def test_scoring_topology_leaderboard():
s = scoring.D7C1()
try:
s.compute_score_topology()
assert all(
s.scores['topo2'].scores == [2, 3, 4, 4, 5, 6, 7, 8, 8, 8, 9, 12])
except:
# needs all submissions
pass
def test_scoring_model1():
s = scoring.D7C1(path='D7C1/submissions')
################## model1 parameters:
# best performer
filename = s.download_template('parameter')
score = s.score(filename, 'parameter')
nose.tools.assert_almost_equal(score['score'], 0.02286755)
# gold standard
filename = s.download_goldstandard('parameter')
score = s.score_model1_parameters(filename)
assert score == 0
def _test_others():
s = scoring.D7C1()
df = s.get_null_parameters_model1()
def test_scoring_timecourse():
s = scoring.D7C1()
filename = s.download_template('timecourse')
score = s.score(filename, 'timecourse')['score']
nose.tools.assert_almost_equal(score, 0.002438361267)
def test_scoring_parameters():
s = scoring.D7C1()
filename = s.download_template('parameter')
score = s.score(filename, 'parameter')['score']
nose.tools.assert_almost_equal(score, 0.02286755501)
def test_scoring_topology():
s = scoring.D7C1()
filename = s.download_template('topology')
score = s.score(filename, 'topology')['score']
assert score == 4