def test_es_async_1():
client = connections.get_es_client('localhost:9200', True)
health = ESHealth(client)
async def main():
response = await health.async_check()
print(vars(response))
asyncio.run(main())
def test_es():
client = connections.get_es_client("localhost:9200")
indices = {None: "bts_test", "gene": "bts_test"}
metadata = BiothingsESMetadata(indices, client)
metadata.refresh()
print(metadata.biothing_metadata)
print(metadata.biothing_mappings)
print(metadata.biothing_licenses)
def test_es():
client = connections.get_es_client("localhost:9200", True)
pipeline = ESQueryPipeline(ESQueryBuilder(), ESQueryBackend(client),
ESResultFormatter())
# print(pipeline.fetch("ecf3767159a74988", rawquery=1))
print(pipeline.fetch("ecf3767159a74988", _source=['_*']))
print(pipeline.fetch("nonexists"))
print(pipeline.search("infection", scopes=["name"], _source=['_*',
'name']))
print(pipeline.search("nonexists", scopes=["name"]))
def test_es_async_3():
client = connections.get_es_client('localhost:9200', True)
health = ESHealth(client, {
'index': 'nonexists',
'id': "1017",
})
async def main():
response = await health.async_check()
print(vars(response))
asyncio.run(main())
def test_es_async_2():
client = connections.get_es_client('localhost:9200', True)
health = ESHealth(client, {
'index': 'bts_test',
'id': "1017",
'_source': ['taxid', 'symbol']
})
async def main():
response = await health.async_check()
print(vars(response))
asyncio.run(main())
def __init__(self,
builder=None,
backend=None,
formatter=None,
*args,
**kwargs):
if not builder:
from biothings.web.query.builder import ESQueryBuilder
builder = ESQueryBuilder()
if not backend:
from biothings.web.connections import get_es_client
from biothings.web.query.engine import ESQueryBackend
client = get_es_client(async_=True)
backend = ESQueryBackend(client)
if not formatter:
from biothings.web.query.formatter import ESResultFormatter
formatter = ESResultFormatter()
super().__init__(builder, backend, formatter, *args, **kwargs)