def get_slices():
with open(slice_file) as f:
sast = parse(f.read())
slices = dict()
for gast in sast.children:
sg = Graph.build('dot', gast)
slices[gast.children[1].label] = sg
return slices
def test_dot_tools(process):
runner = fair_bpm.FlexibleJobRunner()
job = process.createJob(111)
runner.execute_job(job)
tree = parse(job.to_dot())
assert len(str(tree)) > 10
g = SimpleGraph.build(tree.kid('Graph'))
assert len(g.nodes) == 4
assert len(g.edges) == 3
assert g.nodes['id44']['state'] == 'COMPLETE'
def test_run_job(process):
ps = process
runner = fair_bpm.FlexibleJobRunner()
print("ps=" + str(ps))
job = ps.createJob(111)
runner.execute_job(job)
tree = parse(job.to_dot())
g = SimpleGraph.build(tree.kid('Graph'))
for node in g.nodes:
# print("Node -> "+str(node))
assert g.nodes[node]['state'] == 'COMPLETE'
def get_subgraphs(slices):
with open(pattern_file) as f:
past = parse(f.read())
subgraphs = list()
for i in xrange(0, len(past.children), 2):
gast = past.children[i]
comment = past.children[i+1].children[0].label
sg = Graph.build('dot', gast)
labels = set(label for label in sg.nodes.itervalues())
if ((label is None or label in labels)
and any(l.startswith('3:call') and 'Iterator' not in l
for l in labels)
):
subgraphs.append((sg,
[slices[e] for e in parse_examples(comment)]))
return subgraphs
def parse(cls, dot):
tree = parse(dot)
id = tree.kid('Graph').children[1].label
g = SimpleGraph.build(tree.kid('Graph'))
ps = Process(id)
for node in g.nodes:
#print("About to parse node "+str(node))
ps.activities.append(Activity.parse_from_dot(node, g.nodes[node]))
for edge in g.edges:
parent = ps.find_activity_by_id(edge[0])
child = ps.find_activity_by_id(edge[1])
if edge[2]:
child.add_parent([parent.id, edge[2]])
else:
child.add_parent(parent.id)
return ps
from dot_tools import parse
from dot_tools.dot_graph import SimpleGraph
import pickle
import sys
import warnings
warnings.filterwarnings("ignore")
filename = sys.argv[1]
with open(filename,"r") as fin:
dotStr = fin.read()
tree = parse(dotStr)
g = SimpleGraph.build(tree.kid('Graph'))
#print g.nodes.keys()
#print g.edges
try:
name = filename.split('/')[-1].split('.')[0]
except:
name = "pickle_file"
with open(name+".pickle","wb") as fin:
pickle.dump(g.nodes.keys(),fin)
pickle.dump(g.edges,fin)
def parse_to_simple_graph(cls, dot):
tree = parse(dot)
g = SimpleGraph.build(tree.kid('Graph'))
return g
# coding: utf-8
# In[6]:
from dot_tools import parse
with open("8.dot", "r") as myfile:
data = myfile.read()
# In[9]:
data = data.replace("Digraph", "digraph")
# In[10]:
tree = parse(data)
# In[11]:
from dot_tools.dot_graph import SimpleGraph
# In[12]:
g = SimpleGraph.build(tree.kid('Graph'))
# In[13]:
constant = ' "id":"1", "fontcolor":"blue","shape":"plaintext","label":"Cluster ID: 1344\\nSpecific Mutation Type: Response time change\\nCost: 206331909\\nOverall Mutation Type: Originating_Cluster and_Response_Time_Change\\nCandidate originating clusters: \\n\\nAvg. response times: 42170 us ; 70959 us\\nStandard Deviations: 7580 us ; 13811 us\\nKS-Test2 P-value: 0.000\\nCluster likelihood: 0.0340 ; 0.0291\\nPercent makeup: 54 / 46\\nrequests: 7167 ; 6082" '
# In[20]:
import json
def DOTParser(pdgfile):
with open(pdgfile, "r") as fin:
dotStr = fin.read()
tree = parse(dotStr)
graph = SimpleGraph.build(tree.kid('Graph'))
return graph
# pip install ply betterast
from dot_tools import parse
tree = parse('digraph { x [label=<<b>I am an html label</b>>] x -> y }')
print tree
print tree.dotty()