def generateXSDataISPyBImage(_xsDataInputControlISPyB):
        """
        """
        EDFactoryPluginStatic.loadModule("XSDataISPyBv1_2")
        from XSDataISPyBv1_2 import XSDataString
        from XSDataISPyBv1_2 import XSDataISPyBImage
        xsDataResultCharacterisationv2_0 = _xsDataInputControlISPyB.getCharacterisationResult()
        xsDataResultCharacterisation = xsDataResultCharacterisationv2_0.getMxv1ResultCharacterisation()

        xsDataISPyBImage = None
        # Find path to first image from data collection information
        strPathToFirstImage = None
        xsDataCollection = xsDataResultCharacterisation.getDataCollection()
        if (xsDataCollection is not None):
            lXSDataSubWedge = xsDataCollection.getSubWedge()
            if (lXSDataSubWedge is not None):
                xsDataSubWedgeFirst = lXSDataSubWedge[0]
                lXSDataImage = xsDataSubWedgeFirst.getImage()
                if (lXSDataImage is not None):
                    xsDataImageFirst = lXSDataImage[ 0 ]
                    strPathToFirstImage = xsDataImageFirst.getPath().getValue()

            # Add an image path if the dataCollectionId is not present...
            if (strPathToFirstImage is not None):
                xsDataISPyBImage = XSDataISPyBImage()
                strImageBaseName = EDUtilsFile.getBaseName(strPathToFirstImage)
                strDirectoryName = EDUtilsPath.getFolderName(strPathToFirstImage)
                xsDataISPyBImage.setFileName(XSDataString(strImageBaseName))
                xsDataISPyBImage.setFileLocation(XSDataString(strDirectoryName))
        return xsDataISPyBImage
Exemplo n.º 2
0
    def generateXSDataISPyBImage(_xsDataInputControlISPyB):
        """
        """
        EDFactoryPluginStatic.loadModule("XSDataISPyBv1_2")
        from XSDataISPyBv1_2 import XSDataString
        from XSDataISPyBv1_2 import XSDataISPyBImage
        xsDataResultCharacterisation = _xsDataInputControlISPyB.getCharacterisationResult(
        )

        xsDataISPyBImage = None
        # Find path to first image from data collection information
        strPathToFirstImage = None
        xsDataCollection = xsDataResultCharacterisation.getDataCollection()
        if (xsDataCollection is not None):
            lXSDataSubWedge = xsDataCollection.getSubWedge()
            if (lXSDataSubWedge is not None):
                xsDataSubWedgeFirst = lXSDataSubWedge[0]
                lXSDataImage = xsDataSubWedgeFirst.getImage()
                if (lXSDataImage is not None):
                    xsDataImageFirst = lXSDataImage[0]
                    strPathToFirstImage = xsDataImageFirst.getPath().getValue()

            # Add an image path if the dataCollectionId is not present...
            if (strPathToFirstImage is not None):
                xsDataISPyBImage = XSDataISPyBImage()
                strImageBaseName = EDUtilsFile.getBaseName(strPathToFirstImage)
                strDirectoryName = EDUtilsPath.getFolderName(
                    strPathToFirstImage)
                xsDataISPyBImage.setFileName(XSDataString(strImageBaseName))
                xsDataISPyBImage.setFileLocation(
                    XSDataString(strDirectoryName))
        return xsDataISPyBImage
    def testSetDataModelInput(self):
        """
        A test for whether we can obtain the expected XML by setting a certain input for the plugin. 
        """
        edPluginISPyB = self.createPlugin()
        xsPluginItemISPyB = self.getPluginConfiguration(os.path.join(self.getPluginTestsDataHome(), "XSConfiguration.xml"))
        edPluginISPyB.setConfiguration(xsPluginItemISPyB)
        edPluginISPyB.configure()

        # Create XSDataISPyB objects

        xsDataISPyBImage = XSDataISPyBImage()
        xsDataISPyBImage.setFileName(XSDataString("test.img"))
        xsDataISPyBImage.setFileLocation(XSDataString("/tmp"))

        xsDataISPyBScreening = XSDataISPyBScreening()
        xsDataISPyBScreening.setProgramVersion(XSDataString("EDNA Prototype"))

        xsDataISPyBScreeningInput = XSDataISPyBScreeningInput()
        xsDataISPyBScreeningInput.setBeamX(XSDataDouble(10.4))
        xsDataISPyBScreeningInput.setBeamY(XSDataDouble(2.31))
        xsDataISPyBScreeningInput.setRmsErrorLimits(XSDataDouble(0.8))
        xsDataISPyBScreeningInput.setMinimumFractionIndexed(XSDataDouble(0.4))
        xsDataISPyBScreeningInput.setMaximumFractionRejected(XSDataDouble(0.45))
        xsDataISPyBScreeningInput.setMinimumSignalToNoise(XSDataDouble(0.56))

        xsDataISPyBScreeningOutput = XSDataISPyBScreeningOutput()
        xsDataISPyBScreeningOutput.setStatusDescription(XSDataString("It's just fine."))
        xsDataISPyBScreeningOutput.setMosaicity(XSDataDouble(0.25))
        xsDataISPyBScreeningOutput.setBeamShiftX(XSDataDouble (0.141))
        xsDataISPyBScreeningOutput.setBeamShiftY(XSDataDouble (0.156))

        xsDataISPyBScreeningOutputLattice = XSDataISPyBScreeningOutputLattice()
        xsDataISPyBScreeningOutputLattice.setSpaceGroup(XSDataString("P222"))

        xsDataISPyBScreeningStrategy = XSDataISPyBScreeningStrategy()
        xsDataISPyBScreeningStrategy.setPhiStart(XSDataDouble(0))
        xsDataISPyBScreeningStrategy.setPhiEnd(XSDataDouble(20))
        xsDataISPyBScreeningStrategy.setRotation(XSDataDouble(1))
        xsDataISPyBScreeningStrategy.setProgram(XSDataString("EDNA"))
        xsDataISPyBScreeningStrategy.setAnomalous(XSDataBoolean(1))

        xsDataISPyBScreeningStrategyWedge = XSDataISPyBScreeningStrategyWedge()
        xsDataISPyBScreeningStrategyWedge.setWedgeNumber(XSDataInteger(1))
        xsDataISPyBScreeningStrategyWedge.setResolution(XSDataDouble(2.1))
        xsDataISPyBScreeningStrategyWedge.setCompleteness(XSDataDouble(90))
        xsDataISPyBScreeningStrategyWedge.setMultiplicity(XSDataDouble(1.5))
        xsDataISPyBScreeningStrategyWedge.setDoseTotal(XSDataDouble(40.5))
        xsDataISPyBScreeningStrategyWedge.setNumberOfImages(XSDataInteger(130))

        xsDataISPyBScreeningStrategySubWedge = XSDataISPyBScreeningStrategySubWedge()
        xsDataISPyBScreeningStrategySubWedge.setSubWedgeNumber(XSDataInteger(1))
        xsDataISPyBScreeningStrategySubWedge.setRotationAxis(XSDataString("Omega"))
        xsDataISPyBScreeningStrategySubWedge.setAxisStart(XSDataDouble(0.0))
        xsDataISPyBScreeningStrategySubWedge.setAxisEnd(XSDataDouble(90.0))
        xsDataISPyBScreeningStrategySubWedge.setExposureTime(XSDataDouble(0.5))
        xsDataISPyBScreeningStrategySubWedge.setTransmission(XSDataDouble(100.0))
        xsDataISPyBScreeningStrategySubWedge.setNumberOfImages(XSDataInteger(130))

        xsDataISPyBScreeningStrategyWedgeContainer = XSDataISPyBScreeningStrategyWedgeContainer()
        xsDataISPyBScreeningStrategyWedgeContainer.setScreeningStrategyWedge(xsDataISPyBScreeningStrategyWedge)
        xsDataISPyBScreeningStrategyWedgeContainer.getScreeningStrategySubWedge().append(xsDataISPyBScreeningStrategySubWedge)

        xsDataISPyBScreeningStrategyContainer = XSDataISPyBScreeningStrategyContainer()
        xsDataISPyBScreeningStrategyContainer.setScreeningStrategy(xsDataISPyBScreeningStrategy)
        xsDataISPyBScreeningStrategyContainer.getScreeningStrategyWedgeContainer().append(xsDataISPyBScreeningStrategyWedgeContainer)

        xsDataISPyBScreeningOutputContainer = XSDataISPyBScreeningOutputContainer()
        xsDataISPyBScreeningOutputContainer.setScreeningOutput(xsDataISPyBScreeningOutput)
        xsDataISPyBScreeningOutputContainer.getScreeningOutputLattice().append(xsDataISPyBScreeningOutputLattice)
        xsDataISPyBScreeningOutputContainer.getScreeningStrategyContainer().append(xsDataISPyBScreeningStrategyContainer)

        xsDataISPyBScreeningRank = XSDataISPyBScreeningRank()
        xsDataISPyBScreeningRank.setRankValue(XSDataDouble(1.4))
        xsDataISPyBScreeningRank.setRankInformation(XSDataString("This is the only one"))

        xsDataISPyBScreeningRankSet = XSDataISPyBScreeningRankSet()
        xsDataISPyBScreeningRankSet.setRankEngine(XSDataString("ISPyB"))

        xsDataISPyBScreeningFile = XSDataISPyBScreeningFile()
        xsDataISPyBScreeningFile.setFileType(XSDataString("log"))
        xsDataISPyBScreeningFile.setDescription(XSDataString("Output log file"))

        # Write XSDataISPyB objects to files
        xsDataISPyBScreening.outputFile(self.__strObtainedScreening)
        xsDataISPyBScreeningInput.outputFile(self.__strObtainedScreeningInput)
        xsDataISPyBScreeningOutputContainer.outputFile(self.__strObtainedScreeningOutputContainer)
        xsDataISPyBScreeningRank.outputFile(self.__strObtainedScreeningRank)
        xsDataISPyBScreeningRankSet.outputFile(self.__strObtainedScreeningRankSet)
        xsDataISPyBScreeningFile.outputFile(self.__strObtainedScreeningFile)

        # Compare screening
        strInputScreeningExpected = self.readAndParseFile(self.__strReferenceInputScreening)
        xsDataScreeningExpected = XSDataInputISPyB.parseString(strInputScreeningExpected)
        strXMLScreeningExpected = xsDataScreeningExpected.marshal()

        strScreeningObtained = self.readAndParseFile(self.__strObtainedScreening)
        xsDataScreeningObtained = XSDataInputISPyB.parseString(strScreeningObtained)
        strXMLScreeningObtained = xsDataScreeningObtained.marshal()

        EDAssert.equal(strXMLScreeningExpected, strXMLScreeningObtained)

        #Compare screeningInput
        strInputScreeningInputExpected = self.readAndParseFile(self.__strReferenceInputScreeningInput)
        xsDataScreeningInputExpected = XSDataInputISPyB.parseString(strInputScreeningInputExpected)
        strXMLScreeningInputExpected = xsDataScreeningInputExpected.marshal()

        strScreeningInputObtained = self.readAndParseFile(self.__strObtainedScreeningInput)
        xsDataScreeningInputObtained = XSDataInputISPyB.parseString(strScreeningInputObtained)
        strXMLScreeningInputObtained = xsDataScreeningInputObtained.marshal()

        EDAssert.equal(strXMLScreeningInputExpected, strXMLScreeningInputObtained)

        #Compare screeningOutputContainer
        strInputScreeningOutputContainerExpected = self.readAndParseFile(self.__strReferenceInputScreeningOutputContainer)
        xsDataScreeningOutputContainerExpected = XSDataInputISPyB.parseString(strInputScreeningOutputContainerExpected)
        strXMLScreeningOutputContainerExpected = xsDataScreeningOutputContainerExpected.marshal()

        strScreeningOutputContainerObtained = self.readAndParseFile(self.__strObtainedScreeningOutputContainer)
        xsDataScreeningOutputContainerObtained = XSDataInputISPyB.parseString(strScreeningOutputContainerObtained)
        strXMLScreeningOutputContainerObtained = xsDataScreeningOutputContainerObtained.marshal()

        EDAssert.equal(strXMLScreeningOutputContainerExpected, strXMLScreeningOutputContainerObtained)

        #Compare screeningRank
        strInputScreeningRankExpected = self.readAndParseFile(self.__strReferenceInputScreeningRank)
        xsDataScreeningRankExpected = XSDataInputISPyB.parseString(strInputScreeningRankExpected)
        strXMLScreeningRankExpected = xsDataScreeningRankExpected.marshal()

        strScreeningRankObtained = self.readAndParseFile(self.__strObtainedScreeningRank)
        xsDataScreeningRankObtained = XSDataInputISPyB.parseString(strScreeningRankObtained)
        strXMLScreeningRankObtained = xsDataScreeningRankObtained.marshal()

        EDAssert.equal(strXMLScreeningRankExpected, strXMLScreeningRankObtained)

        #Compare screeningRankSet
        strInputScreeningRankSetExpected = self.readAndParseFile(self.__strReferenceInputScreeningRankSet)
        xsDataScreeningRankSetExpected = XSDataInputISPyB.parseString(strInputScreeningRankSetExpected)
        strXMLScreeningRankSetExpected = xsDataScreeningRankSetExpected.marshal()

        strScreeningRankSetObtained = self.readAndParseFile(self.__strObtainedScreeningRankSet)
        xsDataScreeningRankSetObtained = XSDataInputISPyB.parseString(strScreeningRankSetObtained)
        strXMLScreeningRankSetObtained = xsDataScreeningRankSetObtained.marshal()

        EDAssert.equal(strXMLScreeningRankSetExpected, strXMLScreeningRankSetObtained)

        #Compare screeningFile
        strInputScreeningFileExpected = self.readAndParseFile(self.__strReferenceInputScreeningFile)
        xsDataScreeningFileExpected = XSDataInputISPyB.parseString(strInputScreeningFileExpected)
        strXMLScreeningFileExpected = xsDataScreeningFileExpected.marshal()

        strScreeningFileObtained = self.readAndParseFile(self.__strObtainedScreeningFile)
        xsDataScreeningFileObtained = XSDataInputISPyB.parseString(strScreeningFileObtained)
        strXMLScreeningFileObtained = xsDataScreeningFileObtained.marshal()

        EDAssert.equal(strXMLScreeningFileExpected, strXMLScreeningFileObtained)

        self.cleanUp(edPluginISPyB)
Exemplo n.º 4
0
    def testSetDataModelInput(self):
        """
        A test for whether we can obtain the expected XML by setting a certain input for the plugin. 
        """
        edPluginISPyB = self.createPlugin()
        xsPluginItemISPyB = self.getPluginConfiguration(
            os.path.join(self.getPluginTestsDataHome(), "XSConfiguration.xml"))
        edPluginISPyB.setConfiguration(xsPluginItemISPyB)
        edPluginISPyB.configure()

        # Create XSDataISPyB objects

        xsDataISPyBImage = XSDataISPyBImage()
        xsDataISPyBImage.setFileName(XSDataString("test.img"))
        xsDataISPyBImage.setFileLocation(XSDataString("/tmp"))

        xsDataISPyBScreening = XSDataISPyBScreening()
        xsDataISPyBScreening.setProgramVersion(XSDataString("EDNA Prototype"))

        xsDataISPyBScreeningInput = XSDataISPyBScreeningInput()
        xsDataISPyBScreeningInput.setBeamX(XSDataDouble(10.4))
        xsDataISPyBScreeningInput.setBeamY(XSDataDouble(2.31))
        xsDataISPyBScreeningInput.setRmsErrorLimits(XSDataDouble(0.8))
        xsDataISPyBScreeningInput.setMinimumFractionIndexed(XSDataDouble(0.4))
        xsDataISPyBScreeningInput.setMaximumFractionRejected(
            XSDataDouble(0.45))
        xsDataISPyBScreeningInput.setMinimumSignalToNoise(XSDataDouble(0.56))

        xsDataISPyBScreeningOutput = XSDataISPyBScreeningOutput()
        xsDataISPyBScreeningOutput.setStatusDescription(
            XSDataString("It's just fine."))
        xsDataISPyBScreeningOutput.setMosaicity(XSDataDouble(0.25))
        xsDataISPyBScreeningOutput.setBeamShiftX(XSDataDouble(0.141))
        xsDataISPyBScreeningOutput.setBeamShiftY(XSDataDouble(0.156))

        xsDataISPyBScreeningOutputLattice = XSDataISPyBScreeningOutputLattice()
        xsDataISPyBScreeningOutputLattice.setSpaceGroup(XSDataString("P222"))

        xsDataISPyBScreeningStrategy = XSDataISPyBScreeningStrategy()
        xsDataISPyBScreeningStrategy.setPhiStart(XSDataDouble(0))
        xsDataISPyBScreeningStrategy.setPhiEnd(XSDataDouble(20))
        xsDataISPyBScreeningStrategy.setRotation(XSDataDouble(1))
        xsDataISPyBScreeningStrategy.setProgram(XSDataString("EDNA"))
        xsDataISPyBScreeningStrategy.setAnomalous(XSDataBoolean(1))

        xsDataISPyBScreeningStrategyWedge = XSDataISPyBScreeningStrategyWedge()
        xsDataISPyBScreeningStrategyWedge.setWedgeNumber(XSDataInteger(1))
        xsDataISPyBScreeningStrategyWedge.setResolution(XSDataDouble(2.1))
        xsDataISPyBScreeningStrategyWedge.setCompleteness(XSDataDouble(90))
        xsDataISPyBScreeningStrategyWedge.setMultiplicity(XSDataDouble(1.5))
        xsDataISPyBScreeningStrategyWedge.setDoseTotal(XSDataDouble(40.5))
        xsDataISPyBScreeningStrategyWedge.setNumberOfImages(XSDataInteger(130))

        xsDataISPyBScreeningStrategySubWedge = XSDataISPyBScreeningStrategySubWedge(
        )
        xsDataISPyBScreeningStrategySubWedge.setSubWedgeNumber(
            XSDataInteger(1))
        xsDataISPyBScreeningStrategySubWedge.setRotationAxis(
            XSDataString("Omega"))
        xsDataISPyBScreeningStrategySubWedge.setAxisStart(XSDataDouble(0.0))
        xsDataISPyBScreeningStrategySubWedge.setAxisEnd(XSDataDouble(90.0))
        xsDataISPyBScreeningStrategySubWedge.setExposureTime(XSDataDouble(0.5))
        xsDataISPyBScreeningStrategySubWedge.setTransmission(
            XSDataDouble(100.0))
        xsDataISPyBScreeningStrategySubWedge.setNumberOfImages(
            XSDataInteger(130))

        xsDataISPyBScreeningStrategyWedgeContainer = XSDataISPyBScreeningStrategyWedgeContainer(
        )
        xsDataISPyBScreeningStrategyWedgeContainer.setScreeningStrategyWedge(
            xsDataISPyBScreeningStrategyWedge)
        xsDataISPyBScreeningStrategyWedgeContainer.getScreeningStrategySubWedge(
        ).append(xsDataISPyBScreeningStrategySubWedge)

        xsDataISPyBScreeningStrategyContainer = XSDataISPyBScreeningStrategyContainer(
        )
        xsDataISPyBScreeningStrategyContainer.setScreeningStrategy(
            xsDataISPyBScreeningStrategy)
        xsDataISPyBScreeningStrategyContainer.getScreeningStrategyWedgeContainer(
        ).append(xsDataISPyBScreeningStrategyWedgeContainer)

        xsDataISPyBScreeningOutputContainer = XSDataISPyBScreeningOutputContainer(
        )
        xsDataISPyBScreeningOutputContainer.setScreeningOutput(
            xsDataISPyBScreeningOutput)
        xsDataISPyBScreeningOutputContainer.getScreeningOutputLattice().append(
            xsDataISPyBScreeningOutputLattice)
        xsDataISPyBScreeningOutputContainer.getScreeningStrategyContainer(
        ).append(xsDataISPyBScreeningStrategyContainer)

        xsDataISPyBScreeningRank = XSDataISPyBScreeningRank()
        xsDataISPyBScreeningRank.setRankValue(XSDataDouble(1.4))
        xsDataISPyBScreeningRank.setRankInformation(
            XSDataString("This is the only one"))

        xsDataISPyBScreeningRankSet = XSDataISPyBScreeningRankSet()
        xsDataISPyBScreeningRankSet.setRankEngine(XSDataString("ISPyB"))

        xsDataISPyBScreeningFile = XSDataISPyBScreeningFile()
        xsDataISPyBScreeningFile.setFileType(XSDataString("log"))
        xsDataISPyBScreeningFile.setDescription(
            XSDataString("Output log file"))

        # Write XSDataISPyB objects to files
        xsDataISPyBScreening.outputFile(self.__strObtainedScreening)
        xsDataISPyBScreeningInput.outputFile(self.__strObtainedScreeningInput)
        xsDataISPyBScreeningOutputContainer.outputFile(
            self.__strObtainedScreeningOutputContainer)
        xsDataISPyBScreeningRank.outputFile(self.__strObtainedScreeningRank)
        xsDataISPyBScreeningRankSet.outputFile(
            self.__strObtainedScreeningRankSet)
        xsDataISPyBScreeningFile.outputFile(self.__strObtainedScreeningFile)

        # Compare screening
        strInputScreeningExpected = self.readAndParseFile(
            self.__strReferenceInputScreening)
        xsDataScreeningExpected = XSDataInputISPyB.parseString(
            strInputScreeningExpected)
        strXMLScreeningExpected = xsDataScreeningExpected.marshal()

        strScreeningObtained = self.readAndParseFile(
            self.__strObtainedScreening)
        xsDataScreeningObtained = XSDataInputISPyB.parseString(
            strScreeningObtained)
        strXMLScreeningObtained = xsDataScreeningObtained.marshal()

        EDAssert.equal(strXMLScreeningExpected, strXMLScreeningObtained)

        #Compare screeningInput
        strInputScreeningInputExpected = self.readAndParseFile(
            self.__strReferenceInputScreeningInput)
        xsDataScreeningInputExpected = XSDataInputISPyB.parseString(
            strInputScreeningInputExpected)
        strXMLScreeningInputExpected = xsDataScreeningInputExpected.marshal()

        strScreeningInputObtained = self.readAndParseFile(
            self.__strObtainedScreeningInput)
        xsDataScreeningInputObtained = XSDataInputISPyB.parseString(
            strScreeningInputObtained)
        strXMLScreeningInputObtained = xsDataScreeningInputObtained.marshal()

        EDAssert.equal(strXMLScreeningInputExpected,
                       strXMLScreeningInputObtained)

        #Compare screeningOutputContainer
        strInputScreeningOutputContainerExpected = self.readAndParseFile(
            self.__strReferenceInputScreeningOutputContainer)
        xsDataScreeningOutputContainerExpected = XSDataInputISPyB.parseString(
            strInputScreeningOutputContainerExpected)
        strXMLScreeningOutputContainerExpected = xsDataScreeningOutputContainerExpected.marshal(
        )

        strScreeningOutputContainerObtained = self.readAndParseFile(
            self.__strObtainedScreeningOutputContainer)
        xsDataScreeningOutputContainerObtained = XSDataInputISPyB.parseString(
            strScreeningOutputContainerObtained)
        strXMLScreeningOutputContainerObtained = xsDataScreeningOutputContainerObtained.marshal(
        )

        EDAssert.equal(strXMLScreeningOutputContainerExpected,
                       strXMLScreeningOutputContainerObtained)

        #Compare screeningRank
        strInputScreeningRankExpected = self.readAndParseFile(
            self.__strReferenceInputScreeningRank)
        xsDataScreeningRankExpected = XSDataInputISPyB.parseString(
            strInputScreeningRankExpected)
        strXMLScreeningRankExpected = xsDataScreeningRankExpected.marshal()

        strScreeningRankObtained = self.readAndParseFile(
            self.__strObtainedScreeningRank)
        xsDataScreeningRankObtained = XSDataInputISPyB.parseString(
            strScreeningRankObtained)
        strXMLScreeningRankObtained = xsDataScreeningRankObtained.marshal()

        EDAssert.equal(strXMLScreeningRankExpected,
                       strXMLScreeningRankObtained)

        #Compare screeningRankSet
        strInputScreeningRankSetExpected = self.readAndParseFile(
            self.__strReferenceInputScreeningRankSet)
        xsDataScreeningRankSetExpected = XSDataInputISPyB.parseString(
            strInputScreeningRankSetExpected)
        strXMLScreeningRankSetExpected = xsDataScreeningRankSetExpected.marshal(
        )

        strScreeningRankSetObtained = self.readAndParseFile(
            self.__strObtainedScreeningRankSet)
        xsDataScreeningRankSetObtained = XSDataInputISPyB.parseString(
            strScreeningRankSetObtained)
        strXMLScreeningRankSetObtained = xsDataScreeningRankSetObtained.marshal(
        )

        EDAssert.equal(strXMLScreeningRankSetExpected,
                       strXMLScreeningRankSetObtained)

        #Compare screeningFile
        strInputScreeningFileExpected = self.readAndParseFile(
            self.__strReferenceInputScreeningFile)
        xsDataScreeningFileExpected = XSDataInputISPyB.parseString(
            strInputScreeningFileExpected)
        strXMLScreeningFileExpected = xsDataScreeningFileExpected.marshal()

        strScreeningFileObtained = self.readAndParseFile(
            self.__strObtainedScreeningFile)
        xsDataScreeningFileObtained = XSDataInputISPyB.parseString(
            strScreeningFileObtained)
        strXMLScreeningFileObtained = xsDataScreeningFileObtained.marshal()

        EDAssert.equal(strXMLScreeningFileExpected,
                       strXMLScreeningFileObtained)

        self.cleanUp(edPluginISPyB)