def test__to_dict_2(self):
contact = Contact(1, 2, 1.0)
contact.define_match()
contact.lower_bound = 4
answer_dict = {
'id': (1, 2),
'is_match': True,
'is_mismatch': False,
'is_unknown': False,
'distance_bound': (4.0, 8.0),
'lower_bound': 4.0,
'upper_bound': 8.0,
'raw_score': 1.0,
'res1': 'X',
'res2': 'X',
'res1_chain': '',
'res2_chain': '',
'res1_seq': 1,
'res2_seq': 2,
'res1_altseq': 0,
'res2_altseq': 0,
'scalar_score': 0.0,
'status': 1,
'weight': 1.0,
}
contact_dict = contact._to_dict()
for k in answer_dict.keys():
self.assertEqual(answer_dict[k], contact_dict[k],
"Key %s differs" % k)
def test__to_dict_2(self):
contact = Contact(1, 2, 1.0)
contact.true_positive = True
contact.lower_bound = 4
answer_dict = {
"id": (1, 2),
"true_positive": True,
"false_positive": False,
"status_unknown": False,
"distance_bound": (4.0, 8.0),
"lower_bound": 4.0,
"upper_bound": 8.0,
"raw_score": 1.0,
"res1": "X",
"res2": "X",
"res1_chain": "",
"res2_chain": "",
"res1_seq": 1,
"res2_seq": 2,
"res1_altseq": 0,
"res2_altseq": 0,
"scalar_score": 0.0,
"status": 1,
"weight": 1.0,
}
contact_dict = contact._to_dict()
for k in answer_dict.keys():
self.assertEqual(answer_dict[k], contact_dict[k],
"Key {} differs".format(k))
def test__to_dict_1(self):
contact = Contact(1, 2, 1.0)
answer_dict = {
'id': (1, 2),
'true_positive': False,
'false_positive': False,
'status_unknown': True,
'distance_bound': (0.0, 8.0),
'lower_bound': 0.0,
'upper_bound': 8.0,
'raw_score': 1.0,
'res1': 'X',
'res2': 'X',
'res1_chain': '',
'res2_chain': '',
'res1_seq': 1,
'res2_seq': 2,
'res1_altseq': 0,
'res2_altseq': 0,
'scalar_score': 0.0,
'status': 0,
'weight': 1.0,
}
contact_dict = contact._to_dict()
for k in answer_dict.keys():
self.assertEqual(answer_dict[k], contact_dict[k],
"Key %s differs" % k)
