def yield_ndex(ndex_url):
element = cx_pb2.Element()
netAttr = element.networkAttribute
netAttr.name = 'ndex_uuid'
netAttr.value = parse_ndex_uuid(ndex_url)
yield element
element = cx_pb2.Element()
netAttr = element.networkAttribute
netAttr.name = 'ndex_url'
netAttr.value = ndex_url
yield element
def create_edgeAttribute(self, edge_id, key, val):
element = cx_pb2.Element()
attr = element.edgeAttribute
attr.edgeId = edge_id
attr.name = key
attr.value = val
return element
def create_edge(self, edge_id, node1, node2):
element = cx_pb2.Element()
edge = element.edge
edge.id = edge_id
edge.sourceId = node1
edge.targetId = node2
return element
def create_nodeAttribute(self, node_id, key, val):
element = cx_pb2.Element()
attr = element.nodeAttribute
attr.nodeId = node_id
attr.name = key
attr.value = val
return element
def create_internal_crash_error(self, message, status):
element = cx_pb2.Element()
error = element.error
error.status = status
error.code = 'clixo_service/' + str(status)
error.message = message
error.link = 'https://github.com/michaelkyu/ontology_cx'
return element
def create_internal_crash_error(self, message, status):
element = cx_pb2.Element()
error = element.error
error.status = status
error.code = 'cy://align-hierarchies/' + str(status)
error.message = message
error.link = 'http://align-hierarchies'
return element
def create_node(self, node_id, node_name):
element = cx_pb2.Element()
node = element.node
node.id = node_id
node.name = node_name
return element
