def save(self):
"""Save the config to a file"""
dbg('ConfigBase::save: saving config')
parser = ConfigObj()
parser.indent_type = ' '
for section_name in ['global_config', 'keybindings']:
dbg('ConfigBase::save: Processing section: %s' % section_name)
section = getattr(self, section_name)
parser[section_name] = dict_diff(DEFAULTS[section_name], section)
parser['profiles'] = {}
for profile in self.profiles:
dbg('ConfigBase::save: Processing profile: %s' % profile)
parser['profiles'][profile] = dict_diff(
DEFAULTS['profiles']['default'], self.profiles[profile])
parser['layouts'] = {}
for layout in self.layouts:
dbg('ConfigBase::save: Processing layout: %s' % layout)
parser['layouts'][layout] = self.layouts[layout]
parser['plugins'] = {}
for plugin in self.plugins:
dbg('ConfigBase::save: Processing plugin: %s' % plugin)
parser['plugins'][plugin] = self.plugins[plugin]
config_dir = get_config_dir()
if not os.path.isdir(config_dir):
os.makedirs(config_dir)
try:
parser.write(open(os.path.join(config_dir, 'config'), 'w'))
except Exception, ex:
err('ConfigBase::save: Unable to save config: %s' % ex)
def save(self):
"""Save the config to a file"""
dbg('ConfigBase::save: saving config')
parser = ConfigObj()
parser.indent_type = ' '
for section_name in ['global_config', 'keybindings']:
dbg('ConfigBase::save: Processing section: %s' % section_name)
section = getattr(self, section_name)
parser[section_name] = dict_diff(DEFAULTS[section_name], section)
parser['profiles'] = {}
for profile in self.profiles:
dbg('ConfigBase::save: Processing profile: %s' % profile)
parser['profiles'][profile] = dict_diff(
DEFAULTS['profiles']['default'], self.profiles[profile])
parser['layouts'] = {}
for layout in self.layouts:
dbg('ConfigBase::save: Processing layout: %s' % layout)
parser['layouts'][layout] = self.layouts[layout]
parser['plugins'] = {}
for plugin in self.plugins:
dbg('ConfigBase::save: Processing plugin: %s' % plugin)
parser['plugins'][plugin] = self.plugins[plugin]
config_dir = get_config_dir()
if not os.path.isdir(config_dir):
os.makedirs(config_dir)
try:
parser.write(open(self.command_line_options.config, 'w'))
except Exception, ex:
err('ConfigBase::save: Unable to save config: %s' % ex)
def save(self):
"""Save the config to a file"""
dbg("ConfigBase::save: saving config")
parser = ConfigObj()
parser.indent_type = " "
for section_name in ["global_config", "keybindings"]:
dbg("ConfigBase::save: Processing section: %s" % section_name)
section = getattr(self, section_name)
parser[section_name] = dict_diff(DEFAULTS[section_name], section)
parser["profiles"] = {}
for profile in self.profiles:
dbg("ConfigBase::save: Processing profile: %s" % profile)
parser["profiles"][profile] = dict_diff(DEFAULTS["profiles"]["default"], self.profiles[profile])
parser["layouts"] = {}
for layout in self.layouts:
dbg("ConfigBase::save: Processing layout: %s" % layout)
parser["layouts"][layout] = self.layouts[layout]
parser["plugins"] = {}
for plugin in self.plugins:
dbg("ConfigBase::save: Processing plugin: %s" % plugin)
parser["plugins"][plugin] = self.plugins[plugin]
config_dir = get_config_dir()
if not os.path.isdir(config_dir):
os.makedirs(config_dir)
try:
parser.write(open(self.command_line_options.config, "w"))
except Exception, ex:
err("ConfigBase::save: Unable to save config: %s" % ex)
def save(self, force=False):
"""Save the config to a file"""
if self._nosave:
dbg('~ConfigBase::save: WRITE SUPRESSED')
return (True)
elif force:
dbg('~ConfigBase::save: WRITE FORCED')
pass
elif not self._dirty:
dbg('~ConfigBase::save: CONFIG CLEAN')
return (True)
dbg('~ConfigBase::save: WRITE CONFIG')
self._dirty = False
# FIXME this craziness must be purged asap.
parser = ConfigObj()
parser.indent_type = ' '
for section_name in ['global_config', 'keybindings']:
dbg('ConfigBase::save: Processing section: %s' % section_name)
section = getattr(self, section_name)
parser[section_name] = dict_diff(DEFAULTS[section_name], section)
parser['profiles'] = {}
for profile in self.profiles:
dbg('ConfigBase::save: Processing profile: %s' % profile)
parser['profiles'][profile] = dict_diff(
DEFAULTS['profiles']['default'], self.profiles[profile])
parser['layouts'] = {}
for layout in self.layouts:
dbg('ConfigBase::save: Processing layout: %s' % layout)
parser['layouts'][layout] = self.cleancfg(self.layouts[layout])
parser['plugins'] = {}
for plugin in self.plugins:
dbg('ConfigBase::save: Processing plugin: %s' % plugin)
parser['plugins'][plugin] = self.plugins[plugin]
config_dir = get_config_dir()
if not os.path.isdir(config_dir):
os.makedirs(config_dir)
try:
parser.write(open(self.command_line_options.config, 'w'))
except Exception, ex:
err('ConfigBase::save: Unable to save config: %s' % ex)
def defaults_to_configspec(self):
"""Convert our tree of default values into a ConfigObj validation
specification"""
configspecdata = {}
keymap = {
'int': 'integer',
'str': 'string',
'bool': 'boolean',
}
section = {}
for key in DEFAULTS['global_config']:
keytype = DEFAULTS['global_config'][key].__class__.__name__
value = DEFAULTS['global_config'][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == 'list':
value = 'list(%s)' % ','.join(value)
keytype = '%s(default=%s)' % (keytype, value)
section[key] = keytype
configspecdata['global_config'] = section
section = {}
for key in DEFAULTS['keybindings']:
value = DEFAULTS['keybindings'][key]
if value is None or value == '':
continue
section[key] = 'string(default=%s)' % value
configspecdata['keybindings'] = section
section = {}
for key in DEFAULTS['profiles']['default']:
keytype = DEFAULTS['profiles']['default'][key].__class__.__name__
value = DEFAULTS['profiles']['default'][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == 'list':
value = 'list(%s)' % ','.join(value)
if keytype == 'string':
value = '"%s"' % value
keytype = '%s(default=%s)' % (keytype, value)
section[key] = keytype
configspecdata['profiles'] = {}
configspecdata['profiles']['__many__'] = section
section = {}
section['type'] = 'string'
section['parent'] = 'string'
section['profile'] = 'string(default=default)'
section['command'] = 'string(default="")'
section['position'] = 'string(default="")'
section['size'] = 'list(default=list(-1,-1))'
configspecdata['layouts'] = {}
configspecdata['layouts']['__many__'] = {}
configspecdata['layouts']['__many__']['__many__'] = section
configspecdata['plugins'] = {}
configspec = ConfigObj(configspecdata)
if DEBUG == True:
configspec.write(open('/tmp/terminator_configspec_debug.txt', 'w'))
return (configspec)
def defaults_to_configspec(self):
"""Convert our tree of default values into a ConfigObj validation
specification"""
configspecdata = {}
keymap = {
'int': 'integer',
'str': 'string',
'bool': 'boolean',
}
section = {}
for key in DEFAULTS['global_config']:
keytype = DEFAULTS['global_config'][key].__class__.__name__
value = DEFAULTS['global_config'][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == 'list':
value = 'list(%s)' % ','.join(value)
keytype = '%s(default=%s)' % (keytype, value)
if key == 'custom_url_handler':
keytype = 'string(default="")'
section[key] = keytype
configspecdata['global_config'] = section
section = {}
for key in DEFAULTS['keybindings']:
value = DEFAULTS['keybindings'][key]
if value is None or value == '':
continue
section[key] = 'string(default=%s)' % value
configspecdata['keybindings'] = section
section = {}
for key in DEFAULTS['profiles']['default']:
keytype = DEFAULTS['profiles']['default'][key].__class__.__name__
value = DEFAULTS['profiles']['default'][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == 'list':
value = 'list(%s)' % ','.join(value)
if key == 'background_image':
keytype = 'string'
if keytype == 'string':
value = '"%s"' % value
keytype = '%s(default=%s)' % (keytype, value)
section[key] = keytype
configspecdata['profiles'] = {}
configspecdata['profiles']['__many__'] = section
section = {}
section['type'] = 'string'
section['parent'] = 'string'
section['profile'] = 'string(default=default)'
section['command'] = 'string(default="")'
section['position'] = 'string(default="")'
section['size'] = 'list(default=list(-1,-1))'
configspecdata['layouts'] = {}
configspecdata['layouts']['__many__'] = {}
configspecdata['layouts']['__many__']['__many__'] = section
configspecdata['plugins'] = {}
configspec = ConfigObj(configspecdata)
if DEBUG == True:
configspec.write(open('/tmp/terminator_configspec_debug.txt', 'w'))
return(configspec)
def defaults_to_configspec(self):
"""Convert our tree of default values into a ConfigObj validation
specification"""
configspecdata = {}
keymap = {"int": "integer", "str": "string", "bool": "boolean"}
section = {}
for key in DEFAULTS["global_config"]:
keytype = DEFAULTS["global_config"][key].__class__.__name__
value = DEFAULTS["global_config"][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == "list":
value = "list(%s)" % ",".join(value)
keytype = "%s(default=%s)" % (keytype, value)
if key == "custom_url_handler":
keytype = 'string(default="")'
section[key] = keytype
configspecdata["global_config"] = section
section = {}
for key in DEFAULTS["keybindings"]:
value = DEFAULTS["keybindings"][key]
if value is None or value == "":
continue
section[key] = "string(default=%s)" % value
configspecdata["keybindings"] = section
section = {}
for key in DEFAULTS["profiles"]["default"]:
keytype = DEFAULTS["profiles"]["default"][key].__class__.__name__
value = DEFAULTS["profiles"]["default"][key]
if keytype in keymap:
keytype = keymap[keytype]
elif keytype == "list":
value = "list(%s)" % ",".join(value)
if key == "background_image":
keytype = "string"
if keytype == "string":
value = '"%s"' % value
keytype = "%s(default=%s)" % (keytype, value)
section[key] = keytype
configspecdata["profiles"] = {}
configspecdata["profiles"]["__many__"] = section
section = {}
section["type"] = "string"
section["parent"] = "string"
section["profile"] = "string(default=default)"
section["command"] = 'string(default="")'
section["position"] = 'string(default="")'
section["size"] = "list(default=list(-1,-1))"
configspecdata["layouts"] = {}
configspecdata["layouts"]["__many__"] = {}
configspecdata["layouts"]["__many__"]["__many__"] = section
configspecdata["plugins"] = {}
configspec = ConfigObj(configspecdata)
if DEBUG == True:
configspec.write(open("/tmp/terminator_configspec_debug.txt", "w"))
return configspec
def getUserInput():
"""
Interactive input session based on Sphinx's interactive setup.
"""
logging.info("\nGood day! Press enter to accept default reduction options.")
fullReduction = getParam(
"Do a full data reduction with default parameters loaded from recipes/default_input.cfg? [no]: ",
False,
"Type yes to start Nifty with data reduction input parameters loaded from recipes/default_input.cfg file."
)
if fullReduction == False:
# "Select in". User has to turn individual steps on.
# TODO(nat): Implement these steps.
date = ""
program = ""
copy = ""
sort = getParam(
"Sort data? [no]: ",
False
)
rawPath = getParam(
"Path to raw files directory? [~/data]: ",
"~/data"
)
tel = getParam(
"Apply a telluric correction? [no]: ",
False
)
# See if we want to reduce the baseline calibrations. And if so, which substeps
# to perform.
calibrationReduction = getParam(
"Reduce baseline calibrations? [no]: ",
False
)
# By default do all of them.
rstart = getParam(
"Starting point of baseline calibration reductions? [1]: ",
1
)
rstop = getParam(
"Stopping point of baseline calibration reductions? [4]: ",
4
)
# Check for tellurics as well; by default do all reduction steps.
telluricReduction = getParam(
"Reduce telluric data? [no]: ",
False
)
telStart = getParam(
"Starting point of science and telluric reductions? [1]: ",
1
)
telStop = getParam(
"Stopping point of science and telluric reductions? [6]: ",
6
)
# Set the telluric application correction method. Choices are iraf.telluric and a python variant.
# Set the h-line removal method with the vega() function in nifsReduce as default.
hline_method = getParam(
"H-line removal method? [vega]: ",
"vega"
)
# Set yes or no for interactive the h line removal, telluric correction, and continuum fitting
hlineinter = getParam(
"Interative H-line removal? [no]: ",
False
)
continuuminter = getParam(
"Interative telluric continuum fitting? [no]: ",
False
)
telluric_correction_method = getParam(
"Telluric correction method? [python]: ",
"python"
)
telinter = getParam(
"Interactive telluric correction? [no]: ",
False
)
# Check for science as well.
scienceReduction = getParam(
"Reduce science data? [no]: ",
False
)
sciStart = getParam(
"Starting point of science and telluric reductions? [1]: ",
1
)
sciStop = getParam(
"Stopping point of science and telluric reductions? [6]: ",
6
)
efficiencySpectrumCorrection = getParam(
"Do a flux calibration? [no]: ",
False
)
spectemp = getParam(
"Effective temperature in kelvin of telluric standard star? [""]: ",
""
)
mag = getParam(
"Magnitude of standard star? [""]: ",
""
)
merge = getParam(
"Produce one final 3D cube? [no]: ",
False
)
use_pq_offsets = getParam(
"Use pq offsets to merge data cubes? [yes]: ",
"yes"
)
im3dtran = getParam(
"Transpose cubes for faster merging? [no]: ",
False
)
over = getParam(
"Overwrite old files? [no]: ",
False
)
debug = getParam(
"Pause after each data reduction step? [yes]: ",
"yes"
)
# Serialize and save the options as a .cfg file.
options = ConfigObj(unrepr=True)
options['date'] = date
options['program'] = program
options['rawPath'] = rawPath
options['over'] = over
options['copy'] = copy
options['sort'] = sort
options['calibrationReduction'] = calibrationReduction
options['scienceReduction'] = scienceReduction
options['merge'] = merge
options['tel'] = tel
options['telluricReduction'] = telluricReduction
options['spectemp'] = spectemp
options['mag'] = mag
options['efficiencySpectrumCorrection'] = efficiencySpectrumCorrection
options['rstart']= rstart
options['rstop'] = rstop
options['telStart'] = telStart
options['telStop'] = telStop
options['sciStart'] = sciStart
options['sciStop'] = sciStop
options['hline_method'] = hline_method
options['hlineinter'] = hlineinter
options['continuuminter'] = continuuminter
options['telluric_correction_method'] = telluric_correction_method
options['telinter'] = telinter
options['use_pq_offsets'] = use_pq_offsets
options['im3dtran'] = im3dtran
options['debug'] = debug
with open(RUNTIME_DATA_PATH+'/config.cfg', 'w') as outfile:
options.write(outfile)
return fullReduction
