def setup_context(freq=False):
loaded_data = MuonLoadData()
loaded_data.get_main_field_direction = mock.MagicMock(
return_value='transverse')
data_context = MuonDataContext(load_data=loaded_data)
gui_context = MuonGuiContext()
group_context = MuonGroupPairContext(
data_context.check_group_contains_valid_detectors)
corrections_context = CorrectionsContext(loaded_data)
phase_table_context = PhaseTableContext()
freq_context = FrequencyContext()
plot_panes_context = PlotPanesContext()
if freq:
return FrequencyDomainAnalysisContext(
muon_data_context=data_context,
muon_group_context=group_context,
muon_gui_context=gui_context,
muon_phase_context=phase_table_context,
corrections_context=corrections_context,
fitting_context=BasicFittingContext(
allow_double_pulse_fitting=True),
frequency_context=freq_context,
plot_panes_context=plot_panes_context)
else:
return DataAnalysisContext(muon_data_context=data_context,
muon_group_context=group_context,
muon_gui_context=gui_context,
corrections_context=corrections_context,
muon_phase_context=phase_table_context,
fitting_context=TFAsymmetryFittingContext(
allow_double_pulse_fitting=True),
results_context=ResultsContext(),
model_fitting_context=ModelFittingContext(),
plot_panes_context=plot_panes_context)
def setup_context_for_tests(parent_object):
parent_object.loaded_data = MuonLoadData()
parent_object.loaded_data.get_main_field_direction = mock.MagicMock(
return_value='transverse')
parent_object.data_context = MuonDataContext(
load_data=parent_object.loaded_data)
parent_object.gui_context = MuonGuiContext()
parent_object.group_context = MuonGroupPairContext(
parent_object.data_context.check_group_contains_valid_detectors)
parent_object.corrections_context = CorrectionsContext(
parent_object.loaded_data)
parent_object.phase_table_context = PhaseTableContext()
parent_object.fitting_context = TFAsymmetryFittingContext(
allow_double_pulse_fitting=True)
parent_object.results_context = ResultsContext()
parent_object.plot_panes_context = PlotPanesContext()
parent_object.model_fitting_context = ModelFittingContext()
parent_object.context = DataAnalysisContext(
muon_data_context=parent_object.data_context,
muon_group_context=parent_object.group_context,
muon_gui_context=parent_object.gui_context,
muon_phase_context=parent_object.phase_table_context,
corrections_context=parent_object.corrections_context,
fitting_context=parent_object.fitting_context,
results_context=parent_object.results_context,
model_fitting_context=parent_object.model_fitting_context,
plot_panes_context=parent_object.plot_panes_context)
def setup_context(freq=False):
loaded_data = MuonLoadData()
loaded_data.get_main_field_direction = mock.MagicMock(
return_value='transverse')
data_context = MuonDataContext(load_data=loaded_data)
gui_context = MuonGuiContext()
group_context = MuonGroupPairContext(
data_context.check_group_contains_valid_detectors)
phase_table_context = PhaseTableContext()
fitting_context = FittingContext()
freq_context = FrequencyContext()
if freq:
return FrequencyDomainAnalysisContext(
muon_data_context=data_context,
muon_group_context=group_context,
muon_gui_context=gui_context,
muon_phase_context=phase_table_context,
fitting_context=fitting_context,
frequency_context=freq_context)
else:
return DataAnalysisContext(muon_data_context=data_context,
muon_group_context=group_context,
muon_gui_context=gui_context,
muon_phase_context=phase_table_context,
fitting_context=fitting_context)
def setup_context_for_tests(parent_object):
parent_object.loaded_data = MuonLoadData()
parent_object.loaded_data.get_main_field_direction = mock.MagicMock(return_value='transverse')
parent_object.data_context = MuonDataContext(load_data=parent_object.loaded_data)
parent_object.gui_context = MuonGuiContext()
parent_object.group_context = MuonGroupPairContext(parent_object.data_context.check_group_contains_valid_detectors)
parent_object.phase_table_context = PhaseTableContext()
parent_object.fitting_context = FittingContext()
parent_object.context = MuonContext(muon_data_context=parent_object.data_context, muon_group_context=parent_object.group_context,
muon_gui_context=parent_object.gui_context, muon_phase_context=parent_object.phase_table_context,
fitting_context=parent_object.fitting_context)
def setup_context():
loaded_data = MuonLoadData()
loaded_data.get_main_field_direction = mock.MagicMock(
return_value='transverse')
data_context = MuonDataContext(loaded_data)
gui_context = MuonGuiContext()
group_context = MuonGroupPairContext(
data_context.check_group_contains_valid_detectors)
phase_table_context = PhaseTableContext()
return MuonContext(muon_data_context=data_context,
muon_group_context=group_context,
muon_gui_context=gui_context,
muon_phase_context=phase_table_context)
def setUp(self):
self.context = PhaseTableContext()
class PhaseTableContextTest(unittest.TestCase):
def setUp(self):
self.context = PhaseTableContext()
def test_initialised_with_default_values(self):
self.assertEquals(self.context.options_dict, default_dict)
self.assertEquals(self.context.phase_tables, [])
def test_add_phase_table_adds_phase_table_name_to_list(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_table')
self.context.add_phase_table(name)
self.assertEquals(self.context.phase_tables, [name])
def test_get_phase_table_list_retrieves_all_tables_wth_correct_instrument(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_table')
self.context.add_phase_table(name)
name = create_workspace_wrapper_stub_object('EMU22222_phase_table')
self.context.add_phase_table(name)
name = create_workspace_wrapper_stub_object('MUSR33333_phase_table')
self.context.add_phase_table(name)
self.assertEquals(self.context.get_phase_table_list('MUSR'), ['MUSR22222_phase_table', 'MUSR33333_phase_table'])
def test_add_phase_quad_adds_phase_quad_name_to_list(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_quad')
self.context.add_phase_quad(name)
self.assertEquals(self.context.phase_quad, [name])
def test_get_phase_quad_returns_phase_quad_name_if_run_and_instrument_match(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_quad')
self.context.add_phase_quad(name)
self.assertEquals(self.context.get_phase_quad('MUSR', '22222'), ['MUSR22222_phase_quad'])
def __init__(self, parent=None):
super(MuonAnalysisGui, self).__init__(parent)
self.setAttribute(QtCore.Qt.WA_DeleteOnClose)
self.setFocusPolicy(QtCore.Qt.StrongFocus)
self.setObjectName("MuonAnalysis2")
self.current_tab = ''
try:
check_facility()
except AttributeError as error:
self.warning_popup(error.args[0])
# initialise the data storing classes of the interface
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext('Muon Data', self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext(
self.data_context.check_group_contains_valid_detectors)
self.phase_context = PhaseTableContext()
self.fitting_context = FittingContext()
self.context = DataAnalysisContext(
muon_data_context=self.data_context,
muon_gui_context=self.gui_context,
muon_group_context=self.group_pair_context,
fitting_context=self.fitting_context,
muon_phase_context=self.phase_context)
# create the Dockable plot widget
self.fitting_tab = FittingTabWidget(self.context, self)
self.plot_widget = PlotWidget(
self.context,
self.fitting_tab.fitting_tab_presenter.get_selected_fit_workspaces,
parent=self)
self.dockable_plot_widget_window = PlottingDockWidget(
parent=self, plotting_widget=self.plot_widget.view)
self.dockable_plot_widget_window.setMinimumWidth(575)
# Add dock widget to main Muon analysis window
self.addDockWidget(QtCore.Qt.RightDockWidgetArea,
self.dockable_plot_widget_window)
# Need this line to stop the bug where the dock window snaps back to its original size after resizing.
# 0 argument is arbitrary and has no effect on fit widget size
# This is a qt bug reported at (https://bugreports.qt.io/browse/QTBUG-65592)
if QT_VERSION >= LooseVersion("5.6"):
self.resizeDocks({self.dockable_plot_widget_window}, {1},
QtCore.Qt.Horizontal)
self.disable_notifier = GenericObservable()
self.disable_observer = GenericObserver(
self.disable_notifier.notify_subscribers)
self.enable_notifier = GenericObservable()
self.enable_observer = GenericObserver(
self.enable_notifier.notify_subscribers)
# set up other widgets
self.load_widget = LoadWidget(self.loaded_data, self.context, self)
self.home_tab = HomeTabWidget(self.context, self)
self.grouping_tab_widget = GroupingTabWidget(self.context)
self.phase_tab = PhaseTabWidget(self.context, self)
self.seq_fitting_tab = SeqFittingTabWidget(
self.context, self.fitting_tab.fitting_tab_model, self)
self.results_tab = ResultsTabWidget(self.context.fitting_context,
self.context, self)
self.setup_tabs()
self.help_widget = HelpWidget("Muon Analysis 2")
central_widget = QtWidgets.QWidget()
vertical_layout = QtWidgets.QVBoxLayout()
vertical_layout.addWidget(self.load_widget.load_widget_view)
vertical_layout.addWidget(self.tabs)
vertical_layout.addWidget(self.help_widget.view)
central_widget.setLayout(vertical_layout)
self.setCentralWidget(central_widget)
self.setWindowTitle(self.context.window_title)
self.setup_load_observers()
self.setup_gui_variable_observers()
self.setup_grouping_changed_observers()
self.setup_instrument_changed_notifier()
self.setup_group_calculation_enable_notifier()
self.setup_group_calculation_disabler_notifier()
self.setup_on_load_enabler()
self.setup_on_load_disabler()
self.setup_phase_quad_changed_notifier()
self.setup_phase_table_changed_notifier()
self.setup_fitting_notifier()
self.setup_on_recalulation_finished_notifier()
self.context.data_context.message_notifier.add_subscriber(
self.grouping_tab_widget.group_tab_presenter.message_observer)
self.setup_disable_notifier()
self.setup_enable_notifier()
def setUp(self):
self.context = PhaseTableContext()
class PhaseTableContextTest(unittest.TestCase):
def setUp(self):
self.context = PhaseTableContext()
def test_initialised_with_default_values(self):
self.assertEqual(self.context.options_dict, default_dict)
self.assertEqual(self.context.phase_tables, [])
def test_add_phase_table_adds_phase_table_name_to_list(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_table')
self.context.add_phase_table(name)
self.assertEqual(self.context.phase_tables, [name])
def test_get_phase_table_list_retrieves_all_tables_wth_correct_instrument(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_table')
self.context.add_phase_table(name)
name = create_workspace_wrapper_stub_object('EMU22222_phase_table')
self.context.add_phase_table(name)
name = create_workspace_wrapper_stub_object('MUSR33333_phase_table')
self.context.add_phase_table(name)
self.assertEqual(self.context.get_phase_table_list('MUSR'), ['MUSR22222_phase_table', 'MUSR33333_phase_table'])
def test_add_phase_quad_adds_phase_quad_name_to_list(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_quad')
self.context.add_phase_quad(name)
self.assertEqual(self.context.phase_quad, [name])
def test_get_phase_quad_returns_phase_quad_name_if_run_and_instrument_match(self):
name = create_workspace_wrapper_stub_object('MUSR22222_phase_quad')
self.context.add_phase_quad(name)
self.assertEqual(self.context.get_phase_quad('MUSR', '22222'), ['MUSR22222_phase_quad'])
def __init__(self, parent=None):
super(FrequencyAnalysisGui, self).__init__(parent)
self.setFocusPolicy(QtCore.Qt.StrongFocus)
try:
check_facility()
except AttributeError as error:
self.warning_popup(error.args[0])
# initialise the data storing classes of the interface
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext(self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext(
self.data_context.check_group_contains_valid_detectors)
self.phase_context = PhaseTableContext()
self.context = MuonContext(muon_data_context=self.data_context,
muon_gui_context=self.gui_context,
muon_group_context=self.group_pair_context,
muon_phase_context=self.phase_context)
# construct all the widgets.
self.load_widget = LoadWidget(self.loaded_data, self.context, self)
self.grouping_tab_widget = GroupingTabWidget(self.context)
self.home_tab = HomeTabWidget(self.context, self)
self.phase_tab = PhaseTabWidget(self.context, self)
self.transform = TransformWidget(self.context,
FFTWidget,
MaxEntWidget,
parent=self)
self.setup_tabs()
self.help_widget = HelpWidget("Frequency Domain Analysis")
central_widget = QtWidgets.QWidget()
vertical_layout = QtWidgets.QVBoxLayout()
vertical_layout.addWidget(self.load_widget.load_widget_view)
vertical_layout.addWidget(self.tabs)
vertical_layout.addWidget(self.help_widget.view)
central_widget.setLayout(vertical_layout)
self.setCentralWidget(central_widget)
self.setWindowTitle("Frequency Domain Analysis")
self.setup_load_observers()
self.setup_gui_variable_observers()
self.setup_alpha_recalculated_observers()
self.setup_grouping_changed_observers()
self.setup_instrument_changed_notifier()
self.setup_group_calculation_enable_notifer()
self.setup_group_calculation_disabler_notifer()
self.setup_on_load_enabler()
self.setup_on_load_disabler()
self.setup_phase_quad_changed_notifer()
self.setup_phase_table_changed_notifier()
self.context.data_context.message_notifier.add_subscriber(
self.grouping_tab_widget.group_tab_presenter.message_observer)
def __init__(self, parent=None):
super(MuonAnalysisGui, self).__init__(parent)
self.setFocusPolicy(QtCore.Qt.StrongFocus)
try:
check_facility()
except AttributeError as error:
self.warning_popup(error.args[0])
# initialise the data storing classes of the interface
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext('Muon Data', self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext(
self.data_context.check_group_contains_valid_detectors)
self.phase_context = PhaseTableContext()
self.fitting_context = FittingContext()
self.context = MuonContext(muon_data_context=self.data_context,
muon_gui_context=self.gui_context,
muon_group_context=self.group_pair_context,
muon_phase_context=self.phase_context,
fitting_context=self.fitting_context,
workspace_suffix=' MA')
# create the dockable widget
self.dockable_plot_widget = PlottingWidget(self.context)
self.dockable_plot_widget_window = PlottingDockWidget(
parent=self, plotting_widget=self.dockable_plot_widget.view)
self.dockable_plot_widget_window.setMinimumWidth(575)
# # add dock widget to main Muon analysis window
self.addDockWidget(QtCore.Qt.RightDockWidgetArea,
self.dockable_plot_widget_window)
# set up other widgets
self.load_widget = LoadWidget(self.loaded_data, self.context, self)
self.home_tab = HomeTabWidget(self.context, self)
self.grouping_tab_widget = GroupingTabWidget(self.context)
self.phase_tab = PhaseTabWidget(self.context, self)
self.fitting_tab = FittingTabWidget(self.context, self)
self.seq_fitting_tab = SeqFittingTabWidget(
self.context, self.fitting_tab.fitting_tab_model, self)
self.results_tab = ResultsTabWidget(self.context.fitting_context,
self.context, self)
self.setup_tabs()
self.help_widget = HelpWidget("Muon Analysis 2")
central_widget = QtWidgets.QWidget()
vertical_layout = QtWidgets.QVBoxLayout()
vertical_layout.addWidget(self.load_widget.load_widget_view)
vertical_layout.addWidget(self.tabs)
vertical_layout.addWidget(self.help_widget.view)
central_widget.setLayout(vertical_layout)
self.setCentralWidget(central_widget)
self.setWindowTitle(self.context.window_title)
self.setup_load_observers()
self.setup_gui_variable_observers()
self.setup_grouping_changed_observers()
self.setup_instrument_changed_notifier()
self.setup_group_calculation_enable_notifier()
self.setup_group_calculation_disabler_notifier()
self.setup_on_load_enabler()
self.setup_on_load_disabler()
self.setup_phase_quad_changed_notifier()
self.setup_phase_table_changed_notifier()
self.setup_fitting_notifier()
self.setup_on_recalulation_finished_notifier()
self.context.data_context.message_notifier.add_subscriber(
self.grouping_tab_widget.group_tab_presenter.message_observer)
def __init__(self, muon_data_context=MuonDataContext(), muon_gui_context=MuonGuiContext(),
muon_group_context=MuonGroupPairContext(), base_directory='Muon Data', muon_phase_context= PhaseTableContext()):
self._data_context = muon_data_context
self._gui_context = muon_gui_context
self._group_pair_context = muon_group_context
self._phase_context = muon_phase_context
self.base_directory = base_directory
self.gui_context.update({'DeadTimeSource': 'None', 'LastGoodDataFromFile': True, 'selected_group_pair': ''})
def __init__(self, parent=None):
super(FrequencyAnalysisGui, self).__init__(parent)
self.setFocusPolicy(QtCore.Qt.StrongFocus)
try:
check_facility()
except AttributeError as error:
self.warning_popup(error.args[0])
# initialise the data storing classes of the interface
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext('Frequency Domain Data',
self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext(
self.data_context.check_group_contains_valid_detectors)
self.phase_context = PhaseTableContext()
self.fitting_context = FittingContext()
self.frequency_context = FrequencyContext()
self.context = MuonContext(muon_data_context=self.data_context,
muon_gui_context=self.gui_context,
muon_group_context=self.group_pair_context,
muon_phase_context=self.phase_context,
fitting_context=self.fitting_context,
workspace_suffix=' FD',
frequency_context=self.frequency_context)
# create the dockable widget
self.plot_widget = PlotWidget(self.context)
self.dockable_plot_widget_window = PlottingDockWidget(
parent=self, plotting_widget=self.plot_widget.view)
self.dockable_plot_widget_window.setMinimumWidth(575)
# Add dock widget to main Muon analysis window
self.addDockWidget(QtCore.Qt.RightDockWidgetArea,
self.dockable_plot_widget_window)
# Need this line to stop the bug where the dock window snaps back to its original size after resizing.
# This is a qt bug reported at (https://bugreports.qt.io/browse/QTBUG-65592)
if QT_VERSION >= LooseVersion("5.6"):
self.resizeDocks({self.dockable_plot_widget_window}, {40},
QtCore.Qt.Horizontal)
# construct all the widgets.
self.load_widget = LoadWidget(self.loaded_data, self.context, self)
self.grouping_tab_widget = GroupingTabWidget(self.context)
self.home_tab = HomeTabWidget(self.context, self)
self.phase_tab = PhaseTabWidget(self.context, self)
self.transform = TransformWidget(self.context,
FFTWidget,
MaxEntWidget,
parent=self)
self.fitting_tab = FittingTabWidget(self.context, self)
self.results_tab = ResultsTabWidget(self.context.fitting_context,
self.context, self)
self.setup_tabs()
self.help_widget = HelpWidget(self.context.window_title)
central_widget = QtWidgets.QWidget()
vertical_layout = QtWidgets.QVBoxLayout()
vertical_layout.addWidget(self.load_widget.load_widget_view)
vertical_layout.addWidget(self.tabs)
vertical_layout.addWidget(self.help_widget.view)
central_widget.setLayout(vertical_layout)
self.setCentralWidget(central_widget)
self.setWindowTitle(self.context.window_title)
self.setup_load_observers()
self.setup_gui_variable_observers()
self.setup_grouping_changed_observers()
self.setup_instrument_changed_notifier()
self.setup_group_calculation_enable_notifier()
self.setup_group_calculation_disabler_notifier()
self.setup_on_load_enabler()
self.setup_on_load_disabler()
self.setup_phase_quad_changed_notifier()
self.setup_phase_table_changed_notifier()
self.setup_fitting_notifier()
self.setup_on_recalculation_finished_notifier()
self.transform.set_up_calculation_observers(
self.fitting_tab.fitting_tab_presenter.enable_tab_observer,
self.fitting_tab.fitting_tab_presenter.disable_tab_observer)
self.transform.new_data_observer(
self.fitting_tab.fitting_tab_presenter.input_workspace_observer)
self.transform.new_data_observer(
self.plot_widget.presenter.input_workspace_observer)
self.context.data_context.message_notifier.add_subscriber(
self.grouping_tab_widget.group_tab_presenter.message_observer)
