Exemplo n.º 1
0
import eNeuro_fig_defaults as fd
import eNeuro_fig_01_and_02_pert as op
import eNeuro_fig_07_pert_conn as op_add
import sys
import scripts_inhibition.base_oscillation_beta as module
import pprint

pp = pprint.pprint

path_rate_runs = get_path_rate_runs('eNeuro_fig_01_and_02_sim_inh/')
FILE_NAME = __file__.split('/')[-1][0:-3]
FROM_DISK_0 = int(sys.argv[1]) if len(sys.argv) > 1 else 1
LOAD_MILNER_ON_SUPERMICRO = False

ops = [op.get()[fd.idx_beta]]
amp_base = [fd.amp_beta]  #numpy.arange(1.05, 1.2, 0.05)
freqs = [fd.freq_beta]  #numpy.arange(0.5, .8, 0.2)
STN_amp_mod = [fd.STN_amp_mod_beta]

NUM_RUNS = len(op_add.get([0, 6]))
NUM_NETS = 2
num_sims = NUM_NETS * NUM_RUNS

dc = my_socket.determine_computer
CORES = 40 * 4 if dc() == 'milner' else 10
JOB_ADMIN = config.Ja_milner if dc() == 'milner' else config.Ja_else
LOCAL_NUM_THREADS = 40 if dc() == 'milner' else 10
WRAPPER_PROCESS = config.Wp_milner if dc() == 'milner' else config.Wp_else

kwargs = {
import config
import scripts_inhibition.base_inhibition_striatum as module
import eNeuro_fig_01_and_02_pert as op
import pprint
pp=pprint.pprint




FILE_NAME=__file__.split('/')[-1][0:-3]
FROM_DISK_0=0

NUM_NETS=1

#ops=[val for val in op.get().values()]
ops=op.get()#ops[0]+ops[1]

NUM_RUNS=len(ops) #A run for each perturbation
num_sim=NUM_NETS*NUM_RUNS

dc=my_socket.determine_computer
CORES=40 if dc()=='milner' else 3
JOB_ADMIN=config.Ja_milner if dc()=='milner' else config.Ja_else
LOCAL_NUM_THREADS= 20 if dc()=='milner' else 3
WRAPPER_PROCESS=config.Wp_milner if dc()=='milner' else config.Wp_else

kwargs={
        'Builder':Builder,
                             
        'cores':CORES,
        
from core import my_socket

import eNeuro_fig_defaults as fd
import eNeuro_fig_01_and_02_pert as op
import eNeuro_fig_07_pert_nuclei as op_neuclei
import sys
import scripts_inhibition.base_oscillation_beta as module
import pprint
pp=pprint.pprint

path_rate_runs=get_path_rate_runs('eNeuro_fig_01_and_02_sim_inh/')
FILE_NAME=__file__.split('/')[-1][0:-3]
FROM_DISK_0=int(sys.argv[1]) if len(sys.argv)>1 else 0
LOAD_MILNER_ON_SUPERMICRO=False

ops=[op.get()[fd.idx_beta]]
amp_base=[fd.amp_beta] #numpy.arange(1.05, 1.2, 0.05)
freqs=[fd.freq_beta] #numpy.arange(0.5, .8, 0.2)
STN_amp_mod=[fd.STN_amp_mod_beta]

NUM_NETS=2
NUM_RUNS=len(op_neuclei.get([0,7])) #A run for each perturbation
num_sim=NUM_NETS*NUM_RUNS

dc=my_socket.determine_computer
CORES=40*4 if dc()=='milner' else 10
JOB_ADMIN=config.Ja_milner if dc()=='milner' else config.Ja_else
LOCAL_NUM_THREADS= 40 if dc()=='milner' else 10
WRAPPER_PROCESS=config.Wp_milner if dc()=='milner' else config.Wp_else

kwargs={
Exemplo n.º 4
0
from core import my_socket

import config
import scripts_inhibition.base_inhibition_striatum as module
import eNeuro_fig_01_and_02_pert as op
import sys
import pprint
pp = pprint.pprint

# dr.HOME_DATA='/home/mikael/results/papers/inhibition/network/milner'

FILE_NAME = __file__.split('/')[-1][0:-3]
FROM_DISK_0 = int(sys.argv[1]) if len(sys.argv) > 1 else 1

NUM_NETS = 6
ops = op.get()
NUM_RUNS = len(ops)  #A run for each perturbation
num_sims = NUM_NETS * NUM_RUNS

dc = my_socket.determine_computer
CORES = 40 * 2 if dc() == 'milner' else 4
JOB_ADMIN = config.Ja_milner if dc() == 'milner' else config.Ja_else
LOCAL_NUM_THREADS = 20 if dc() == 'milner' else 1
WRAPPER_PROCESS = config.Wp_milner if dc() == 'milner' else config.Wp_else

kwargs = {
    'Builder': Builder,
    'cores': CORES,
    'file_name': FILE_NAME,
    'from_disk_0': FROM_DISK_0,
    'debug': False,
                                              pert_add_inhibition)
from core import my_socket

import config
import scripts_inhibition.base_inhibition_striatum as module
import eNeuro_fig_01_and_02_pert as op
import pprint
pp = pprint.pprint

FILE_NAME = __file__.split('/')[-1][0:-3]
FROM_DISK_0 = 0

NUM_NETS = 1

#ops=[val for val in op.get().values()]
ops = op.get()  #ops[0]+ops[1]

NUM_RUNS = len(ops)  #A run for each perturbation
num_sim = NUM_NETS * NUM_RUNS

dc = my_socket.determine_computer
CORES = 40 if dc() == 'milner' else 3
JOB_ADMIN = config.Ja_milner if dc() == 'milner' else config.Ja_else
LOCAL_NUM_THREADS = 20 if dc() == 'milner' else 3
WRAPPER_PROCESS = config.Wp_milner if dc() == 'milner' else config.Wp_else

kwargs = {
    'Builder': Builder,
    'cores': CORES,
    'file_name': FILE_NAME,
    'from_disk_0': FROM_DISK_0,
Exemplo n.º 6
0
from core import my_socket

import config
import scripts_inhibition.base_inhibition_striatum as module
import eNeuro_fig_01_and_02_pert as op
import sys
import pprint
pp=pprint.pprint

# dr.HOME_DATA='/home/mikael/results/papers/inhibition/network/milner'

FILE_NAME=__file__.split('/')[-1][0:-3]
FROM_DISK_0=int(sys.argv[1]) if len(sys.argv)>1 else 1

NUM_NETS=6
ops=op.get()
NUM_RUNS=len(ops) #A run for each perturbation
num_sims=NUM_NETS*NUM_RUNS

dc=my_socket.determine_computer
CORES=40*2 if dc()=='milner' else 4
JOB_ADMIN=config.Ja_milner if dc()=='milner' else config.Ja_else
LOCAL_NUM_THREADS= 20 if dc()=='milner' else 1
WRAPPER_PROCESS=config.Wp_milner if dc()=='milner' else config.Wp_else

kwargs={
        'Builder':Builder,
        
        'cores':CORES,
        
        'file_name':FILE_NAME,
import sys
import scripts_inhibition.base_oscillation_sw as module
import eNeuro_fig_01_and_02_pert as op
import pprint
pp=pprint.pprint

path_rate_runs=get_path_rate_runs('eNeuro_fig_01_and_02_sim_inh/')
FILE_NAME=__file__.split('/')[-1][0:-3]
FROM_DISK_0=int(sys.argv[1]) if len(sys.argv)>1 else 0
LOAD_MILNER_ON_SUPERMICRO=False

NUM_NETS=2

amp_base=[fd.amp_sw] #numpy.arange(1.05, 1.2, 0.05)
freqs=[ fd.freq_sw ] #numpy.arange(0.5, .8, 0.2)
ops=[op.get()[fd.idx_sw]]
n=len(amp_base)
m=len(freqs)
amp_base=list(numpy.array([m*[v] for v in amp_base]).ravel()) 
freqs=list(freqs)*n
STN_amp_mod=[fd.STN_amp_mod_sw]#range(1, 6, 2)
num_runs=len(freqs)*len(STN_amp_mod)*len(ops)
num_sims=NUM_NETS*num_runs

dc=my_socket.determine_computer
CORES=40*4 if dc()=='milner' else 10
JOB_ADMIN=config.Ja_milner if dc()=='milner' else config.Ja_else
LOCAL_NUM_THREADS= 40 if dc()=='milner' else 10
WRAPPER_PROCESS=config.Wp_milner if dc()=='milner' else config.Wp_else

kwargs={