of_types, list_of_sources) :
src = source
pos1 = type.find('::')
typ = type[:pos1] + '::CalibV1'
fname = '%s-%s.data' % ( self.str_run_from.lstrip('0'),
self.str_run_to .lstrip('0') )
calib_path = os.path.join(self.calib_dir.value(), typ, src, 'pedestals', fname)
cmd = 'cp %s %s' % (file, calib_path)
list_of_deploy_commands.append(cmd)
return list_of_deploy_commands, list_of_sources
def on_but_plot(self):
self.exportLocalPars()
logger.debug('on_but_plot', __name__)
try :
cp.plotimgspe.close()
try : del cp.plotimgspe
except : pass
except :
self.arr = None
self.img_arr = None
msg = 'Plot image for %s' % self.det_name.value()
logger.info(msg, __name__)
list_of_fnames = cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
#print 'list_of_fnames = ', list_of_fnames
if list_of_fnames != [] :
fname = list_of_fnames[0]
if len(list_of_fnames) > 1 :
fname = gu.selectFromListInPopupMenu(list_of_fnames)
msg = 'Selected file to plot: %s' % fname
logger.info(msg, __name__)
self.arr = gu.get_array_from_file( fname )
#print self.arr.shape,'\n', self.arr.shape
if self.det_name.value() == cp.list_of_dets[0] : # CSAPD, shape = (5920,388)
self.arr.shape = (32*185,388)
self.img_arr = cspadimg.get_cspad_raw_data_array_image(self.arr)
elif self.det_name.value() == cp.list_of_dets[1] : # CSAPD2x2
self.arr.shape = (185,388,2)
self.img_arr = cspad2x2img.get_cspad2x2_non_corrected_image_for_raw_data_array(self.arr)
elif self.det_name.value() == cp.list_of_dets[2] : # Camera
pass
elif self.det_name.value() == cp.list_of_dets[3] : # Princeton
self.img_arr = self.arr
elif self.det_name.value() == cp.list_of_dets[4] : # pnCCD
pass
if self.img_arr == None :
msg = 'self.img_arr == None'
return
#print arr.shape,'\n', arr.shape
cp.plotimgspe = PlotImgSpe(None, self.img_arr, ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe = PlotImgSpe(None, self.img_arr, ifname=fnm.path_peds_ave(), ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe.setParent(self)
cp.plotimgspe.move(cp.guimain.pos().__add__(QtCore.QPoint(720,120)))
cp.plotimgspe.show()
def cfg_file_body_for_peds_aver(self) :
txt_cfg_body = '#Module parameters'
self.ind = 0
for det_name in cp.list_of_dets_selected() :
lst_tepes, lst_srcs = cp.blsp.list_of_types_and_sources_for_detector(det_name)
list_path_peds_ave = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_srcs)
list_path_peds_rms = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_srcs)
list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)
if self.do_test_print : print 'Detector selected: %10s' % (det_name), ' sources:', lst_srcs
for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
self.ind += 1
#print self.ind, self.source, self.fname_ave, self.fname_rms
# list_of_dets = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal2000', 'Opal4000', 'Acqiris']
#if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
#elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
#elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_acqiris()
elif det_name == cp.list_of_dets[8] : self.print_warning()
else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
def get_list_of_deploy_commands_and_sources_dark(str_run_number,
str_run_range):
"""Get list of deploy commands for all detectors of the same type"""
cp.str_run_number.setValue(str_run_number)
#cp.blsp.print_list_of_types_and_sources()
list_of_dtypes, list_of_sources, list_of_ctypes = cp.blsp.list_of_types_and_sources_for_selected_detectors(
)
# list_of_dtypes : ['CsPad::DataV1', 'CsPad::DataV1']
# list_of_sources : ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']
# list_of_ctypes : ['CsPad::CalibV1', 'CsPad::CalibV1']
#print 'list_of_dtypes :', list_of_dtypes
#print 'list_of_sources:', list_of_sources
#print 'list_of_ctypes :', list_of_ctypes
list_of_deploy_commands = get_list_of_deploy_commands_for_calibtype(
list_of_ctypes, list_of_dtypes, list_of_sources, fnm.path_peds_ave(),
'pedestals', str_run_range)
list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(
list_of_ctypes, list_of_dtypes, list_of_sources, fnm.path_peds_rms(),
'pixel_rms', str_run_range)
if cp.dark_deploy_hotpix.value():
list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(
list_of_ctypes, list_of_dtypes, list_of_sources,
fnm.path_hotpix_mask(), 'pixel_status', str_run_range)
return list_of_deploy_commands, list_of_sources
def status_for_pedestal_file(self):
self.exportLocalPars() # export run_number to cp.str_run_number
fname = fnm.path_peds_ave()
status = os.path.lexists(fname)
logger.info(
'Status: pedestal file ' + fname + ' ' + self.dict_status[status],
__name__)
return status
def get_list_of_files_peds_aver(self) :
self.exportLocalPars() # export run_number to cp.str_run_number
lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors ()
list_of_fnames = fnm.get_list_of_files_peds_aver() \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_of_srcs)
return list_of_fnames
def get_list_of_files_peds_aver(self):
self.exportLocalPars() # export run_number to cp.str_run_number
lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors()
list_of_fnames = fnm.get_list_of_files_peds_aver() \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_of_srcs)
return list_of_fnames
def make_psana_cfg_file_for_peds_aver_cspad(
self, module='cspad_mod.CsPadPedestals'):
self.path_in = apputils.AppDataPath(
'CalibManager/scripts/psana-section-psana.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
modules = ''
for i in range(len(cp.blsp.list_of_sources)):
modules += '%s:%i ' % (module, i)
#print 'List of modules: %s' % modules
self.d_subs = {
'FNAME_XTC': str(fnm.path_to_xtc_files_for_run()),
'SKIP': str(cp.bat_dark_start.value() - 1),
'EVENTS':
str(cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1),
'MODULES': modules
}
self.print_substitution_dict()
self.make_cfg_file()
#Add a few similar modules in loop
self.path_in = apputils.AppDataPath(
'CalibManager/scripts/psana-section-module-cspad-peds.cfg').path()
list_of_ave = cp.blsp.get_list_of_files_for_all_sources(
fnm.path_peds_ave())
list_of_rms = cp.blsp.get_list_of_files_for_all_sources(
fnm.path_peds_rms())
for i, (source, fname_ave, fname_rms) in enumerate(
zip(cp.blsp.list_of_sources, list_of_ave, list_of_rms)):
mod = '%s:%i' % (module, i)
#print ' Add module with pars: ', mod, source, fname_ave, fname_rms
self.d_subs = {
'MODULE': mod,
'DETINFO': source,
'FNAME_PEDS_AVE': fname_ave,
'FNAME_PEDS_RMS': fname_rms
}
#for item in self.d_subs.items() :
# print '%20s : %s' % item
self.make_cfg_file(fout_mode='a')
def cfg_file_body_for_peds_aver(self) :
txt_cfg_body = '#Module parameters'
self.ind = 0
for det_name in cp.list_of_dets_selected() :
lst_types, lst_srcs, lst_ctypes = cp.blsp.list_of_types_and_sources_for_detector(det_name)
list_path_peds_ave = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_srcs)
list_path_peds_rms = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_srcs)
list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)
if self.do_test_print : print 'Detector selected: %10s' % (det_name), ' sources:', lst_srcs
for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
self.ind += 1
#print self.ind, self.source, self.fname_ave, self.fname_rms
#list_of_dets = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal1000', 'Opal2000', 'Opal4000', 'Opal8000', \
# 'OrcaFl40', 'Epix', 'Epix10k', 'Epix100a', 'Fccd960', 'Andor', 'Acqiris']
#if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
#elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
#elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[8] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[9] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[10]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[11]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[12]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[13]: self.add_cfg_module_peds_aver_camera(out_dtype='int')
elif det_name == cp.list_of_dets[14]: self.add_cfg_module_peds_aver_andor()
elif det_name == cp.list_of_dets[15]: self.add_cfg_module_peds_aver_acqiris()
elif det_name == cp.list_of_dets[16]: self.print_warning()
else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
if self.ind > 0 : return True
msg = 'Selected detectors NOT FOUND in the list of keys in xtc scan log file !!!'
logger.warning(msg, __name__)
return False
def cfg_file_body_for_peds_aver(self) :
txt_cfg_body = '#Module parameters'
self.ind = 0
for det_name in cp.list_of_dets_selected() :
lst_types, lst_srcs, lst_ctypes = cp.blsp.list_of_types_and_sources_for_detector(det_name)
list_path_peds_ave = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_srcs)
list_path_peds_rms = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_srcs)
list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)
if self.do_test_print : print 'Detector selected: %10s' % (det_name), ' sources:', lst_srcs
for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
self.ind += 1
#print self.ind, self.source, self.fname_ave, self.fname_rms
#list_of_dets = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal1000', 'Opal2000', 'Opal4000', 'Opal8000', \
# 'OrcaFl40', 'Epix', 'Epix10k', 'Epix100a', 'Fccd960', 'Andor', 'Acqiris']
#if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
#elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
if det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
#elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[8] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[9] : self.add_cfg_module_peds_aver_camera()
elif det_name == cp.list_of_dets[10]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[11]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[12]: self.add_cfg_module_peds_aver_epix()
elif det_name == cp.list_of_dets[13]: self.add_cfg_module_peds_aver_camera(out_dtype='int')
elif det_name == cp.list_of_dets[14]: self.add_cfg_module_peds_aver_andor()
elif det_name == cp.list_of_dets[15]: self.add_cfg_module_peds_aver_acqiris()
elif det_name == cp.list_of_dets[16]: self.print_warning()
else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
if self.ind > 0 : return True
msg = 'Selected detectors NOT FOUND in the list of keys in xtc scan log file !!!'
logger.warning(msg, __name__)
return False
def get_list_of_deploy_commands_and_sources(self):
"""Get list of deploy commands for all detectors of the same type"""
self.exportLocalPars()
#cp.blsp.print_list_of_types_and_sources()
list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors(
)
# list_of_types : ['CsPad::DataV1', 'CsPad::DataV1']
# list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']
list_of_deploy_commands = self.get_list_of_deploy_commands_for_calibtype(
list_of_types, list_of_sources, fnm.path_peds_ave(), 'pedestals')
if cp.dark_deploy_hotpix.value():
list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(
list_of_types, list_of_sources, fnm.path_hotpix_mask(),
'pixel_status')
return list_of_deploy_commands, list_of_sources
def make_psana_cfg_file_for_peds_aver_cspad (self, module='cspad_mod.CsPadPedestals') :
self.path_in = apputils.AppDataPath('CalibManager/scripts/psana-section-psana.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
modules = ''
for i in range( len(cp.blsp.list_of_sources) ) : modules += '%s:%i ' % (module, i)
#print 'List of modules: %s' % modules
self.d_subs = {'FNAME_XTC' : str(fnm.path_to_xtc_files_for_run()),
'SKIP' : str( cp.bat_dark_start.value() - 1 ),
'EVENTS' : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
'MODULES' : modules
}
self.print_substitution_dict()
self.make_cfg_file()
#Add a few similar modules in loop
self.path_in = apputils.AppDataPath('CalibManager/scripts/psana-section-module-cspad-peds.cfg').path()
list_of_ave = cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave())
list_of_rms = cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
for i, (source, fname_ave, fname_rms) in enumerate( zip(cp.blsp.list_of_sources, list_of_ave, list_of_rms) ) :
mod = '%s:%i' % (module, i)
#print ' Add module with pars: ', mod, source, fname_ave, fname_rms
self.d_subs = {'MODULE' : mod,
'DETINFO' : source,
'FNAME_PEDS_AVE' : fname_ave,
'FNAME_PEDS_RMS' : fname_rms
}
#for item in self.d_subs.items() :
# print '%20s : %s' % item
self.make_cfg_file(fout_mode='a')
def make_psana_cfg_file_for_peds_aver_princeton (self) :
self.path_in = apputils.AppDataPath('CalibManager/scripts/psana-peds-aver-princeton.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {'FNAME_XTC' : str(fnm.path_to_xtc_files_for_run()),
'SKIP' : str( cp.bat_dark_start.value() - 1 ),
'EVENTS' : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FNAME_PEDS_AVE' : fnm.path_peds_ave(),
'FNAME_PEDS_RMS' : fnm.path_peds_rms()
}
self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#if cp.mask_hot_is_used.value() :
# self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#else :
# self.d_subs['FNAME_HOTPIX_MASK' ] = ''
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'
self.print_substitution_dict()
self.make_cfg_file()
def status_for_pedestal_file(self) :
self.exportLocalPars() # export run_number to cp.str_run_number
fname = fnm.path_peds_ave()
status = os.path.lexists(fname)
logger.info('Status: pedestal file ' + fname + ' ' + self.dict_status[status], __name__)
return status
def get_list_of_files_dark_expected(self):
lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors()
return fnm.get_list_of_files_peds() \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_of_srcs)
def get_list_of_files_dark_expected(self) :
lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors()
return fnm.get_list_of_files_peds() \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(), lst_of_srcs) \
+ gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_of_srcs)
def get_list_of_files_peds(self) :
list_of_fnames = fnm.get_list_of_files_peds() \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
list_of_fnames.append(fnm.path_hotpix_mask())
return list_of_fnames
def get_list_of_files_peds(self):
list_of_fnames = fnm.get_list_of_files_peds() \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
list_of_fnames.append(fnm.path_hotpix_mask())
return list_of_fnames
def get_list_of_deploy_commands_and_sources(self):
"""Get list of deploy commands for all detectors of the same type"""
self.exportLocalPars()
#cp.blsp.print_list_of_types_and_sources()
list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors()
# list_of_types : ['CsPad::DataV1', 'CsPad::DataV1']
# list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']
list_of_deploy_commands = self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_ave(), 'pedestals')
list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_rms(), 'pixel_rms')
if cp.dark_deploy_hotpix.value() :
list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_hotpix_mask(), 'pixel_status')
return list_of_deploy_commands, list_of_sources
def on_but_plot(self):
self.exportLocalPars()
logger.debug('on_but_plot', __name__)
try:
cp.plotimgspe.close()
try:
del cp.plotimgspe
except:
pass
except:
self.arr = None
self.img_arr = None
msg = 'Plot image for %s' % self.det_name.value()
logger.info(msg, __name__)
list_of_fnames = cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
#print 'list_of_fnames = ', list_of_fnames
if list_of_fnames != []:
fname = list_of_fnames[0]
if len(list_of_fnames) > 1:
fname = gu.selectFromListInPopupMenu(list_of_fnames)
msg = 'Selected file to plot: %s' % fname
logger.info(msg, __name__)
self.arr = gu.get_array_from_file(fname)
#print self.arr.shape,'\n', self.arr.shape
if self.det_name.value(
) == cp.list_of_dets[0]: # CSAPD, shape = (5920,388)
self.arr.shape = (32 * 185, 388)
self.img_arr = cspadimg.get_cspad_raw_data_array_image(
self.arr)
elif self.det_name.value() == cp.list_of_dets[1]: # CSAPD2x2
self.arr.shape = (185, 388, 2)
self.img_arr = cspad2x2img.get_cspad2x2_non_corrected_image_for_raw_data_array(
self.arr)
elif self.det_name.value() == cp.list_of_dets[2]: # Camera
pass
elif self.det_name.value() == cp.list_of_dets[3]: # Princeton
self.img_arr = self.arr
elif self.det_name.value() == cp.list_of_dets[4]: # pnCCD
pass
if self.img_arr == None:
msg = 'self.img_arr == None'
return
#print arr.shape,'\n', arr.shape
cp.plotimgspe = PlotImgSpe(None,
self.img_arr,
ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe = PlotImgSpe(None, self.img_arr, ifname=fnm.path_peds_ave(), ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe.setParent(self)
cp.plotimgspe.move(cp.guimain.pos().__add__(QtCore.QPoint(
720, 120)))
cp.plotimgspe.show()
def get_list_of_deploy_commands_and_sources_dark(str_run_number, str_run_range):
"""Get list of deploy commands for all detectors of the same type"""
cp.str_run_number.setValue(str_run_number)
#cp.blsp.print_list_of_types_and_sources()
list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors()
# list_of_types : ['CsPad::DataV1', 'CsPad::DataV1']
# list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']
list_of_deploy_commands = get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_ave(), 'pedestals', str_run_range)
list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_rms(), 'pixel_rms', str_run_range)
if cp.dark_deploy_hotpix.value() :
list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_hotpix_mask(), 'pixel_status', str_run_range)
return list_of_deploy_commands, list_of_sources
def get_list_of_files_peds_aver(self):
self.exportLocalPars() # export run_number to cp.str_run_number
list_of_fnames = fnm.get_list_of_files_peds_aver() \
+ blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
return list_of_fnames
def get_list_of_files_peds_aver(self) :
self.exportLocalPars() # export run_number to cp.str_run_number
list_of_fnames = fnm.get_list_of_files_peds_aver() \
+ blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
+ blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
return list_of_fnames