def download_from(self, job, zipfile_path):
"""Download cytometry results zip file from job"""
api = AquariumAPI(self.url, self.login, self.key)
file_id = job['rows'][0]['backtrace'][-1]['rval']['io_hash']['results'][0]['id']
file_url = api.find('url_for_upload', {'id': file_id})['rows'][0]
file_url = api.url.strip('/api') + file_url
urllib.urlretrieve(file_url, zipfile_path)
def sample_ids(self, sample_names):
api = AquariumAPI(self.url, self.login, self.key)
sample_ids = []
for sample_name in sample_names:
sample = api.find('sample', { 'sample': {'name': sample_name} } )
sample_ids.append(sample['rows'][0]['id'])
return sample_ids
def get_job_log(self, job_id):
api = AquariumAPI(self.url, self.login, self.key)
job = api.find('job', { "id": job_id })
return job
