def write_dict(element, dictname, adict):
eNode = SubElement(element, dictname)
for key,item in adict.iteritems():
eItem = SubElement(eNode, 'Item')
if item is not None:
eItem.text = unicode(item)
else:
eItem.text = None
eItem.attrib['key'] = unicode(key)
def write_appwindow_config(self, app):
eAppWindow = app.eConfig.find('AppWindow')
if eAppWindow is None:
eAppWindow = SubElement(app.eConfig, "AppWindow")
else:
eAppWindow.clear()
x, y = self.get_position()
eAppWindow.attrib['x'] = str(x)
eAppWindow.attrib['y'] = str(y)
def write_recentfiles(self):
eRecentFiles = self.eConfig.find("RecentFiles")
if eRecentFiles is None:
eRecentFiles = SubElement(self.eConfig, "RecentFiles")
else:
eRecentFiles.clear()
for file in self.recent_files:
eFile = Element("File")
eFile.text = unicode(file)
eRecentFiles.append(eFile)
def write_recentfiles(self):
if len(self.recent_files) == 0:
return
eRecentFiles = self.eConfig.find("RecentFiles")
if eRecentFiles is None:
eRecentFiles = SubElement(self.eConfig, "RecentFiles")
else:
eRecentFiles.clear()
for file in self.recent_files:
eFile = SubElement(eRecentFiles, "File")
eFile.text = unicode(file)
def write_toolwindow_config(self, app):
eToolWindow = app.eConfig.find("ToolWindow")
if eToolWindow is None:
eToolWindow = SubElement(app.eConfig, "ToolWindow")
else:
eToolWindow.clear()
# TODO: position
eToolWindow.attrib['visible'] = str(self.get_property('visible'))
x, y = self.get_position()
eToolWindow.attrib['x'] = str(x)
eToolWindow.attrib['y'] = str(y)
width, height = self.size_request()
eToolWindow.attrib['width'] = str(width)
eToolWindow.attrib['height'] = str(height)
# get information about dockables/dockbooks
eDock = config.SubElement(eToolWindow, "Dock")
for dockbook in self.dock.dockbooks:
eDockbook = config.SubElement(eDock, "Dockbook")
for dockable in dockbook.get_children():
eDockable = config.SubElement(eDockbook, "Dockable")
width, height = dockable.size_request()
eDockable.attrib['width'] = str(width)
eDockable.attrib['height'] = str(height)
eDockable.text = dockable.__class__.__name__
def write_toolwindow_config(self, app):
eToolbox = app.eConfig.find("Toolbox")
if eToolbox is None:
eToolbox = SubElement(app.eConfig, "Toolbox")
else:
eToolbox.clear()
# get information about dockables/dockbooks
eDock = config.SubElement(eToolbox, "Dock")
for dockbook in self.dock.dockbooks:
eDockbook = config.SubElement(eDock, "Dockbook")
for dockable in dockbook.get_children():
eDockable = config.SubElement(eDockbook, "Dockable")
width, height = dockable.size_request()
eDockable.attrib["width"] = str(width)
eDockable.attrib["height"] = str(height)
eDockable.text = dockable.__class__.__name__
def write_config_templates(self, sender, eConfig):
eTemplates = eConfig.find('IOTemplates')
if eTemplates is None:
eTemplates = SubElement(eConfig, 'IOTemplates')
else:
eTemplates.clear()
for key, tpl in globals.import_templates.iteritems():
if tpl.immutable is False:
logger.debug("Writing template %s" % key)
eTemplate = SubElement(eTemplates, 'ImportTemplate')
keylist=['blurb','importer_key','extensions','skip_options']
attrs = values_as_dict(tpl, keylist, default=None)
attrs['key'] = key
iohelper.set_attributes(eTemplate, attrs)
iohelper.write_dict(eTemplate, 'Defaults', tpl.defaults)
def write_config(self, eConfig):
dock_name = self.get_data('name')
eDock = eConfig.find(dock_name)
if eDock is None:
eDock = SubElement(eConfig, dock_name)
else:
eDock.clear()
# get information about dockables/dockbooks
for dockbook in self.dockbooks:
eDockbook = SubElement(eDock, "Dockbook")
for dockable in dockbook.get_children():
eDockable = SubElement(eDockbook, "Dockable")
##width, height = dockable.size_request()
##eDockable.attrib['width'] = str(width)
##eDockable.attrib['height'] = str(height)
eDockable.text = dockable.__class__.__name__
def write_config(self, app, eConfig):
eWindow = eConfig.find('AppWindow')
if eWindow is None:
eWindow = SubElement(eConfig, "AppWindow")
else:
eWindow.clear()
width, height = self.get_size()
eWindow.attrib['width'] = str(width)
eWindow.attrib['height'] = str(height)
eWindow.attrib['sidepane'] = str(self.hpaned.get_position())
def toElement(project):
def SIV(element, key, value):
" Set If Valid -- only set element attribute if value is not None. "
if value is not None:
#print " KEY: %s => %s" % (key, str(value))
element.set(key, unicode(value))
eProject = Element("Project")
eProject.attrib['version'] = FILEFORMAT
eData = SubElement(eProject, "Datasets")
for ds in project.datasets:
if ds._array is None:
logger.error("Empty Dataset: %s. NOT SAVED." % ds.key)
continue
# Table
if isinstance(ds, Table):
tbl = ds
eTable = SubElement(eData, 'Table')
# All information about the columns is stored in the
# element tree. Only the actual data will later on be
# written to the archive.
for n in range(tbl.ncols):
eColumn = SubElement(eTable, 'Column')
SIV(eColumn, 'name', tbl.get_name(n))
dt = tbl.get_column_dtype(n)
SIV(eColumn, 'format', '%s%s' % (dt.kind, str(dt.itemsize)))
info = tbl.get_info(n)
for k,v in info._values.iteritems():
if v is not None:
eAttribute = SubElement(eColumn, 'Attribute')
SIV(eAttribute, 'key', k)
eAttribute.text = v
# general information (should be there for any other kind of
# Dataset as well)
SIV(eTable, 'key', ds.key)
SIV(eTable, 'fileformat', 'CSV' )
# write node information
node_items = tbl.node_info._checks.keys()
node_items.remove('metadata')
iohelper.write_dict(eTable, 'NodeInfo', values_as_dict(tbl.node_info, node_items))
iohelper.write_dict(eTable, 'NodeInfo', tbl.node_info.metadata)
else:
logger.error("Cannot save Dataset %s of type %s" % (ds.key, ds.__class__.__name__))
ePlots = SubElement(eProject, "Plots")
for plot in project.plots:
ePlot = SubElement(ePlots, plot.__class__.__name__)
SIV(ePlot, 'key', plot.key)
SIV(ePlot, 'title', plot.get('title'))
comment = plot.get('comment')
if comment is not None:
eComment = SubElement(ePlot, "comment")
eComment.text = comment
eLayers = SubElement(ePlot, "Layers")
for layer in plot.layers:
eLayer = SubElement(eLayers, "Layer")
attrs = values_as_dict(layer, ['type', 'grid', 'title', 'visible'], default=None)
iohelper.set_attributes(eLayer, attrs)
# # group properties
# eGroups = SubElement(eLayer, "Groups")
# def groups_to_element(eGroups, keys):
# for key in keys:
# print "Writing group property ", key
# group = layer.get_value(key)
# if group is not None:
# groupname = group.__class__.__name__
# eGroup = SubElement(eGroups, groupname)
# # TODO: cycle_list is missing, because it is a list!
# attrs = group.get_values(include=['type','value', 'range_start', 'range_stop', 'range_step'],
# default=None)
# iohelper.set_attributes(eGroup, attrs)
# groups_to_element(eGroups, ['group_linestyle',
# 'group_linemarker',
# 'group_linewidth',
# 'group_linecolor'])
# axes
for (key, axis) in layer.axes.iteritems():
eAxis = SubElement(eLayer, "Axis")
attrs = values_as_dict(axis,['label', 'scale', 'start', 'end', 'format'],default=None)
attrs['key'] = key
iohelper.set_attributes(eAxis, attrs)
# legend
legend = layer.legend
if legend is not None:
eLegend = SubElement(eLayer, "Legend")
attrs = values_as_dict(legend, ['label','position','visible','border','x','y'],default=None)
iohelper.set_attributes(eLegend, attrs)
# lines
for line in layer.lines:
eLine = SubElement(eLayer, "Line")
# For the line source we must check first
# if this is not a temporary source.
# TODO: if it was a temporary source we either
# need to ignore the source (current situation)
# or add the temporary dataset to the project.
if line.source is not None:
if project.has_dataset(key=line.source.key):
SIV(eLine, 'source', line.source.key)
else:
logger.warn("Invalid line source. Skipped source.")
attrs = values_as_dict(line, ['width','label','style','marker','visible', 'color','marker_color', 'marker_size', 'cx','cy','row_first','row_last','cxerr','cyerr'],default=None)
iohelper.set_attributes(eLine, attrs)
# layer.labels
if len(layer.labels) > 0:
eLabels = SubElement(eLayer, "Labels")
for label in layer.labels:
eLabel = SubElement(eLabels, "Label")
attrs = values_as_dict(label, ['x','y','system','valign','halign'],default=None)
iohelper.set_attributes(eLabel, attrs)
eLabel.text = label.get('text')
iohelper.beautify_element(eProject)
return eProject
def write_appwindow_config(self, app):
eAppWindow = app.eConfig.find('AppWindow')
if eAppWindow is None:
eAppWindow = SubElement(app.eConfig, "AppWindow")
else:
eAppWindow.clear()
def toElement(project):
# helper function
def safe_set(element, key, value):
if value is not None: # and isinstance(value, basestring):
element.set(key, str(value))
eProject = Element("Project")
eProject.attrib['version'] = FILEFORMAT
eDatasets = SubElement(eProject, "Datasets")
for ds in project.datasets:
if ds.get_data() is None:
raise RuntimeError("EMPTY DATASET '%s'" % ds.key)
if isinstance(ds.data, Table):
tbl = ds.data
eData = SubElement(eDatasets, 'Table')
safe_set(eData, 'ncols', tbl.ncols)
safe_set(eData, 'typecodes', tbl.typecodes_as_string)
# We write all Column properties except for the
# key and the data to the element tree, because
# netCDF does not like unicode!
n = 0
for column in tbl.get_columns():
kw = column.get_key_value_dict()
kw.pop('key')
kw.pop('data')
if len(kw) > 0:
eColumn = SubElement(eData, 'Column')
safe_set(eColumn, 'n', n)
for k,v in kw.iteritems():
eInfo = SubElement(eColumn, 'Info')
safe_set(eInfo, 'key', k)
eInfo.text = v
n += 1
elif isinstance(ds.data, ArrayType): # TODO: untested
eData = SubElement(eDatasets, 'Array')
else:
raise RuntimeError("Invalid dataset", ds)
safe_set(eData, 'key', ds.key)
if len(ds.metadata) > 0:
eMetadata = SubElement(eData, "Metadata")
for k,v in ds.metadata.iteritems():
eMetaitem = SubElement(eMetadata, 'Metaitem')
eMetaitem.set('key', k)
eMetaitem.text = str(v)
ePlots = SubElement(eProject, "Plots")
for plot in project.plots:
ePlot = SubElement(ePlots, plot.__class__.__name__)
safe_set(ePlot, 'key', plot.key)
safe_set(ePlot, 'title', plot.title)
if hasattr(plot, "comment"):
eComment = SubElement(ePlot, "comment")
eComment.text = plot.comment
eLayers = SubElement(ePlot, "Layers")
for layer in plot.layers:
eLayer = SubElement(eLayers, "Layer")
safe_set(eLayer, 'type', layer.type)
safe_set(eLayer, 'grid', layer.grid)
safe_set(eLayer, 'title', layer.title)
safe_set(eLayer, 'visible', layer.visible)
for (key, axis) in layer.axes.iteritems():
eAxis = SubElement(eLayer, "Axis")
eAxis.set('key', key)
safe_set(eAxis, 'label', axis.label)
safe_set(eAxis, 'scale', axis.scale)
safe_set(eAxis, 'start', axis.start)
safe_set(eAxis, 'end', axis.end)
safe_set(eAxis, 'format', axis.format)
legend = layer.legend
if legend is not None:
eLegend = SubElement(eLayer, "Legend")
safe_set(eLegend, 'label', legend.label)
safe_set(eLegend, 'position', legend.position)
safe_set(eLegend, 'visible', legend.visible)
safe_set(eLegend, 'border', legend.border)
safe_set(eLegend, 'x', legend.x)
safe_set(eLegend, 'y', legend.y)
for line in layer.lines:
eLine = SubElement(eLayer, "Line")
safe_set(eLine, 'label', line.label)
safe_set(eLine, 'style', line.style)
safe_set(eLine, 'type', line.marker)
safe_set(eLine, 'visible', line.visible)
# For the line source we must check first
# if this is not a temporary source.
# TODO: if it was a temporary source we either
# need to ignore the source (current situation)
# or add the temporary dataset to the project.
if line.source is not None:
if project.has_dataset(key=line.source.key):
safe_set(eLine, 'source', line.source.key)
else:
logger.warn("Invalid line source. Skipped source.")
safe_set(eLine, 'width', line.width)
safe_set(eLine, 'cx', line.cx)
safe_set(eLine, 'cy', line.cy)
safe_set(eLine, 'row_first', line.row_first)
safe_set(eLine, 'row_last', line.row_last)
#safe_set(eLine, 'value_range', line.value_range)
safe_set(eLine, 'cxerr', line.cxerr)
safe_set(eLine, 'cyerr', line.cyerr)
# beautify the XML output by inserting some newlines
def insert_newlines(element):
element.tail = '\n'
if element.text is None:
element.text = "\n"
for sub_element in element.getchildren():
insert_newlines(sub_element)
insert_newlines(eProject)
return eProject
def toElement(project):
def SIV(element, key, value):
" Set If Valid -- only set element attribute if value is not None. "
if value is not None:
#print " KEY: %s => %s" % (key, str(value))
element.set(key, str(value))
eProject = Element("Project")
eProject.attrib['version'] = FILEFORMAT
eDatasets = SubElement(eProject, "Datasets")
for ds in project.datasets:
if ds.get_data() is None:
raise RuntimeError("EMPTY DATASET '%s'" % ds.key)
if isinstance(ds.data, Table):
tbl = ds.data
eData = SubElement(eDatasets, 'Table')
SIV(eData, 'ncols', tbl.ncols)
SIV(eData, 'typecodes', tbl.typecodes_as_string)
# We write all Column properties except for the
# key and the data to the element tree, because
# netCDF does not like unicode!
n = 0
for column in tbl.get_columns():
kw = column.get_values(exclude=['key','data'])
if len(kw) > 0:
eColumn = SubElement(eData, 'Column')
SIV(eColumn, 'n', n)
for k,v in kw.iteritems():
if v is not None:
eInfo = SubElement(eColumn, 'Info')
SIV(eInfo, 'key', k)
eInfo.text = v
n += 1
elif isinstance(ds.data, ArrayType): # TODO: untested
eData = SubElement(eDatasets, 'Array')
else:
raise RuntimeError("Invalid dataset", ds)
SIV(eData, 'key', ds.rget('key'))
SIV(eData, 'fileformat', 'CSV' )
if len(ds.metadata) > 0:
eMetadata = SubElement(eData, "Metadata")
for k,v in ds.metadata.iteritems():
eMetaitem = SubElement(eMetadata, 'Metaitem')
eMetaitem.set('key', k)
eMetaitem.text = str(v)
ePlots = SubElement(eProject, "Plots")
for plot in project.plots:
ePlot = SubElement(ePlots, plot.__class__.__name__)
SIV(ePlot, 'key', plot.rget('key'))
SIV(ePlot, 'title', plot.rget('title'))
comment = plot.rget('comment')
if comment is not None:
eComment = SubElement(ePlot, "comment")
eComment.text = comment
eLayers = SubElement(ePlot, "Layers")
for layer in plot.layers:
eLayer = SubElement(eLayers, "Layer")
SIV(eLayer, 'type', layer.rget('type'))
SIV(eLayer, 'grid', layer.rget('grid'))
SIV(eLayer, 'title', layer.rget('title'))
SIV(eLayer, 'visible', layer.rget('visible'))
for (key, axis) in layer.axes.iteritems():
eAxis = SubElement(eLayer, "Axis")
eAxis.set('key', key)
SIV(eAxis, 'label', axis.rget('label'))
SIV(eAxis, 'scale', axis.rget('scale'))
SIV(eAxis, 'start', axis.rget('start'))
SIV(eAxis, 'end', axis.rget('end'))
SIV(eAxis, 'format', axis.rget('format'))
legend = layer.legend
if legend is not None:
eLegend = SubElement(eLayer, "Legend")
SIV(eLegend, 'label', legend.rget('label'))
SIV(eLegend, 'position', legend.rget('position'))
SIV(eLegend, 'visible', legend.rget('visible'))
SIV(eLegend, 'border', legend.rget('border'))
SIV(eLegend, 'x', legend.rget('x'))
SIV(eLegend, 'y', legend.rget('y'))
for line in layer.lines:
eLine = SubElement(eLayer, "Line")
SIV(eLine, 'label', line.rget('label'))
SIV(eLine, 'style', line.rget('style'))
SIV(eLine, 'marker', line.rget('marker'))
SIV(eLine, 'visible', line.rget('visible'))
# For the line source we must check first
# if this is not a temporary source.
# TODO: if it was a temporary source we either
# need to ignore the source (current situation)
# or add the temporary dataset to the project.
if line.source is not None:
if project.has_dataset(key=line.source.key):
SIV(eLine, 'source', line.source.rget('key'))
else:
logger.warn("Invalid line source. Skipped source.")
SIV(eLine, 'width', line.rget('width'))
SIV(eLine, 'cx', line.rget('cx'))
SIV(eLine, 'cy', line.rget('cy'))
SIV(eLine, 'row_first', line.rget('row_first'))
SIV(eLine, 'row_last', line.rget('row_last'))
SIV(eLine, 'cxerr', line.rget('cxerr'))
SIV(eLine, 'cyerr', line.rget('cyerr'))
# layer.labels
if len(layer.labels) > 0:
eLabels = SubElement(eLayer, "Labels")
for label in layer.labels:
eLabel = SubElement(eLabels, "Label")
SIV(eLabel, 'x', label.rget('x'))
SIV(eLabel, 'y', label.rget('y'))
SIV(eLabel, 'system', label.rget('system'))
SIV(eLabel, 'valign', label.rget('valign'))
SIV(eLabel, 'halign', label.rget('halign'))
eLabel.text = label.rget('text')
# beautify the XML output by inserting some newlines
def insert_newlines(element):
element.tail = '\n'
if element.text is None:
element.text = "\n"
for sub_element in element.getchildren():
insert_newlines(sub_element)
insert_newlines(eProject)
return eProject
def write_list(element, listname, alist):
eNode = SubElement(element, listname)
for item in alist:
eItem = SubElement(eNode, 'Item')
if item is not None:
eItem.text = unicode(item)
def toElement(project):
def safe_set(element, key, value):
if value is not None: # and isinstance(value, basestring):
element.set(key, str(value))
eProject = Element("Project")
###eProject.attrib['version'] = FILEFORMAT
eDatasets = SubElement(eProject, "Datasets")
for ds in project.datasets:
if ds.get_data() is None:
raise RuntimeError("EMPTY DATASET '%s'" % ds.key)
if isinstance(ds.data, Table):
tbl = ds.data
eData = SubElement(eDatasets, "Table")
safe_set(eData, "cols", tbl.colcount)
safe_set(eData, "typecodes", tbl.typecodes_as_string)
elif isinstance(ds.data, ArrayType): # TODO: untested
eData = SubElement(eDatasets, "Array")
else:
raise RuntimeError("Invalid dataset", ds)
safe_set(eData, "key", ds.key)
if len(ds.metadata) > 0:
eMetadata = SubElement(eData, "Metadata")
for k, v in ds.metadata.iteritems():
eMetaitem = SubElement(eMetadata, "Metaitem")
eMetaitem.set("key", k)
eMetaitem.text = str(v)
ePlots = SubElement(eProject, "Plots")
for plot in project.plots:
ePlot = SubElement(ePlots, plot.getClassName())
safe_set(ePlot, "key", plot.key)
safe_set(ePlot, "title", plot.title)
if hasattr(plot, "comment"):
eComment = SubElement(ePlot, "comment")
eComment.text = plot.comment
eLayers = SubElement(ePlot, "Layers")
for layer in plot.layers:
eLayer = SubElement(eLayers, "Layer")
safe_set(eLayer, "type", layer.type)
safe_set(eLayer, "grid", layer.grid)
safe_set(eLayer, "title", layer.title)
safe_set(eLayer, "visible", layer.visible)
for (key, axis) in layer.axes.iteritems():
eAxis = SubElement(eLayer, "Axis")
eAxis.set("key", key)
safe_set(eAxis, "label", axis.label)
safe_set(eAxis, "scale", axis.scale)
safe_set(eAxis, "start", axis.start)
safe_set(eAxis, "end", axis.end)
safe_set(eAxis, "format", axis.format)
legend = layer.legend
if legend is not None:
eLegend = SubElement(eLayer, "Legend")
safe_set(eLegend, "label", legend.label)
safe_set(eLegend, "position", legend.position)
safe_set(eLegend, "visible", legend.visible)
safe_set(eLegend, "border", legend.border)
safe_set(eLegend, "x", legend.x)
safe_set(eLegend, "y", legend.y)
for line in layer.lines:
eLine = SubElement(eLayer, "Line")
safe_set(eLine, "label", line.label)
safe_set(eLine, "style", line.style)
safe_set(eLine, "type", line.marker)
safe_set(eLine, "visible", line.visible)
# For the line source we must check first
# if this is not a temporary source.
# TODO: if it was a temporary source we either
# need to ignore the source (current situation)
# or add the temporary dataset to the project.
if line.source is not None:
if project.has_dataset(key=line.source.key):
safe_set(eLine, "source", line.source.key)
else:
logger.warn("Invalid line source. Skipped source.")
safe_set(eLine, "width", line.width)
safe_set(eLine, "cx", line.cx)
safe_set(eLine, "cy", line.cy)
safe_set(eLine, "cxerr", line.cxerr)
safe_set(eLine, "cyerr", line.cyerr)
# beautify the XML output by inserting some newlines
def insert_newlines(element):
element.tail = "\n"
if element.text is None:
element.text = "\n"
for sub_element in element.getchildren():
insert_newlines(sub_element)
# insert_newlines(eProject)
return eProject