def test_attribute_forwarder_integrity_after_copy(self):
""" Integrity of attribute forwarding following a copy()"""
dm = DistanceMatrix(data=self.m2, RowOrder=self.m2.keys(), info=self.aar)
c = dm.copy()
# dm.ID == '5'
self.assertEqual(c.ID, dm.ID)
self.assertEqual(c.Correlating, dm.Correlating)
self.assertEqual(c.Data['R'], dm.Data['R'])
c.ID = '0'
self.assertNotEqual(c.ID,dm.ID)
def test_transpose(self):
""" transpose functions as expected """
for m in self.matrices:
d = DistanceMatrix(data=m)
t = d.copy()
t.transpose()
# Note, this line will fail on a matrix where transpose = original
self.assertNotEqual(t, d)
for r in t:
for c in t[r]:
self.assertEqual(t[r][c], d[c][r])
t.transpose()
self.assertEqual(t, d)
def test_transpose(self):
""" transpose functions as expected """
for m in self.matrices:
d = DistanceMatrix(data=m)
t = d.copy()
t.transpose()
# Note, this line will fail on a matrix where transpose = original
self.assertNotEqual(t,d)
for r in t:
for c in t[r]:
self.assertEqual(t[r][c],d[c][r])
t.transpose()
self.assertEqual(t,d)
def test_copy(self):
""" Copy functions as expected"""
dm = DistanceMatrix(data=self.m2, RowOrder=self.m2.keys(), info=self.aar)
c = dm.copy()
self.assertEqual(c['A']['A'],dm['A']['A'])
self.assertEqual(c.RowOrder,dm.RowOrder)
self.assertEqual(c.ColOrder,dm.ColOrder)
self.assertEqual(c.Pad,dm.Pad)
self.assertEqual(c.Power,dm.Power)
# Make sure it's a separate object
c['A']['A'] = 999
self.assertNotEqual(c['A']['A'],dm['A']['A'])
def test_reflect(self):
""" reflect functions as expected """
for m in self.matrices:
d = DistanceMatrix(data=m)
n = d.copy()
# Only testing one method, all other are tested in superclass, so
# redundant testing is probably not necessary
n.reflect(method=largest)
for r in d.RowOrder:
for c in d.ColOrder:
if d[r][c] > d[c][r]:
goal = d[r][c]
else:
goal = d[c][r]
self.assertEqual(n[r][c], goal)
self.assertEqual(n[c][r], goal)
def test_reflect(self):
""" reflect functions as expected """
for m in self.matrices:
d = DistanceMatrix(data=m)
n = d.copy()
# Only testing one method, all other are tested in superclass, so
# redundant testing is probably not necessary
n.reflect(method=largest)
for r in d.RowOrder:
for c in d.ColOrder:
if d[r][c] > d[c][r]:
goal = d[r][c]
else:
goal = d[c][r]
self.assertEqual(n[r][c],goal)
self.assertEqual(n[c][r],goal)