def __init__(self,
resolution=None,
cache=True,
manifest_file=None,
ccf_version=None,
base_uri=None,
version=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('mouse_connectivity')
if version is None:
version = self.MANIFEST_VERSION
if resolution is None:
resolution = MouseConnectivityApi.VOXEL_RESOLUTION_25_MICRONS
if ccf_version is None:
ccf_version = MouseConnectivityApi.CCF_VERSION_DEFAULT
super(MouseConnectivityCache,
self).__init__(resolution,
reference_space_key=ccf_version,
cache=cache,
manifest=manifest_file,
version=version)
self.api = MouseConnectivityApi(base_uri=base_uri)
def __init__(self,
resolution=None,
cache=True,
manifest_file=None,
ccf_version=None,
base_uri=None,
version=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('mouse_connectivity')
if version is None:
version = self.MANIFEST_VERSION
if resolution is None:
resolution = MouseConnectivityApi.VOXEL_RESOLUTION_25_MICRONS
if ccf_version is None:
ccf_version = MouseConnectivityApi.CCF_VERSION_DEFAULT
super(MouseConnectivityCache, self).__init__(
resolution, reference_space_key=ccf_version, cache=cache,
manifest=manifest_file, version=version)
self.api = MouseConnectivityApi(base_uri=base_uri)
def __init__(self, cache=True, manifest_file=None, base_uri=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('cell_types')
super(CellTypesCache, self).__init__(
manifest=manifest_file, cache=cache, version=self.MANIFEST_VERSION)
self.api = CellTypesApi(base_uri=base_uri)
def __init__(self, cache=True, manifest_file=None, base_uri=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('cell_types')
super(CellTypesCache, self).__init__(manifest=manifest_file,
cache=cache,
version=self.MANIFEST_VERSION)
self.api = CellTypesApi(base_uri=base_uri)
def __init__(self, cache=True, manifest_file=None, base_uri=None, api=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('brain_observatory')
super(BrainObservatoryCache, self).__init__(
manifest=manifest_file, cache=cache, version=self.MANIFEST_VERSION)
if api is None:
self.api = BrainObservatoryApi(base_uri=base_uri)
else:
self.api = api
def __init__(self,
cache=True,
manifest_file=None,
base_uri=None,
api=None):
if manifest_file is None:
manifest_file = get_default_manifest_file('brain_observatory')
super(BrainObservatoryCache,
self).__init__(manifest=manifest_file,
cache=cache,
version=self.MANIFEST_VERSION)
if api is None:
self.api = BrainObservatoryApi(base_uri=base_uri)
else:
self.api = api
def test_get_default_manifest_file():
assert get_default_manifest_file('brain_observatory') == 'brain_observatory/manifest.json'
assert get_default_manifest_file('cell_types') == 'cell_types/manifest.json'
assert get_default_manifest_file('mouse_connectivity') == 'mouse_connectivity/manifest.json'