def PopulateMetadata(self, mdh, acquiring=True):
global lastCreator, lastSlideRef
currentSlide[0] = self.slide
creator = self.slide.creator
slideRef = self.slide.reference
sampleNotes = self.slide.notes
#notes = self.tNotes.GetValue()
#sampleNotes = self.tSlideNotes.GetValue()
if not slideRef == lastSlideRef or not creator == lastCreator:
lastCreator = creator
lastSlideRef = slideRef
for f in WantSlideChangeNotification:
f()
#if len(creator) == 0:
# creator = '<none>'
#if len(slideRef) == 0:
# slideRef = '<none>'
#if len(notes) == 0:
# notes = '<none>'
#if len(sampleNotes) == 0:
# sampleNotes = '<none>'
mdh.setEntry('Sample.Creator', creator)
mdh.setEntry('Sample.SlideRef', slideRef)
if len(sampleNotes) > 0:
mdh.setEntry('Sample.Notes', sampleNotes)
#mdh.setEntry('AcquisitionNotes', notes)
# labels = []
# for i in range(self.gLabelling.GetNumberRows()):
# labels.append((self.gLabelling.GetCellValue(i, 0),self.gLabelling.GetCellValue(i, 1)))
mdh.setEntry('Sample.Labelling', [(l.structure, l.dye.shortName) for l in self.slide.labelling.all()])
mdh.setEntry('AcquiringUser', nameUtils.getUsername())
#slide = models.Slide.Get(creator, slideRef)
# if not self.slideExists:
# for struct, label in self.labels:
# l = models.Labelling(slideID=slide, structure=struct, label=label)
# l.notes = sampleNotes
# l.save()
if acquiring:
notes = self.tNotes.GetValue()
mdh.setEntry('Notes', notes)
def PopulateMetadata(self, mdh, acquiring=True):
global lastCreator, lastSlideRef
currentSlide[0] = self.slide
creator = self.slide.creator
slideRef = self.slide.reference
sampleNotes = self.slide.notes
#notes = self.tNotes.GetValue()
#sampleNotes = self.tSlideNotes.GetValue()
if not slideRef == lastSlideRef or not creator == lastCreator:
lastCreator = creator
lastSlideRef = slideRef
for f in WantSlideChangeNotification:
f()
#if len(creator) == 0:
# creator = '<none>'
#if len(slideRef) == 0:
# slideRef = '<none>'
#if len(notes) == 0:
# notes = '<none>'
#if len(sampleNotes) == 0:
# sampleNotes = '<none>'
mdh.setEntry('Sample.Creator', creator)
mdh.setEntry('Sample.SlideRef', slideRef)
if len(sampleNotes) > 0:
mdh.setEntry('Sample.Notes', sampleNotes)
#mdh.setEntry('AcquisitionNotes', notes)
# labels = []
# for i in range(self.gLabelling.GetNumberRows()):
# labels.append((self.gLabelling.GetCellValue(i, 0),self.gLabelling.GetCellValue(i, 1)))
mdh.setEntry('Sample.Labelling', [(l.structure, l.dye.shortName)
for l in self.slide.labelling.all()])
mdh.setEntry('AcquiringUser', nameUtils.getUsername())
#slide = models.Slide.Get(creator, slideRef)
# if not self.slideExists:
# for struct, label in self.labels:
# l = models.Labelling(slideID=slide, structure=struct, label=label)
# l.notes = sampleNotes
# l.save()
if acquiring:
notes = self.tNotes.GetValue()
mdh.setEntry('Notes', notes)
def createImage(mdh, slide, comments=''):
im = models.Image.GetOrCreate(mdh.getEntry('imageID'), nameUtils.getUsername(), slide, mdh.getEntry('StartTime'))
im.comments = comments
im.save()
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
##################
import wx
#import wx.grid
import wx.lib.mixins.listctrl as listmix
import sys
from PYME.FileUtils import nameUtils
from PYME.misc import TextCtrlAutoComplete
from PYME.SampleDB2 import populate #just to setup the Django environment
from PYME.SampleDB2.samples import models
lastCreator = nameUtils.getUsername()
lastSlideRef = ''
currentSlide = [None]
WantSlideChangeNotification = []
from PYME.Acquire.MetaDataHandler import NestedClassMDHandler
slideMD = NestedClassMDHandler()
class AutoWidthListCtrl(wx.ListCtrl, listmix.ListCtrlAutoWidthMixin):
def __init__(self, parent, ID, pos=wx.DefaultPosition,
size=wx.DefaultSize, style=0):
wx.ListCtrl.__init__(self, parent, ID, pos, size, style)
listmix.ListCtrlAutoWidthMixin.__init__(self)
def createImage(mdh, slide, comments=''):
im = models.Image.GetOrCreate(mdh.getEntry('imageID'),
nameUtils.getUsername(), slide,
mdh.getEntry('StartTime'))
im.comments = comments
im.save()
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
##################
import wx
#import wx.grid
import wx.lib.mixins.listctrl as listmix
import sys
from PYME.FileUtils import nameUtils
from PYME.misc import TextCtrlAutoComplete
from PYME.SampleDB2 import populate #just to setup the Django environment
from PYME.SampleDB2.samples import models
lastCreator = nameUtils.getUsername()
lastSlideRef = ''
currentSlide = [None]
WantSlideChangeNotification = []
from PYME.Acquire.MetaDataHandler import NestedClassMDHandler
slideMD = NestedClassMDHandler()
class AutoWidthListCtrl(wx.ListCtrl, listmix.ListCtrlAutoWidthMixin):
def __init__(self,
parent,
ID,