Exemplo n.º 1
0
def testMaxModelsOnDisc2(ensemble_backend):
    # Test for Extreme scenarios
    # Make sure that the best predictions are kept
    ensbuilder = EnsembleBuilder(
        backend=ensemble_backend,
        dataset_name="TEST",
        task_type=BINARY_CLASSIFICATION,
        metric=roc_auc,
        seed=0,  # important to find the test files
        ensemble_nbest=50,
        max_models_on_disc=10000.0,
    )
    ensbuilder.read_preds = {}
    for i in range(50):
        ensbuilder.read_scores['pred' + str(i)] = {
            'ens_score': i * 10,
            'num_run': i,
            'loaded': 1,
            "seed": 1,
            "disc_space_cost_mb": 50 * i,
        }
        ensbuilder.read_preds['pred' + str(i)] = {Y_ENSEMBLE: True}
    sel_keys = ensbuilder.get_n_best_preds()
    assert ['pred49', 'pred48', 'pred47'] == sel_keys

    # Make sure at least one model is kept alive
    ensbuilder.max_models_on_disc = 0.0
    sel_keys = ensbuilder.get_n_best_preds()
    assert ['pred49'] == sel_keys
Exemplo n.º 2
0
    def testPerformanceRangeThresholdMaxBest(self):
        to_test = ((0.0, 1, 1), (0.0, 1.0, 4), (0.1, 2, 2), (0.3, 4, 3),
                   (0.5, 1, 1), (0.6, 10, 2), (0.8, 0.5, 1), (1, 1.0, 1))
        for performance_range_threshold, ensemble_nbest, exp in to_test:
            ensbuilder = EnsembleBuilder(
                backend=self.backend,
                dataset_name="TEST",
                task_type=1,  # Binary Classification
                metric=roc_auc,
                limit=-1,  # not used,
                seed=0,  # important to find the test files
                ensemble_nbest=ensemble_nbest,
                performance_range_threshold=performance_range_threshold,
                max_models_on_disc=None,
            )
            ensbuilder.read_preds = {
                'A': {'ens_score': 1, 'num_run': 1, 0: True, 'loaded': -1, "seed": 1},
                'B': {'ens_score': 2, 'num_run': 2, 0: True, 'loaded': -1, "seed": 1},
                'C': {'ens_score': 3, 'num_run': 3, 0: True, 'loaded': -1, "seed": 1},
                'D': {'ens_score': 4, 'num_run': 4, 0: True, 'loaded': -1, "seed": 1},
                'E': {'ens_score': 5, 'num_run': 5, 0: True, 'loaded': -1, "seed": 1},
            }
            sel_keys = ensbuilder.get_n_best_preds()

            self.assertEqual(len(sel_keys), exp)
Exemplo n.º 3
0
def testPerformanceRangeThresholdMaxBest(ensemble_backend,
                                         performance_range_threshold,
                                         ensemble_nbest, exp):
    ensbuilder = EnsembleBuilder(
        backend=ensemble_backend,
        dataset_name="TEST",
        task_type=BINARY_CLASSIFICATION,
        metric=roc_auc,
        seed=0,  # important to find the test files
        ensemble_nbest=ensemble_nbest,
        performance_range_threshold=performance_range_threshold,
        max_models_on_disc=None,
    )
    ensbuilder.read_scores = {
        'A': {
            'ens_score': 1,
            'num_run': 1,
            'loaded': -1,
            "seed": 1
        },
        'B': {
            'ens_score': 2,
            'num_run': 2,
            'loaded': -1,
            "seed": 1
        },
        'C': {
            'ens_score': 3,
            'num_run': 3,
            'loaded': -1,
            "seed": 1
        },
        'D': {
            'ens_score': 4,
            'num_run': 4,
            'loaded': -1,
            "seed": 1
        },
        'E': {
            'ens_score': 5,
            'num_run': 5,
            'loaded': -1,
            "seed": 1
        },
    }
    ensbuilder.read_preds = {
        key: {key_2: True
              for key_2 in (Y_ENSEMBLE, Y_VALID, Y_TEST)}
        for key in ensbuilder.read_scores
    }
    sel_keys = ensbuilder.get_n_best_preds()

    assert len(sel_keys) == exp
Exemplo n.º 4
0
    def testMaxModelsOnDisc(self):

        ensemble_nbest = 4
        for (test_case, exp) in [
                # If None, no reduction
            (None, 2),
                # If Int, limit only on exceed
            (4, 2),
            (1, 1),
                # If Float, translate float to # models.
                # below, mock of each file is 100 Mb and
                # 4 files .model and .npy (test/val/pred) exist
            (700.0, 1),
            (800.0, 2),
            (9999.0, 2),
        ]:
            ensbuilder = EnsembleBuilder(
                backend=self.backend,
                dataset_name="TEST",
                task_type=1,  # Binary Classification
                metric=roc_auc,
                limit=-1,  # not used,
                seed=0,  # important to find the test files
                ensemble_nbest=ensemble_nbest,
                max_models_on_disc=test_case,
            )

            with unittest.mock.patch('os.path.getsize') as mock:
                mock.return_value = 100 * 1024 * 1024
                ensbuilder.score_ensemble_preds()
                sel_keys = ensbuilder.get_n_best_preds()
                self.assertEqual(len(sel_keys), exp)

        # Test for Extreme scenarios
        # Make sure that the best predictions are kept
        ensbuilder = EnsembleBuilder(
            backend=self.backend,
            dataset_name="TEST",
            task_type=1,  # Binary Classification
            metric=roc_auc,
            limit=-1,  # not used,
            seed=0,  # important to find the test files
            ensemble_nbest=50,
            max_models_on_disc=10000.0,
        )
        ensbuilder.read_preds = {}
        for i in range(50):
            ensbuilder.read_preds['pred' + str(i)] = {
                'ens_score': i * 10,
                'num_run': i,
                0: True,
                'loaded': 1,
                "seed": 1,
                "disc_space_cost_mb": 50 * i,
            }
        sel_keys = ensbuilder.get_n_best_preds()
        self.assertListEqual(['pred49', 'pred48', 'pred47', 'pred46'],
                             sel_keys)

        # Make sure at least one model is kept alive
        ensbuilder.max_models_on_disc = 0.0
        sel_keys = ensbuilder.get_n_best_preds()
        self.assertListEqual(['pred49'], sel_keys)