def execute(self, commands):
     super(Executor, self).execute(commands)
     commands_parser.write_commands_to_sh(
         commands,
         os.path.join(options_storage.args.output_dir, "run_spades.sh"))
     commands_parser.write_commands_to_yaml(
         commands,
         os.path.join(options_storage.args.output_dir, "run_spades.yaml"))
Exemplo n.º 2
0
 def dump_commands(self, commands, outputfile):
     commands_parser.write_commands_to_sh(commands, outputfile)