def test_log2(self):
simulation = Simulation(str(TEST_DATA_DIR / "simulation_config.json"))
simulation._config["output"]["log_file"] = "unknown"
test_obj = test_module.SpikeReport(simulation)
with pytest.raises(BluepySnapError):
with test_obj.log() as log:
log.readlines()
def setup(self):
self.simulation = Simulation(str(TEST_DATA_DIR / "simulation_config.json"))
self.test_obj = test_module.CompartmentReport(self.simulation, "section_report")["default"]
timestamps = np.linspace(0, 0.9, 10)
data = np.array([np.arange(7) + j * 0.1 for j in range(10)], dtype=np.float32)
ids = [(0, 0), (0, 1), (1, 0), (1, 1), (2, 0), (2, 1), (2, 1)]
self.df = pd.DataFrame(data=data, columns=pd.MultiIndex.from_tuples(ids), index=timestamps)
def setup(self):
self.simulation = Simulation(
str(TEST_DATA_DIR / 'simulation_config.json'))
self.test_obj = test_module.SomaReport(self.simulation,
"soma_report")["default"]
timestamps = np.linspace(0, 0.9, 10)
data = {0: timestamps, 1: timestamps + 1, 2: timestamps + 2}
self.df = pd.DataFrame(data=data, index=timestamps,
columns=[0, 1, 2]).astype(np.float32)
def setup(self):
self.simulation = Simulation(str(TEST_DATA_DIR / "simulation_config.json"))
self.test_obj = test_module.CompartmentReport(self.simulation, "section_report")
def setup(self):
self.simulation = Simulation(str(TEST_DATA_DIR / "simulation_config.json"))
self.test_obj = test_module.FrameReport(self.simulation, "section_report")["default"]
def setup(self):
self.simulation = Simulation(str(TEST_DATA_DIR / "simulation_config.json"))
self.test_obj = test_module.SomaReport(self.simulation, "soma_report")
def setup(self):
self.simulation = Simulation(
str(TEST_DATA_DIR / 'simulation_config.json'))
self.test_obj = test_module.FrameReport(self.simulation, "soma_report")
self.test_obj_info = test_module.FrameReport(self.simulation,
"section_report")
def setup(self):
self.simulation = Simulation(
str(TEST_DATA_DIR / "simulation_config.json"))
self.test_obj = test_module.SpikeReport(self.simulation)["default"]