def setup(self):
# # Instantiate and connect widgets
connectorCollapsibleButton = ctk.ctkCollapsibleButton()
connectorCollapsibleButton.text = "Leap Motion Controller Connector"
self.layout.addWidget(connectorCollapsibleButton)
connectorLayout = qt.QFormLayout(connectorCollapsibleButton)
# Start and stop listening
self.startButton = qt.QPushButton("Start Recording")
connectorLayout.addRow(self.startButton)
self.stopButton = qt.QPushButton("Stop Recording")
connectorLayout.addRow(self.stopButton)
#Buttons, boxes
self.schemeBrowserSelector = ctk.ctkComboBox()
self.schemeBrowserSelector.addItem('%s. Pointer Browser' % 0)
self.schemeBrowserSelector.addItem('%s. Spinner Browser' % 1)
connectorLayout.addRow("Browser Type:", self.schemeBrowserSelector)
self.browserButton = qt.QPushButton("Open Browser")
connectorLayout.addRow(self.browserButton)
self.updateButton = qt.QPushButton("Update")
connectorLayout.addRow(self.updateButton)
# Debug box
self.textBox = qt.QTextEdit()
self.layout.addWidget(self.textBox)
self.layout.addStretch(1)
#Connections
self.startButton.connect('clicked(bool)', self.onStart)
self.stopButton.connect('clicked(bool)', self.onStop)
self.browserButton.connect('clicked(bool)', self.onOpenBrowser)
self.updateButton.connect('clicked(bool)', self.onUpdate)
# Instantiate timer
self.timer = qt.QTimer()
# Instantiate Leap Motion device
self.controller = LeapLib.Leap.Controller()
self.controller.enable_gesture(LeapLib.Leap.Gesture.TYPE_CIRCLE);
self.controller.enable_gesture(LeapLib.Leap.Gesture.TYPE_KEY_TAP);
self.controller.enable_gesture(LeapLib.Leap.Gesture.TYPE_SCREEN_TAP);
self.controller.enable_gesture(LeapLib.Leap.Gesture.TYPE_SWIPE);
def setup(self):
QCLib.genericPanel.setup(self)
#
# Parameters Area
#
parametersCollapsibleButton = ctk.ctkCollapsibleButton()
parametersCollapsibleButton.text = "Parameters"
self.framelayout.addWidget(parametersCollapsibleButton)
parametersFormLayout = qt.QFormLayout(parametersCollapsibleButton)
#
# ROI volume selector
#
self.ROISelector = slicer.qMRMLNodeComboBox()
# self.ROISelector.nodeTypes = ( ("vtkMRMLScalarVolumeNode"), "" )
# self.ROISelector.addAttribute( "vtkMRMLScalarVolumeNode", "LabelMap", 1 )
self.ROISelector.nodeTypes = ["vtkMRMLLabelMapVolumeNode"]
self.ROISelector.selectNodeUponCreation = False
self.ROISelector.addEnabled = False
self.ROISelector.removeEnabled = False
self.ROISelector.noneEnabled = True
self.ROISelector.showHidden = False
self.ROISelector.showChildNodeTypes = False
self.ROISelector.setMRMLScene( slicer.mrmlScene )
self.ROISelector.setToolTip( "ROI for analysis" )
parametersFormLayout.addRow("Rectangular ROI: ", self.ROISelector)
#object type selector
self.typeSel = ctk.ctkComboBox()
types=["Edge","Line (Not Implemented)","Point","Droedge (Not Implemented)"]
self.typeSel.addItems(types)
self.typeSel.editable=False
self.typeSel.setCurrentIndex(0)
parametersFormLayout.addRow("Type of Analysis", self.typeSel)
# #edge algorithm selector
# self.algorithmSel = ctk.ctkComboBox()
# algorithms=["Canny","Sobel","Zero Crossing Based"]
# self.algorithmSel.addItems(algorithms)
# #self.algorithmSel.enabled=False
# self.algorithmSel.editable=False
# self.algorithmSel.setCurrentIndex(0)
# parametersFormLayout.addRow("Edge Detection Algorithm", self.algorithmSel)
# #distance transform algorithm selector
# self.distalgorithmSel = ctk.ctkComboBox()
# distalgorithms=["Maurer Signed","Approximate Signed","Danielsson Signed","VTK Unsigned"]
# self.distalgorithmSel.addItems(distalgorithms)
# self.distalgorithmSel.editable=False
# self.distalgorithmSel.setCurrentIndex(0)
# parametersFormLayout.addRow("Distance Transform Algorithm", self.distalgorithmSel)
#save intermediate
self.intermediateCB = ctk.ctkCheckBox()
self.intermediateCB.setChecked(False)
parametersFormLayout.addRow("Save intermediate images and curves",self.intermediateCB)
#options
optionsCollapsibleButton = ctk.ctkCollapsibleButton()
optionsCollapsibleButton.text = "Options"
self.framelayout.addWidget(optionsCollapsibleButton)
optionsFormLayout = qt.QFormLayout(optionsCollapsibleButton)
self.edgeoptionframe=qt.QFrame()
self.edgeoptionframe.enabled=False
edgeoptionFormLayout = qt.QFormLayout(self.edgeoptionframe)
self.pointoptionframe=qt.QFrame()
self.pointoptionframe.enabled=False
pointoptionFormLayout = qt.QFormLayout(self.pointoptionframe)
optionsCollapsibleButton.layout().addWidget(self.edgeoptionframe)
optionsCollapsibleButton.layout().addWidget(self.pointoptionframe)
#edge options
#symmetrize LSF
self.symmetrizeCB = ctk.ctkCheckBox()
self.symmetrizeCB.setChecked(True)
self.symmetrizeCB.enabled=True
edgeoptionFormLayout.addRow("Symmetrize LSF",self.symmetrizeCB)
#point options
#detection point criteria
self.pointCB = ctk.ctkCheckBox()
self.pointCB.setChecked(True)
self.pointCB.enabled=True
pointoptionFormLayout.addRow("Point object BRIGHTER than background",self.pointCB)
# self.objradSB=ctk.ctkDoubleSpinBox()
# self.objradSB.minimum=0
# self.objradSB.maximum=10
# self.objradSB.value=0.5
# pointoptionFormLayout.addRow("Radius of object point(mm)",self.objradSB)
self.setOptions()
#
# Apply Button
#
self.applyButton = qt.QPushButton("Apply")
self.applyButton.toolTip = "Run the algorithm."
self.applyButton.enabled = False
self.framelayout.addWidget(self.applyButton)
arrayValCollapsibleButton = ctk.ctkCollapsibleButton()
arrayValCollapsibleButton.text = "Array Value"
self.framelayout.addWidget(arrayValCollapsibleButton)
# Layout within the dummy collapsible button
arrayValFormLayout = qt.QFormLayout(arrayValCollapsibleButton)
#
# Array selector
#
self.ArraySelector = slicer.qMRMLNodeComboBox()
self.ArraySelector.nodeTypes = ( ("vtkMRMLDoubleArrayNode"), "" )
self.ArraySelector.selectNodeUponCreation = False
self.ArraySelector.addEnabled = False
self.ArraySelector.removeEnabled = False
self.ArraySelector.noneEnabled = True
self.ArraySelector.showHidden = False
self.ArraySelector.showChildNodeTypes = False
self.ArraySelector.setMRMLScene( slicer.mrmlScene )
self.ArraySelector.setToolTip( "Array for analysis" )
arrayValFormLayout.addRow("Function to interpolate: ", self.ArraySelector)
self.abscissaSB=ctk.ctkDoubleSpinBox()
self.abscissaSB.minimum=0
self.abscissaSB.maximum=0
self.abscissaSB.value=0
self.abscissaSB.enabled=False
arrayValFormLayout.addRow("Abscissa Value: ",self.abscissaSB)
self.ordinateVal=qt.QLineEdit()
self.ordinateVal.readOnly=True
self.ordinateVal.text=""
arrayValFormLayout.addRow("Value: ",self.ordinateVal)
# connections
self.applyButton.connect('clicked(bool)', self.onApplyButton)
self.masterSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.ROISelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.ArraySelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelectArray)
self.abscissaSB.connect("valueChanged(double)",self.getOrdinate)
self.typeSel.connect("currentIndexChanged(int)",self.setOptions)
# Add vertical spacer
self.layout.addStretch(1)
def createUserInterface(self):
self.__layout = self.__parent.createUserInterface()
'''
# Input fiducials node selector
#self.inputFiducialsNodeSelector = slicer.qMRMLNodeComboBox()
self.inputFiducialsNodeSelector.toolTip = "Select a fiducial to define an insertion point for a screw."
self.inputFiducialsNodeSelector.nodeTypes = (("vtkMRMLMarkupsFiducialNode"), "")
self.inputFiducialsNodeSelector.addEnabled = False
self.inputFiducialsNodeSelector.removeEnabled = False
self.inputFiducialsNodeSelector.setMRMLScene( slicer.mrmlScene )
self.inputFiducialsNodeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.fidChanged)
self.__layout.addRow("Select Insertion Point:", self.inputFiducialsNodeSelector)
self.fid = self.inputFiducialsNodeSelector.currentNode()
self.sliceChange()
'''
'''
# Input model selector
self.inputScrewSelector = ctk.ctkComboBox()
self.inputScrewSelector.toolTip = "Select a screw to insert."
screwList = ['Select a screw','475x30', '475x35', '475x45', '550x30', '550x40', '550x45', '625x35', '625x40', '625x45', '625x50', '700x35', '700x40', '700x45', '700x50']
self.inputScrewSelector.addItems(screwList)
self.connect(self.inputScrewSelector, PythonQt.QtCore.SIGNAL('activated(QString)'), self.combo_chosen)
self.__layout.addRow("Choose Screw:", self.inputScrewSelector)
vText = qt.QLabel("1st Instrumented Level:")
iText = qt.QLabel("# to Instrument:")
aText = qt.QLabel("Approach Direction:")
self.vSelector = qt.QComboBox()
self.vSelector.setMaximumWidth(120)
self.levels = ("C1","C2","C3","C4","C5","C6","C7","T1","T2","T3","T4","T5","T6","T7","T8","T9","T10","T11","T12","L1", "L2", "L3", "L4", "L5","S1")
self.vSelector.addItems(self.levels)
self.iSelector = qt.QComboBox()
self.iSelector.setMaximumWidth(120)
self.iSelector.addItems(['1','2','3','4','5','6','7','8','9','10','11','12'])
self.aSelector = qt.QComboBox()
self.aSelector.setMaximumWidth(120)
self.aSelector.addItems(['Posterior','Anterior','Left','Right'])
blank = qt.QLabel(" ")
blank.setMaximumWidth(30)
#self.__layout.addWidget(vText)
#self.__layout.addWidget(self.vSelector)
#self.__layout.addWidget(iText)
#self.__layout.addWidget(self.iSelector)
self.vertebraeGridBox = qt.QGridLayout()
self.vertebraeGridBox.addWidget(vText,0,0)
self.vertebraeGridBox.addWidget(self.vSelector,1,0)
self.vertebraeGridBox.addWidget(blank,0,1)
self.vertebraeGridBox.addWidget(iText,0,2)
self.vertebraeGridBox.addWidget(blank,1,1)
self.vertebraeGridBox.addWidget(self.iSelector,1,2)
self.vertebraeGridBox.addWidget(blank,0,3)
self.vertebraeGridBox.addWidget(aText,0,4)
self.vertebraeGridBox.addWidget(blank,1,3)
self.vertebraeGridBox.addWidget(self.aSelector,1,4)
self.__layout.addRow(self.vertebraeGridBox)
'''
self.fiducial = ctk.ctkComboBox()
self.fiducial.toolTip = "Select an insertion site."
self.fiducial.addItems(self.fiduciallist)
self.connect(self.fiducial,
PythonQt.QtCore.SIGNAL('activated(QString)'),
self.fiducial_chosen)
#self.screwGridLayout.addWidget(self.fiducial,0,0)
self.__layout.addRow("Insertion Site:", self.fiducial)
self.__fiducial = ''
measuredText1 = qt.QLabel(" Measured:")
measuredText2 = qt.QLabel(" Measured:")
lengthText = qt.QLabel("Screw Length: ")
widthText = qt.QLabel("Screw Width: ")
self.length = ctk.ctkComboBox()
self.length.toolTip = "Select a screw to insert."
screwList = ['Select a length (mm)', '475', '550', '625', '700']
self.length.addItems(screwList)
self.connect(self.length, PythonQt.QtCore.SIGNAL('activated(QString)'),
self.length_chosen)
self.lengthMeasure = qt.QLineEdit()
#self.__layout.addRow("Screw Length:", self.length)
#self.__layout.addRow("Measured Pedicle Length:", self.lengthMeasure)
self.__length = ''
self.QHBox1 = qt.QHBoxLayout()
self.QHBox1.addWidget(lengthText)
self.QHBox1.addWidget(self.length)
self.QHBox1.addWidget(measuredText1)
self.QHBox1.addWidget(self.lengthMeasure)
self.__layout.addRow(self.QHBox1)
self.diameter = ctk.ctkComboBox()
self.diameter.toolTip = "Select a screw to insert."
screwList = ['Select a diameter (mm)', '30', '35', '45', '50']
self.diameter.addItems(screwList)
self.widthMeasure = qt.QLineEdit()
self.connect(self.diameter,
PythonQt.QtCore.SIGNAL('activated(QString)'),
self.diameter_chosen)
#self.__layout.addRow("Screw Diameter:", self.diameter)
#self.__layout.addRow("Measured Pedicle Width:", self.widthMeasure)
self.__diameter = ''
self.QHBox2 = qt.QHBoxLayout()
self.QHBox2.addWidget(widthText)
self.QHBox2.addWidget(self.diameter)
self.QHBox2.addWidget(measuredText2)
self.QHBox2.addWidget(self.widthMeasure)
self.__layout.addRow(self.QHBox2)
# Load Screw Button
self.__loadScrewButton = qt.QPushButton("Load Screw")
self.__loadScrewButton.enabled = False
#self.__layout.addWidget(self.__loadScrewButton)
self.__loadScrewButton.connect('clicked(bool)', self.loadScrew)
# Delete Screw Button
self.__delScrewButton = qt.QPushButton("Delete Screw")
self.__delScrewButton.enabled = True
#self.__layout.addWidget(self.__delScrewButton)
self.__delScrewButton.connect('clicked(bool)', self.delScrew)
self.QHBox3 = qt.QHBoxLayout()
self.QHBox3.addWidget(self.__loadScrewButton)
self.QHBox3.addWidget(self.__delScrewButton)
self.__layout.addRow(self.QHBox3)
# Input model node selector
self.modelNodeSelector = slicer.qMRMLNodeComboBox()
self.modelNodeSelector.toolTip = "."
self.modelNodeSelector.nodeTypes = (("vtkMRMLModelNode"), "")
self.modelNodeSelector.addEnabled = False
self.modelNodeSelector.removeEnabled = False
self.modelNodeSelector.setMRMLScene(slicer.mrmlScene)
#self.__layout.addRow("Current Screws:", self.modelNodeSelector)
self.transformGrid = qt.QGridLayout()
vText = qt.QLabel("Vertical Adjustment:")
iText = qt.QLabel("Horizontal Adjustment:")
self.transformGrid.addWidget(vText, 0, 0)
self.transformGrid.addWidget(iText, 0, 2)
self.b = ctk.ctkDoubleSpinBox()
self.b.minimum = -45
self.b.maximum = 45
self.transformGrid.addWidget(self.b, 1, 0)
# Transform Sliders
self.transformSlider1 = ctk.ctkDoubleSlider()
self.transformSlider1.minimum = -45
self.transformSlider1.maximum = 45
self.transformSlider1.connect('valueChanged(double)',
self.transformSlider1ValueChanged)
self.transformSlider1.connect('valueChanged(double)', self.b.setValue)
self.transformSlider1.setMinimumHeight(120)
#self.__layout.addRow("Rotate IS", self.transformSlider1)
self.transformGrid.addWidget(self.transformSlider1, 1, 1)
self.b.connect('valueChanged(double)', self.transformSlider1.setValue)
# Transform Sliders
self.transformSlider2 = ctk.ctkSliderWidget()
self.transformSlider2.minimum = -45
self.transformSlider2.maximum = 45
self.transformSlider2.connect('valueChanged(double)',
self.transformSlider2ValueChanged)
self.transformSlider2.setMaximumWidth(200)
#self.__layout.addRow("Rotate LR", self.transformSlider2)
self.transformGrid.addWidget(self.transformSlider2, 1, 2)
self.__layout.addRow(self.transformGrid)
'''
# Transfors Sliders
self.transformSlider3 = ctk.ctkSliderWidget()
self.transformSlider3.minimum = 0
self.transformSlider3.maximum = 100
self.transformSlider3.connect('valueChanged(double)', self.transformSlider3ValueChanged)
self.__layout.addRow("Drive Screw", self.transformSlider3)
'''
# Insert Screw Button
self.insertScrewButton = qt.QPushButton("Insert Screw")
self.insertScrewButton.enabled = True
#self.__layout.addWidget(self.__loadScrewButton)
self.insertScrewButton.connect('clicked(bool)', self.insertScrew)
# Backout Screw Button
self.backoutScrewButton = qt.QPushButton("Backout Screw")
self.backoutScrewButton.enabled = False
#self.__layout.addWidget(self.__delScrewButton)
self.backoutScrewButton.connect('clicked(bool)', self.backoutScrew)
# Reset Screw Button
self.resetScrewButton = qt.QPushButton("Reset Screw")
self.resetScrewButton.enabled = True
#self.__layout.addWidget(self.__delScrewButton)
self.resetScrewButton.connect('clicked(bool)', self.resetScrew)
self.QHBox4 = qt.QHBoxLayout()
self.QHBox4.addWidget(self.insertScrewButton)
self.QHBox4.addWidget(self.backoutScrewButton)
self.QHBox4.addWidget(self.resetScrewButton)
self.__layout.addRow(self.QHBox4)
# Hide ROI Details
#measurementsTable = ctk.ctkCollapsibleButton()
#measurementsTable.text = "Measurements Table"
#self.__layout.addWidget(measurementsTable)
#measurementsTable.collapsed = True
'''
self.view = qt.QTableView()
self.model = qt.QStandardItemModel()
self.view.setModel(self.model)
item = qt.QStandardItem()
item.setText("item")
self.model.setItem(0,0,item)
self.__layout.addWidget(self.view)
'''
#self.__layout.addRow(self.screwGridLayout)
# self.updateWidgetFromParameters(self.parameterNode())
qt.QTimer.singleShot(0, self.killButton)
self.currentFidIndex = self.fiducial.currentIndex
self.currentFidLabel = self.fiducial.currentText
self.fidNode.GetNthFiducialPosition(self.currentFidIndex, self.coords)
logging.debug("Coords: {0}".format(self.coords))
self.updateMeasurements()
self.cameraFocus(self.coords)
def createUserInterface( self ):
self.__layout = self.__parent.createUserInterface()
self.fid = Helper.Screws()
self.fids = len(self.fid)
self.fidlist = ["Choose the puncture site"]
self.dimeter = []
self.length = []
self.PSA = []
self.PTA = []
self.CZn = 0
self.CXn = 0
self.CLstep = 0
self.CData = 3.5
self.cScrew = ""
self.csNo=0
self.screwList=[]
self.manulYn=0
# logging.debug("fids: {0}".format(self.fids))
# zheli
pNode = self.parameterNode()
print(pNode)
self.vertebra = str(pNode.GetParameter('vertebra'))
# logging.debug("椎体")
logging.debug(self.vertebra)
self.inst_length = str(pNode.GetParameter('inst_length'))
self.sides = str(pNode.GetParameter('sides'))
for i in range(self.levels.index(self.vertebra), self.levels.index(self.vertebra) + int(self.inst_length)):
# if self.vertebra == "部位":
# self.fidlist.append(self.vertebra + "_" + str(i))
# else:
if self.sides == "L&R":
self.fidlist.append(self.levels[i] + "_" + "L")
self.fidlist.append(self.levels[i] + "_" + "R")
else:
self.fidlist.append(self.levels[i] + "_" + self.sides)
for i, v in enumerate(self.fidlist[1:]):
Helper.addFid(self.fid[i][1],1,"Isthmus-{}".format(i),v,"pink")
logging.debug("Fidlist: {0}".format(self.fidlist))
logging.debug(self.fidlist[0])
sText = qt.QLabel('Choose the puncture site:')
self.sSelector = ctk.ctkComboBox()
self.sSelector.toolTip = "Choose the puncture site"
# screwList = ['选择穿刺部位', "cS1","cS2","cS3","cS4","cS5"]
self.sSelector.addItems(self.fidlist)
self.connect(self.sSelector, PythonQt.QtCore.SIGNAL('activated(QString)'), self.sSelector_chosen)
self.__sSelector=''
dText = qt.QLabel('Select screw diameter:')
self.dSelector = ctk.ctkComboBox()
self.dSelector.toolTip = "Select screw diameter"
dimList = ['Select screw diametermm', "2.5","3","3.5","4","4.5","5","5.5","6","6.5","7","7.5","8"]
self.dSelector.addItems(dimList)
self.connect(self.dSelector, PythonQt.QtCore.SIGNAL('activated(QString)'), self.dSelector_chosen)
self.__dSelector=''
self.QHBox0 = qt.QHBoxLayout()
self.QHBox0.addWidget(sText)
self.QHBox0.addWidget(self.sSelector)
self.QHBox0.addWidget(self.dSelector)
self.__layout.addRow(self.QHBox0)
self.manButton = qt.QPushButton("Update")
self.okButton = qt.QPushButton("OK")
self.resetButton = qt.QPushButton("Reset")
self.QHBox9 = qt.QHBoxLayout()
self.QHBox9.addWidget(self.manButton)
self.QHBox9.addWidget(self.okButton)
self.QHBox9.addWidget(self.resetButton)
# self.QHBox9.addWidget(self.okButton)
self.__layout.addRow(self.QHBox9)
self.manButton.connect('clicked(bool)', self.manualUp)
self.okButton.connect('clicked(bool)', self.okShow)
self.resetButton.connect('clicked(bool)', self.reset)
# self.screwsTable.setHorizontalHeaderLabels(horizontalHeaders)
self.items = []
# Camera Transform Sliders
transCam = ctk.ctkCollapsibleButton()
transCam.text = "Shift Camera Position"
transCam.collapsed = True
self.__layout.addWidget(transCam)
# transCam.collapsed = True
camLayout = qt.QFormLayout(transCam)
a = PythonQt.qMRMLWidgets.qMRMLTransformSliders()
a.setMRMLTransformNode(slicer.mrmlScene.GetNodeByID('vtkMRMLLinearTransformNode4'))
camLayout.addRow(a)
qt.QTimer.singleShot(0, self.killButton)
def setup(self):
QCLib.genericPanel.setup(self)
#
# Output Volume collapsible button
#
self.output = ctk.ctkCollapsibleButton(self.frame)
self.output.setText("Output Volume")
self.output.enabled=False
self.framelayout.addWidget(self.output)
# Layout within the dummy collapsible button
parametersFormLayout = qt.QFormLayout(self.output)
#
# output volume selector
#
self.outputSelector = slicer.qMRMLNodeComboBox()
#self.outputSelector.nodeTypes = ["vtkMRMLScalarVolumeNode"]
self.outputSelector.nodeTypes = ["vtkMRMLLabelMapVolumeNode"]
#self.outputSelector.addAttribute( "vtkMRMLScalarVolumeNode", "LabelMap", 1 )
self.outputSelector.selectNodeUponCreation = True
self.outputSelector.addEnabled = True
self.outputSelector.removeEnabled = True
self.outputSelector.noneEnabled = False
self.outputSelector.renameEnabled = True
self.outputSelector.showHidden = False
self.outputSelector.showChildNodeTypes = False
self.outputSelector.setMRMLScene(slicer.mrmlScene)
self.outputSelector.setToolTip("Output Volume")
#self.outputSelector.enabled=False
parametersFormLayout.addRow("Output Volume: ", self.outputSelector)
#algorithm selector
self.algorithmSel = ctk.ctkComboBox()
algorithms=["Canny","Sobel","Zero Crossing Based"]
self.algorithmSel.addItems(algorithms)
#self.algorithmSel.enabled=False
self.algorithmSel.editable=False
self.algorithmSel.setCurrentIndex(0)
parametersFormLayout.addRow("Edge Detection Algorithm", self.algorithmSel)
self.optionFrame=qt.QFrame()
self.optionFrame.setLayout(qt.QFormLayout())
self.optionFrame.enabled=False
self.framelayout.addWidget(self.optionFrame)
#variance slider
self.varianceSlider = ctk.ctkSliderWidget()
self.varianceSlider.minimum = 0
self.varianceSlider.maximum = 100
self.varianceSlider.setValue(2)
#self.varianceSlider.enabled = False
self.varianceSlider.setToolTip("Variance of the pre gaussian filter")
self.optionFrame.layout().addRow("Variance", self.varianceSlider)
#threshold slider
self.threshSlider=ctk.ctkRangeWidget()
self.threshSlider.minimum = 0
self.threshSlider.maximum = 0
self.threshSlider.setValues(0,0)
#self.threshSlider.enabled=False
self.threshSlider.setToolTip("Threshold of output volume")
self.optionFrame.layout().addRow("Threshold", self.threshSlider)
#
# Apply Button
#
self.applyButton = qt.QPushButton("Apply")
self.applyButton.toolTip = "Run the edge detection algotrithm"
self.applyButton.enabled = False
self.framelayout.addWidget(self.applyButton)
# connections
self.applyButton.connect('clicked(bool)', self.onApplyButton)
self.masterSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelectInput)
self.masterSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.outputSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelectOutput)
self.outputSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.algorithmSel.connect("currentIndexChanged(int)", self.setOptionEnabled)
# Add vertical spacer
self.layout.addStretch(1)
count = slicer.mrmlScene.GetNumberOfNodesByClass('vtkMRMLSliceCompositeNode')
for n in xrange(count):
compNode = slicer.mrmlScene.GetNthNodeByClass(n, 'vtkMRMLSliceCompositeNode')
compNode.SetForegroundOpacity(1.0)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# -------------------------------------------------------------------------------------
self.modelList = list()
self.fieldList = list()
self.ROIList = list()
self.ROIDict = dict() # Key = Name of ROI
# Value = Dictionary of Fields (key = Name of Field
# Value = dictionary of shapes
# key = name of shapes
# value = Statistics store()
self.logic = MeshStatisticsLogic()
# ------------------------------------------------------------------------------------
# SHAPES INPUT
# ------------------------------------------------------------------------------------
self.inputComboBox = slicer.qMRMLCheckableNodeComboBox()
self.inputComboBox.nodeTypes = ['vtkMRMLModelNode']
self.inputComboBox.setMRMLScene(slicer.mrmlScene)
inputLayout = qt.QFormLayout()
inputLayout.addRow(' Models: ', self.inputComboBox)
self.layout.addLayout(inputLayout)
self.inputComboBox.connect('checkedNodesChanged()', self.onInputComboBoxCheckedNodesChanged)
# ------------------------------------------------------------------------------------
# ROI TABLE
# ------------------------------------------------------------------------------------
self.ROIComboBox = ctk.ctkComboBox()
self.ROIComboBox.adjustSize()
self.ROICheckBox = qt.QCheckBox('All')
ROILayout = qt.QHBoxLayout()
ROILayout_0 = qt.QFormLayout()
ROILayout_0.addRow(' Region considered: ', self.ROIComboBox)
ROILayout.addLayout(ROILayout_0)
ROILayout.addWidget(self.ROICheckBox)
self.layout.addLayout(ROILayout)
self.ROICheckBox.connect('stateChanged(int)', self.onROICheckBoxStateChanged)
# ------------------------------------------------------------------------------------
# FIELD TABLE
# ------------------------------------------------------------------------------------
self.tableField = qt.QTableWidget()
self.tableField.setColumnCount(2)
self.tableField.setMinimumHeight(250)
self.tableField.setHorizontalHeaderLabels([' ', ' Field Name '])
self.tableField.setColumnWidth(0, 20)
self.tableField.setColumnWidth(1, 260)
self.tableField.setSizePolicy(qt.QSizePolicy().Expanding, qt.QSizePolicy().Expanding)
label = qt.QLabel(' Select a Field to compute statistics on:')
self.fieldLayout = qt.QVBoxLayout()
self.fieldLayout.addWidget(label)
self.fieldLayout.addWidget(self.tableField)
self.layout.addLayout(self.fieldLayout)
# ------------------------------------------------------------------------------------
# RUN
# ------------------------------------------------------------------------------------
self.runButton = qt.QPushButton(' Run ')
self.runButton.enabled = False
roiLayout = qt.QHBoxLayout()
roiLayout.addWidget(self.runButton)
self.layout.addLayout(roiLayout)
self.runButton.connect('clicked()', self.onRunButton)
# ------------------------------------------------------------------------------------
# Statistics Table - Export
# ------------------------------------------------------------------------------------
self.tabROI = qt.QTabWidget()
self.tabROI.setTabPosition(0)
self.tabROI.adjustSize()
# ---------------------------- Directory - Export Button -----------------------------
self.directoryExport = ctk.ctkDirectoryButton()
self.exportCheckBox = qt.QCheckBox('Separate Files')
self.exportCheckBox.setChecked(True)
self.exportButton = qt.QPushButton(' Export ')
self.exportButton.enabled = True
self.exportPointValueCheckBox = qt.QCheckBox('Export Value on Each Point')
self.exportLayout = qt.QVBoxLayout()
self.directoryAndExportLayout = qt.QHBoxLayout()
self.directoryAndExportLayout.addWidget(self.directoryExport)
self.directoryAndExportLayout.addWidget(self.exportCheckBox)
self.directoryAndExportLayout.addWidget(self.exportPointValueCheckBox)
self.exportButtonsLayout = qt.QHBoxLayout()
self.exportButtonsLayout.addWidget(self.exportButton)
self.exportLayout.addLayout(self.directoryAndExportLayout)
self.exportLayout.addLayout(self.exportButtonsLayout)
self.layout.addStretch(1)
self.logic.updateInterface(self.tableField, self.ROIComboBox, self.ROIList, self.modelList, self.layout)
# ------------------------------------------------------------------------------------
# OBSERVERS
# ------------------------------------------------------------------------------------
def onCloseScene(obj, event):
# initialize Parameters
globals()['MeshStatistics'] = slicer.util.reloadScriptedModule('MeshStatistics')
slicer.mrmlScene.AddObserver(slicer.mrmlScene.EndCloseEvent, onCloseScene)
def createUserInterface( self ):
self.__layout = self.__parent.createUserInterface()
'''
# Input fiducials node selector
#self.inputFiducialsNodeSelector = slicer.qMRMLNodeComboBox()
self.inputFiducialsNodeSelector.toolTip = "Select a fiducial to define an insertion point for a screw."
self.inputFiducialsNodeSelector.nodeTypes = (("vtkMRMLMarkupsFiducialNode"), "")
self.inputFiducialsNodeSelector.addEnabled = False
self.inputFiducialsNodeSelector.removeEnabled = False
self.inputFiducialsNodeSelector.setMRMLScene( slicer.mrmlScene )
self.inputFiducialsNodeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.fidChanged)
self.__layout.addRow("Select Insertion Point:", self.inputFiducialsNodeSelector)
self.fid = self.inputFiducialsNodeSelector.currentNode()
self.sliceChange()
'''
'''
# Input model selector
self.inputScrewSelector = ctk.ctkComboBox()
self.inputScrewSelector.toolTip = "Select a screw to insert."
screwList = ['Select a screw','475x30', '475x35', '475x45', '550x30', '550x40', '550x45', '625x35', '625x40', '625x45', '625x50', '700x35', '700x40', '700x45', '700x50']
self.inputScrewSelector.addItems(screwList)
self.connect(self.inputScrewSelector, PythonQt.QtCore.SIGNAL('activated(QString)'), self.combo_chosen)
self.__layout.addRow("Choose Screw:", self.inputScrewSelector)
vText = qt.QLabel("1st Instrumented Level:")
iText = qt.QLabel("# to Instrument:")
aText = qt.QLabel("Approach Direction:")
self.vSelector = qt.QComboBox()
self.vSelector.setMaximumWidth(120)
self.levels = ("C1","C2","C3","C4","C5","C6","C7","T1","T2","T3","T4","T5","T6","T7","T8","T9","T10","T11","T12","L1", "L2", "L3", "L4", "L5","S1")
self.vSelector.addItems(self.levels)
self.iSelector = qt.QComboBox()
self.iSelector.setMaximumWidth(120)
self.iSelector.addItems(['1','2','3','4','5','6','7','8','9','10','11','12'])
self.aSelector = qt.QComboBox()
self.aSelector.setMaximumWidth(120)
self.aSelector.addItems(['Posterior','Anterior','Left','Right'])
blank = qt.QLabel(" ")
blank.setMaximumWidth(30)
#self.__layout.addWidget(vText)
#self.__layout.addWidget(self.vSelector)
#self.__layout.addWidget(iText)
#self.__layout.addWidget(self.iSelector)
self.vertebraeGridBox = qt.QGridLayout()
self.vertebraeGridBox.addWidget(vText,0,0)
self.vertebraeGridBox.addWidget(self.vSelector,1,0)
self.vertebraeGridBox.addWidget(blank,0,1)
self.vertebraeGridBox.addWidget(iText,0,2)
self.vertebraeGridBox.addWidget(blank,1,1)
self.vertebraeGridBox.addWidget(self.iSelector,1,2)
self.vertebraeGridBox.addWidget(blank,0,3)
self.vertebraeGridBox.addWidget(aText,0,4)
self.vertebraeGridBox.addWidget(blank,1,3)
self.vertebraeGridBox.addWidget(self.aSelector,1,4)
self.__layout.addRow(self.vertebraeGridBox)
'''
self.fiducial = ctk.ctkComboBox()
self.fiducial.toolTip = "Select an insertion site."
#fiducialList = ['Select an insertion landmark', self.fiduciallist]
#print self.fiduciallist
#print fiducialList
#self.fiducial.addItem("Select an insertion site, no really")
#self.fiducial.addItem("Select an insertion site.")
self.fiducial.addItems(self.fiduciallist)
self.connect(self.fiducial, PythonQt.QtCore.SIGNAL('activated(QString)'), self.fiducial_chosen)
#self.connect(self.fiducial, PythonQt.QtCore.SIGNAL('activated(QString)'), self.fidChanged)
#self.screwGridLayout.addWidget(self.fiducial,0,0)
self.__layout.addRow("Insertion Site:", self.fiducial)
self.__fiducial = ''
measuredText1 = qt.QLabel(" Measured:")
measuredText2 = qt.QLabel(" Measured:")
lengthText = qt.QLabel("Screw Length: ")
widthText = qt.QLabel("Screw Width: ")
self.length = ctk.ctkComboBox()
self.length.toolTip = "Select a screw to insert."
screwList = ['Select a length (mm)','475', '550','625','700']
self.length.addItems(screwList)
self.connect(self.length, PythonQt.QtCore.SIGNAL('activated(QString)'), self.length_chosen)
self.lengthMeasure = qt.QLineEdit()
#self.__layout.addRow("Screw Length:", self.length)
#self.__layout.addRow("Measured Pedicle Length:", self.lengthMeasure)
self.__length = ''
self.QHBox1 = qt.QHBoxLayout()
self.QHBox1.addWidget(lengthText)
self.QHBox1.addWidget(self.length)
self.QHBox1.addWidget(measuredText1)
self.QHBox1.addWidget(self.lengthMeasure)
self.__layout.addRow(self.QHBox1)
self.diameter = ctk.ctkComboBox()
self.diameter.toolTip = "Select a screw to insert."
screwList = ['Select a diameter (mm)','30', '35', '45', '50']
self.diameter.addItems(screwList)
self.widthMeasure = qt.QLineEdit()
self.connect(self.diameter, PythonQt.QtCore.SIGNAL('activated(QString)'), self.diameter_chosen)
#self.__layout.addRow("Screw Diameter:", self.diameter)
#self.__layout.addRow("Measured Pedicle Width:", self.widthMeasure)
self.__diameter = ''
self.QHBox2 = qt.QHBoxLayout()
self.QHBox2.addWidget(widthText)
self.QHBox2.addWidget(self.diameter)
self.QHBox2.addWidget(measuredText2)
self.QHBox2.addWidget(self.widthMeasure)
self.__layout.addRow(self.QHBox2)
# Load Screw Button
self.__loadScrewButton = qt.QPushButton("Load Screw")
self.__loadScrewButton.enabled = False
#self.__layout.addWidget(self.__loadScrewButton)
self.__loadScrewButton.connect('clicked(bool)', self.loadScrew)
# Delete Screw Button
self.__delScrewButton = qt.QPushButton("Delete Screw")
self.__delScrewButton.enabled = True
#self.__layout.addWidget(self.__delScrewButton)
self.__delScrewButton.connect('clicked(bool)', self.delScrew)
self.QHBox3 = qt.QHBoxLayout()
self.QHBox3.addWidget(self.__loadScrewButton)
self.QHBox3.addWidget(self.__delScrewButton)
self.__layout.addRow(self.QHBox3)
# Input model node selector
self.modelNodeSelector = slicer.qMRMLNodeComboBox()
self.modelNodeSelector.toolTip = "."
self.modelNodeSelector.nodeTypes = (("vtkMRMLModelNode"), "")
self.modelNodeSelector.addEnabled = False
self.modelNodeSelector.removeEnabled = False
self.modelNodeSelector.setMRMLScene( slicer.mrmlScene )
#self.__layout.addRow("Current Screws:", self.modelNodeSelector)
self.transformGrid = qt.QGridLayout()
vText = qt.QLabel("Vertical Adjustment:")
iText = qt.QLabel("Horizontal Adjustment:")
self.transformGrid.addWidget(vText, 0,0)
self.transformGrid.addWidget(iText, 0,2)
self.b = ctk.ctkDoubleSpinBox()
self.b.minimum = -45
self.b.maximum = 45
self.transformGrid.addWidget(self.b, 1,0)
# Transform Sliders
self.transformSlider1 = ctk.ctkDoubleSlider()
self.transformSlider1.minimum = -45
self.transformSlider1.maximum = 45
self.transformSlider1.connect('valueChanged(double)', self.transformSlider1ValueChanged)
self.transformSlider1.connect('valueChanged(double)', self.b.setValue)
self.transformSlider1.setMinimumHeight(120)
#self.__layout.addRow("Rotate IS", self.transformSlider1)
self.transformGrid.addWidget(self.transformSlider1, 1,1)
self.b.connect('valueChanged(double)', self.transformSlider1.setValue)
# Transform Sliders
self.transformSlider2 = ctk.ctkSliderWidget()
self.transformSlider2.minimum = -45
self.transformSlider2.maximum = 45
self.transformSlider2.connect('valueChanged(double)', self.transformSlider2ValueChanged)
self.transformSlider2.setMaximumWidth(200)
#self.__layout.addRow("Rotate LR", self.transformSlider2)
self.transformGrid.addWidget(self.transformSlider2, 1,2)
self.__layout.addRow(self.transformGrid)
'''
# Transfors Sliders
self.transformSlider3 = ctk.ctkSliderWidget()
self.transformSlider3.minimum = 0
self.transformSlider3.maximum = 100
self.transformSlider3.connect('valueChanged(double)', self.transformSlider3ValueChanged)
self.__layout.addRow("Drive Screw", self.transformSlider3)
'''
# Insert Screw Button
self.insertScrewButton = qt.QPushButton("Insert Screw")
self.insertScrewButton.enabled = True
#self.__layout.addWidget(self.__loadScrewButton)
self.insertScrewButton.connect('clicked(bool)', self.insertScrew)
# Backout Screw Button
self.backoutScrewButton = qt.QPushButton("Backout Screw")
self.backoutScrewButton.enabled = False
#self.__layout.addWidget(self.__delScrewButton)
self.backoutScrewButton.connect('clicked(bool)', self.backoutScrew)
# Reset Screw Button
self.resetScrewButton = qt.QPushButton("Reset Screw")
self.resetScrewButton.enabled = True
#self.__layout.addWidget(self.__delScrewButton)
self.resetScrewButton.connect('clicked(bool)', self.resetScrew)
self.QHBox4 = qt.QHBoxLayout()
self.QHBox4.addWidget(self.insertScrewButton)
self.QHBox4.addWidget(self.backoutScrewButton)
self.QHBox4.addWidget(self.resetScrewButton)
self.__layout.addRow(self.QHBox4)
# Hide ROI Details
#measurementsTable = ctk.ctkCollapsibleButton()
#measurementsTable.text = "Measurements Table"
#self.__layout.addWidget(measurementsTable)
#measurementsTable.collapsed = True
'''
self.view = qt.QTableView()
self.model = qt.QStandardItemModel()
self.view.setModel(self.model)
item = qt.QStandardItem()
item.setText("item")
self.model.setItem(0,0,item)
self.__layout.addWidget(self.view)
'''
#self.__layout.addRow(self.screwGridLayout)
# self.updateWidgetFromParameters(self.parameterNode())
qt.QTimer.singleShot(0, self.killButton)
self.currentFidIndex = self.fiducial.currentIndex
self.currentFidLabel = self.fiducial.currentText
self.fidNode.GetNthFiducialPosition(self.currentFidIndex,self.coords)
print self.coords
self.updateMeasurements()
self.cameraFocus(self.coords)
def setup(self):
QCLib.genericPanel.setup(self)
#
# Parameters Area
#
parametersCollapsibleButton = ctk.ctkCollapsibleButton()
parametersCollapsibleButton.text = "Parameters"
self.framelayout.addWidget(parametersCollapsibleButton)
# Layout within the dummy collapsible button
parametersFormLayout = qt.QFormLayout(parametersCollapsibleButton)
#
# ROI volume selector
#
self.ROISelector = slicer.qMRMLNodeComboBox()
# self.ROISelector.nodeTypes = ( ("vtkMRMLScalarVolumeNode"), "" )
# self.ROISelector.addAttribute( "vtkMRMLScalarVolumeNode", "LabelMap", 1 )
self.ROISelector.nodeTypes = ["vtkMRMLLabelMapVolumeNode"]
self.ROISelector.selectNodeUponCreation = False
self.ROISelector.addEnabled = False
self.ROISelector.removeEnabled = False
self.ROISelector.noneEnabled = True
self.ROISelector.showHidden = False
self.ROISelector.showChildNodeTypes = False
self.ROISelector.setMRMLScene( slicer.mrmlScene )
self.ROISelector.setToolTip( "ROI for analysis" )
parametersFormLayout.addRow("Rectangular ROI: ", self.ROISelector)
#object type selector
self.typeSel = ctk.ctkComboBox()
types=["Wedge","Ramp"]
self.typeSel.addItems(types)
self.typeSel.editable=False
self.typeSel.setCurrentIndex(0)
parametersFormLayout.addRow("Type of Analysis", self.typeSel)
self.angleSB=ctk.ctkDoubleSpinBox()
self.angleSB.minimum=0
self.angleSB.maximum=360
self.angleSB.value=11.3
self.angleSB.enabled=True
parametersFormLayout.addRow("Angle Value: ",self.angleSB)
#direction selector
self.directionSel = ctk.ctkComboBox()
directions=["x vs y","y vs x","z vs x"]#todo: add all directions
self.directionSel.addItems(directions)
self.directionSel.editable=False
self.directionSel.setCurrentIndex(0)
parametersFormLayout.addRow("Direction: ", self.directionSel)
#
# Apply Button
#
self.applyButton = qt.QPushButton("Apply")
self.applyButton.toolTip = "Calculate FWHM."
self.applyButton.enabled = False
parametersFormLayout.addRow(self.applyButton)
resultCollapsibleButton = ctk.ctkCollapsibleButton()
resultCollapsibleButton.text = "Results"
self.framelayout.addWidget(resultCollapsibleButton)
# Layout within the dummy collapsible button
resultFormLayout = qt.QFormLayout(resultCollapsibleButton)
#
# Array selector
#
self.ArraySelector = slicer.qMRMLNodeComboBox()
self.ArraySelector.nodeTypes = ( ("vtkMRMLDoubleArrayNode"), "" )
self.ArraySelector.selectNodeUponCreation = False
self.ArraySelector.addEnabled = False
self.ArraySelector.removeEnabled = False
self.ArraySelector.noneEnabled = True
self.ArraySelector.showHidden = False
self.ArraySelector.showChildNodeTypes = False
self.ArraySelector.setMRMLScene( slicer.mrmlScene )
self.ArraySelector.setToolTip( "Ramp profile" )
resultFormLayout.addRow("Ramp profile: ", self.ArraySelector)
self.FWHMVal=qt.QLineEdit()
self.FWHMVal.readOnly=True
self.FWHMVal.text=""
resultFormLayout.addRow("FWHM: ",self.FWHMVal)
self.SliceThkVal=qt.QLineEdit()
self.SliceThkVal.readOnly=True
self.SliceThkVal.text=""
resultFormLayout.addRow("SliceThk: ",self.SliceThkVal)
# connections
self.applyButton.connect('clicked(bool)', self.onApplyButton)
self.masterSelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.ROISelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelect)
self.ArraySelector.connect("currentNodeChanged(vtkMRMLNode*)", self.onSelectArray)
# Add vertical spacer
self.layout.addStretch(1)
def createUserInterface( self ):
self.__layout = qt.QFormLayout( self )
self.__layout.setVerticalSpacing( 5 )
# Add empty rows
self.__layout.addRow( "", qt.QWidget() )
self.__layout.addRow( "", qt.QWidget() )
viewText = qt.QLabel("Viewpoint:")
self.views = ctk.ctkComboBox()
self.views.toolTip = "Select your view point."
self.views.addItem("Left")
self.views.addItem("Right")
self.connect(self.views, PythonQt.QtCore.SIGNAL('activated(QString)'), self.cameraSide)
workText = qt.QLabel("Screw Insertion Workflow")
self.QHBox = qt.QHBoxLayout()
self.QHBox.addWidget(workText)
self.__layout.addRow(self.QHBox)
self.startMeasurements = qt.QPushButton("Click to Add")
self.startMeasurements.connect('clicked(bool)', self.addFiducials)
self.markerPosition = qt.QPushButton("Click to Add")
self.markerPosition.connect('clicked(bool)', self.addPositions)
self.adjustClamp = qt.QPushButton("Click to Adjust")
self.adjustClamp.connect('clicked(bool)', self.moveAruco)
self.adjustClamp.enabled = False
self.findSP = qt.QPushButton("Click to find startpoint")
self.findSP.connect('clicked(bool)', self.findStartPoints)
self.findSP.enabled = False
self.stopTracking = qt.QPushButton("Click to stop tracking")
self.stopTracking.connect('clicked(bool)', self.stopSPTracking)
self.stopTracking.enabled = False
self.aPoints= qt.QPushButton("Click to choose points")
self.aPoints.connect('clicked(bool)', self.selectAPoints)
self.aPoints.enabled = False
self.fiducial = ctk.ctkComboBox()
self.fiducial.toolTip = "Select an insertion site."
self.fiducial.addItems(self.fiduciallist)
self.connect(self.fiducial, PythonQt.QtCore.SIGNAL('activated(QString)'), self.fidChanged)
eText = qt.QLabel("1. Add Entry Point:")
self.QHBox1 = qt.QHBoxLayout()
self.QHBox1.addWidget(eText)
self.QHBox1.addWidget(self.startMeasurements)
self.__layout.addRow(self.QHBox1)
sText = qt.QLabel("2. Active Entry Point:")
self.QHBox2 = qt.QHBoxLayout()
self.QHBox2.addWidget(sText)
self.QHBox2.addWidget(self.fiducial)
self.__layout.addRow(self.QHBox2)
qText = qt.QLabel("3. Add Clamp Position Point")
self.arucoBox = qt.QHBoxLayout()
self.arucoBox.addWidget(qText)
self.arucoBox.addWidget(self.markerPosition)
self.__layout.addRow(self.arucoBox)
mText = qt.QLabel("4. Adjust Clamp Position")
self.clampBox = qt.QHBoxLayout()
self.clampBox.addWidget(mText)
self.clampBox.addWidget(self.adjustClamp)
self.__layout.addRow(self.clampBox)
aText = qt.QLabel("5. Add anatomical points:")
self.anatomBox = qt.QHBoxLayout()
self.anatomBox.addWidget(aText)
self.anatomBox.addWidget(self.aPoints)
self.__layout.addRow(self.anatomBox)
tText = qt.QLabel("6. Start Tracking")
self.trackingBox = qt.QHBoxLayout()
self.trackingBox.addWidget(tText)
self.trackingBox.addWidget(self.findSP)
self.__layout.addRow(self.trackingBox)
stText = qt.QLabel("7. Stop Tracking")
self.trackingBoxStop = qt.QHBoxLayout()
self.trackingBoxStop.addWidget(stText)
self.trackingBoxStop.addWidget(self.stopTracking)
self.__layout.addRow(self.trackingBoxStop)
self.transformGrid = qt.QGridLayout()
self.__layout.addRow(self.transformGrid)
self.delSP = qt.QPushButton("Remove Start Point")
self.delSP.enabled = False
self.delSP.connect('clicked(bool)', self.delStartPoint)
self.QHBox4 = qt.QHBoxLayout()
self.QHBox4.addWidget(self.delSP)
self.__layout.addRow(self.QHBox4)
navCollapsibleButton = ctk.ctkCollapsibleButton()
navCollapsibleButton.text = "Navigation"
self.__layout.addWidget(navCollapsibleButton)
navCollapsibleButton.collapsed = True
# Layout
navLayout = qt.QFormLayout(navCollapsibleButton)
self.resetSliceButton = qt.QPushButton("Reset Slice Views")
navLayout.addRow(self.resetSliceButton)
self.resetSliceButton.connect('clicked(bool)', self.resetSliceViews)
qt.QTimer.singleShot(0, self.killButton)