def test_type(self):
parser, tool = self.get_simple_tool('test-optional.py')
for action in self._strip_help_version_actions(parser._actions):
arg_type = tool.inputs[action.dest].type
if type(
arg_type
) is list: # if argument is optional, the first type in list is `null`
arg_type = arg_type[1] # the second is the actual type
if action.choices:
if type(action.choices) is range:
self.assertEqual(list(action.choices), arg_type['symbols'])
else:
self.assertEqual(action.choices, arg_type['symbols'])
self.assertEqual('enum', arg_type['type'])
if action.type:
if isinstance(action.type, argparse.FileType):
action_type = 'File'
else:
action_type = ac.get_cwl_type(action.type)
if (action.nargs and action.nargs != '?') \
or type(action).__name__.startswith("_Append"):
self.assertEqual('array', arg_type['type'])
self.assertEqual(action.items_type or 'string',
arg_type['items'])
elif action.choices:
self.assertTrue(
all(
isinstance(x, action.type)
for x in arg_type['symbols']))
else:
self.assertEqual(action_type, arg_type)
def test_type(self):
parser, tool = self.get_simple_tool('test-optional.py')
for action in self._strip_help_version_actions(parser._actions):
arg_type = tool.inputs[action.dest].type
if type(arg_type) is list: # if argument is optional, the first type in list is `null`
arg_type = arg_type[1] # the second is the actual type
if action.choices:
if type(action.choices) is range:
self.assertEqual(list(action.choices), arg_type['symbols'])
else:
self.assertEqual(action.choices, arg_type['symbols'])
self.assertEqual('enum', arg_type['type'])
if action.type:
if isinstance(action.type, argparse.FileType):
action_type = 'File'
else:
action_type = ac.get_cwl_type(action.type)
if (action.nargs and action.nargs != '?') \
or type(action).__name__.startswith("_Append"):
self.assertEqual('array', arg_type['type'])
self.assertEqual(action.items_type or 'string', arg_type['items'])
elif action.choices:
self.assertTrue(all(isinstance(x, action.type) for x in arg_type['symbols']))
else:
self.assertEqual(action_type, arg_type)
def test_type_conversions(self):
self.assertEqual(ac.get_cwl_type(open), 'File')
self.assertEqual(ac.get_cwl_type(argparse.FileType('r')), 'File')
self.assertEqual(ac.get_cwl_type(str), 'string')
self.assertEqual(ac.get_cwl_type('str'), 'string')
def test_type_conversions(self):
self.assertEqual(ac.get_cwl_type(open), 'File')
self.assertEqual(ac.get_cwl_type(argparse.FileType('r')), 'File')
self.assertEqual(ac.get_cwl_type(str), 'string')
self.assertEqual(ac.get_cwl_type('str'), 'string')
