Exemplo n.º 1
0
 def __init__(self, copy=None):
   if copy:
     if isinstance(copy, dict):
       for k,v in copy.items():
         dict.__setitem__(self, k.lower(), v)
     else:
       for k,v in copy:
         dict.__setitem__(self, k.lower(), v)
Exemplo n.º 2
0
 def __init__(self, copy=None):
   if copy:
     if isinstance(copy, dict):
       for k,v in copy.items():
         dict.__setitem__(self, k.lower(), v)
     else:
       for k,v in copy:
         dict.__setitem__(self, k.lower(), v)
Exemplo n.º 3
0
 def sell_all(self):
     """Sells all stocks owned"""
     copy = self.stocks_owned
     for ticker, val in copy.items():
         self.funds += (self.stocks_owned[ticker]["quantity"] *
                        self.stocks_owned[ticker]["current_p"]) - self.TRANSACTION_FEE
         self.transactions += 1
         del self.stocks_owned[ticker]
Exemplo n.º 4
0
 def sell_all(self):
     """Sells all stocks owned"""
     copy = self.stocks_owned
     for ticker, val in copy.items():
         self.funds += (
             self.stocks_owned[ticker]["quantity"] *
             self.stocks_owned[ticker]["current_p"]) - self.TRANSACTION_FEE
         self.transactions += 1
         del self.stocks_owned[ticker]
Exemplo n.º 5
0
    def test_form_params_deepish_copy(self):
        form = create_form_params_helper(form_with_radio + form_with_checkbox)
        copy = form.deepish_copy()

        self.assertEqual(form.items(), copy.items())
        self.assertEqual(form._method, copy._method)
        self.assertEqual(form._action, copy._action)

        self.assertIsNot(form, copy)
        self.assertEquals(copy.get_parameter_type('sex'), INPUT_TYPE_RADIO)
Exemplo n.º 6
0
    def test_form_params_deepish_copy(self):
        form = create_form_params_helper(form_with_radio + form_with_checkbox)
        copy = form.deepish_copy()

        self.assertEqual(form.items(), copy.items())
        self.assertEqual(form._method, copy._method)
        self.assertEqual(form._action, copy._action)

        self.assertIsNot(form, copy)
        self.assertEquals(copy.get_parameter_type('sex'), INPUT_TYPE_RADIO)
Exemplo n.º 7
0
    def test_form_params_deepish_copy(self):
        form = create_form_params_helper(form_with_radio + form_with_checkbox)
        copy = form.deepish_copy()

        self.assertEqual(form.items(), copy.items())
        self.assertEqual(form._method, copy._method)
        self.assertEqual(form._action, copy._action)
        self.assertEqual(form._types, copy._types)
        self.assertEqual(form._file_vars, copy._file_vars)
        self.assertEqual(form._file_names, copy._file_names)
        self.assertEqual(form._selects, copy._selects)
        self.assertEqual(form._submit_map, copy._submit_map)

        self.assertIsNot(form, copy)
        self.assertEquals(copy.get_parameter_type('sex'),
                          FormParameters.INPUT_TYPE_RADIO)
Exemplo n.º 8
0
    def get_p_distance(self):
        """returns the average and max p-distance of alignment"""
        if self.is_empty():
            raise ValueError("The alignment is empty.\n")
        max = 0
        average = 0.0
        count = 0.0
        copy = MutableAlignment()
        copy.set_alignment(self)
        names = copy.get_sequence_names()
        for name, val in copy.items():
            copy[name] = val.replace('-', chr(255)).lower()

        for x in range(0, self.get_num_taxa()):
            for y in range(x + 1, self.get_num_taxa()):
                distance = hamming_distance(copy[names[x]], copy[names[y]])
                if distance >= 0:
                    if distance > max:
                        max = distance
                    count += 1
                    average += distance
        average = average / count
        return (average, max)
Exemplo n.º 9
0
    def get_p_distance(self):
        """returns the average and max p-distance of alignment"""
        if self.is_empty():
            raise ValueError("The alignment is empty.\n")
        max = 0
        average = 0.0
        count = 0.0
        copy = MutableAlignment()
        copy.set_alignment(self)
        names = copy.get_sequence_names()
        for name, val in copy.items():
            copy[name] = val.replace('-', chr(255)).lower()

        for x in range(0, self.get_num_taxa()):
            for y in range(x+1, self.get_num_taxa()):
                distance = hamming_distance(copy[names[x]], copy[names[y]])
                if distance >= 0:
                    if distance > max:
                        max = distance
                    count += 1
                    average += distance
        average = average / count
        return (average, max)
Exemplo n.º 10
0
 def update(self, copy):
     for k, v in copy.items():
         dict.__setitem__(self, k.lower(), v)
Exemplo n.º 11
0
 def update(self, copy):
   for k,v in copy.items():
     dict.__setitem__(self, k.lower(), v)