def testGcContentPercentageFromFile(self):
with open('data/gcContent.fasta') as fp:
gcContents = {name: gcContentPercentage(seq)
for name, seq in read_fasta(fp)}
maxName, maxGc = max(gcContents.iteritems(), key=operator.itemgetter(1))
self.assertEqual('Rosalind_6020', maxName)
self.assertAlmostEqual(51.881994, maxGc, places=5)
def testGcContentPercentageFromFile(self):
with open('data/gcContent.fasta') as fp:
gcContents = {
name: gcContentPercentage(seq)
for name, seq in read_fasta(fp)
}
maxName, maxGc = max(gcContents.iteritems(),
key=operator.itemgetter(1))
self.assertEqual('Rosalind_6020', maxName)
self.assertAlmostEqual(51.881994, maxGc, places=5)
def testGcContentPercentage(self):
self.assertEqual(37.5, gcContentPercentage('AGCTATAG'))
def testGcContentPercentage(self):
self.assertEqual(37.5, gcContentPercentage('AGCTATAG'))
