def test_load_tabular_motif_counts_array(self):
"""correctly loads tabular data for MotifCountsArray"""
data = [[2, 4], [3, 5], [4, 8]]
mca = MotifCountsArray(data, "AB")
loader = io_app.load_tabular(sep="\t", as_type="motif_counts")
with TemporaryDirectory(dir=".") as dirname:
writer = io_app.write_tabular(data_path=dirname, format="tsv")
outpath = join(dirname, "delme.tsv")
writer.write(mca, identifier=outpath)
new = loader(outpath)
self.assertEqual(mca.to_dict(), new.to_dict())
def test_to_dict(self):
"""correctly converts to a dict"""
motifs = ["A", "C", "D"]
counts = [[4, 0, 0]]
marr = MotifCountsArray(counts, motifs)
self.assertEqual(marr.to_dict(), {0: {"A": 4, "C": 0, "D": 0}})