def install_step(self):
"Install NVIDIA libs simply by copying files. We can't user the installer because it requires root privileges."
# list of libs
libs = expand_glob_paths([os.path.join(self.libsdir, 'lib*.so*')])
libs += expand_glob_paths([os.path.join(self.libsdir, '*.la')])
libs += [os.path.join(self.libsdir, 'nvidia_drv.so')]
# list of binaries
binaries = ['nvidia-bug-report.sh',
'nvidia-cuda-mps-control',
'nvidia-cuda-mps-server',
'nvidia-debugdump',
'nvidia-settings',
'nvidia-smi',
'nvidia-xconfig']
binaries = [os.path.join(self.libsdir, x) for x in binaries]
# list of manpages
manpages = ['nvidia-settings.1.gz',
'nvidia-cuda-mps-control.1.gz',
'nvidia-xconfig.1.gz',
'nvidia-smi.1.gz']
manpages = [os.path.join(self.libsdir, x) for x in manpages]
copy(libs, os.path.join(self.installdir, 'lib64'))
copy(binaries, os.path.join(self.installdir, 'bin'))
copy(manpages, os.path.join(self.installdir, 'man', 'man1'))
def test_expand_glob_paths(self):
"""Test expand_glob_paths function."""
for dirname in ['empty_dir', 'test_dir']:
ft.mkdir(os.path.join(self.test_prefix, dirname), parents=True)
for filename in [
'file1.txt', 'test_dir/file2.txt', 'test_dir/file3.txt',
'test_dir2/file4.dat'
]:
ft.write_file(os.path.join(self.test_prefix, filename),
'gibberish')
globs = [
os.path.join(self.test_prefix, '*.txt'),
os.path.join(self.test_prefix, '*', '*')
]
expected = [
os.path.join(self.test_prefix, 'file1.txt'),
os.path.join(self.test_prefix, 'test_dir', 'file2.txt'),
os.path.join(self.test_prefix, 'test_dir', 'file3.txt'),
os.path.join(self.test_prefix, 'test_dir2', 'file4.dat'),
]
self.assertEqual(sorted(ft.expand_glob_paths(globs)), sorted(expected))
# passing non-glob patterns is fine too
file2 = os.path.join(self.test_prefix, 'test_dir', 'file2.txt')
self.assertEqual(ft.expand_glob_paths([file2]), [file2])
# test expanding of '~' into $HOME value
# hard overwrite $HOME in environment (used by os.path.expanduser) so we can reliably test this
new_home = os.path.join(self.test_prefix, 'home')
ft.mkdir(new_home, parents=True)
ft.write_file(os.path.join(new_home, 'test.txt'), 'test')
os.environ['HOME'] = new_home
self.assertEqual(ft.expand_glob_paths(['~/*.txt']),
[os.path.join(new_home, 'test.txt')])
def test_expand_glob_paths(self):
"""Test expand_glob_paths function."""
for dirname in ['empty_dir', 'test_dir']:
ft.mkdir(os.path.join(self.test_prefix, dirname), parents=True)
for filename in ['file1.txt', 'test_dir/file2.txt', 'test_dir/file3.txt', 'test_dir2/file4.dat']:
ft.write_file(os.path.join(self.test_prefix, filename), 'gibberish')
globs = [os.path.join(self.test_prefix, '*.txt'), os.path.join(self.test_prefix, '*', '*')]
expected = [
os.path.join(self.test_prefix, 'file1.txt'),
os.path.join(self.test_prefix, 'test_dir', 'file2.txt'),
os.path.join(self.test_prefix, 'test_dir', 'file3.txt'),
os.path.join(self.test_prefix, 'test_dir2', 'file4.dat'),
]
self.assertEqual(sorted(ft.expand_glob_paths(globs)), sorted(expected))
# passing non-glob patterns is fine too
file2 = os.path.join(self.test_prefix, 'test_dir', 'file2.txt')
self.assertEqual(ft.expand_glob_paths([file2]), [file2])
# test expanding of '~' into $HOME value
# hard overwrite $HOME in environment (used by os.path.expanduser) so we can reliably test this
new_home = os.path.join(self.test_prefix, 'home')
ft.mkdir(new_home, parents=True)
ft.write_file(os.path.join(new_home, 'test.txt'), 'test')
os.environ['HOME'] = new_home
self.assertEqual(ft.expand_glob_paths(['~/*.txt']), [os.path.join(new_home, 'test.txt')])
# check behaviour if glob that has no (file) matches is passed
glob_pat = os.path.join(self.test_prefix, 'test_*')
self.assertErrorRegex(EasyBuildError, "No files found using glob pattern", ft.expand_glob_paths, [glob_pat])
def install_step(self):
"""Symlink target OpenSSL installation"""
if all(self.system_ssl[key] for key in ('bin', 'engines', 'include', 'libs')):
# note: symlink to individual files, not directories,
# since directory symlinks get resolved easily...
# link OpenSSL libraries in system
lib64_dir = os.path.join(self.installdir, 'lib64')
lib64_engines_dir = os.path.join(lib64_dir, os.path.basename(self.system_ssl['engines']))
mkdir(lib64_engines_dir, parents=True)
# link existing known libraries
for libso in self.system_ssl['libs']:
symlink(libso, os.path.join(lib64_dir, os.path.basename(libso)))
# link engines library files
engine_lib_pattern = [os.path.join(self.system_ssl['engines'], '*')]
for engine_lib in expand_glob_paths(engine_lib_pattern):
symlink(engine_lib, os.path.join(lib64_engines_dir, os.path.basename(engine_lib)))
# relative symlink for unversioned libraries
cwd = change_dir(lib64_dir)
for libso in self.system_ssl['libs']:
libso = os.path.basename(libso)
unversioned_lib = '%s.%s' % (libso.split('.')[0], get_shared_lib_ext())
symlink(libso, unversioned_lib, use_abspath_source=False)
change_dir(cwd)
# link OpenSSL headers in system
include_dir = os.path.join(self.installdir, 'include', self.name.lower())
mkdir(include_dir, parents=True)
include_pattern = [os.path.join(self.system_ssl['include'], '*')]
for header_file in expand_glob_paths(include_pattern):
symlink(header_file, os.path.join(include_dir, os.path.basename(header_file)))
# link OpenSSL binary in system
bin_dir = os.path.join(self.installdir, 'bin')
mkdir(bin_dir)
symlink(self.system_ssl['bin'], os.path.join(bin_dir, self.name.lower()))
# install pkg-config files
self.install_pc_files()
elif self.cfg.get('wrap_system_openssl'):
# install OpenSSL component due to lack of OpenSSL in host system
print_warning("Not all OpenSSL components found in host system, falling back to OpenSSL in EasyBuild!")
super(EB_OpenSSL_wrapper, self).install_step()
else:
# install OpenSSL component by user request
warn_msg = "Installing OpenSSL from source in EasyBuild by user request ('wrap_system_openssl=%s')"
print_warning(warn_msg, self.cfg.get('wrap_system_openssl'))
super(EB_OpenSSL_wrapper, self).install_step()
def include_module_naming_schemes(tmpdir, paths):
"""Include module naming schemes at specified locations."""
mns_path = os.path.join(tmpdir, 'included-module-naming-schemes')
set_up_eb_package(mns_path, 'easybuild.tools.module_naming_scheme')
mns_dir = os.path.join(mns_path, 'easybuild', 'tools', 'module_naming_scheme')
allpaths = [p for p in expand_glob_paths(paths) if os.path.basename(p) != '__init__.py']
for mns_module in allpaths:
filename = os.path.basename(mns_module)
target_path = os.path.join(mns_dir, filename)
symlink(mns_module, target_path)
included_mns = [x for x in os.listdir(mns_dir) if x not in ['__init__.py']]
_log.debug("Included module naming schemes: %s", included_mns)
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, mns_path)
# hard inject location to included module naming schemes into Python search path
# only prepending to sys.path is not enough due to 'declare_namespace' in module_naming_scheme/__init__.py
new_path = os.path.join(mns_path, 'easybuild', 'tools', 'module_naming_scheme')
easybuild.tools.module_naming_scheme.__path__.insert(0, new_path)
# sanity check: verify that included module naming schemes can be imported (from expected location)
verify_imports([os.path.splitext(mns)[0] for mns in included_mns], 'easybuild.tools.module_naming_scheme', mns_dir)
return mns_path
def include_easyblocks(tmpdir, paths):
"""Include generic and software-specific easyblocks found in specified locations."""
easyblocks_path = os.path.join(tmpdir, 'included-easyblocks')
set_up_eb_package(easyblocks_path,
'easybuild.easyblocks',
subpkgs=['generic'],
pkg_init_body=EASYBLOCKS_PKG_INIT_BODY)
easyblocks_dir = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
allpaths = [
p for p in expand_glob_paths(paths)
if os.path.basename(p) != '__init__.py'
]
for easyblock_module in allpaths:
filename = os.path.basename(easyblock_module)
# generic easyblocks are expected to be in a directory named 'generic'
parent_dir = os.path.basename(os.path.dirname(easyblock_module))
if parent_dir == 'generic':
target_path = os.path.join(easyblocks_dir, 'generic', filename)
else:
target_path = os.path.join(easyblocks_dir, filename)
if not os.path.exists(target_path):
symlink(easyblock_module, target_path)
included_ebs = [
x for x in os.listdir(easyblocks_dir)
if x not in ['__init__.py', 'generic']
]
included_generic_ebs = [
x for x in os.listdir(os.path.join(easyblocks_dir, 'generic'))
if x != '__init__.py'
]
_log.debug("Included generic easyblocks: %s", included_generic_ebs)
_log.debug("Included software-specific easyblocks: %s", included_ebs)
# prepend new location to Python search path
sys.path.insert(0, easyblocks_path)
# make sure easybuild.easyblocks(.generic)
import easybuild.easyblocks
import easybuild.easyblocks.generic
# hard inject location to included (generic) easyblocks into Python search path
# only prepending to sys.path is not enough due to 'declare_namespace' in easybuild/easyblocks/__init__.py
new_path = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
easybuild.easyblocks.__path__.insert(0, new_path)
new_path = os.path.join(new_path, 'generic')
easybuild.easyblocks.generic.__path__.insert(0, new_path)
# sanity check: verify that included easyblocks can be imported (from expected location)
for subdir, ebs in [('', included_ebs), ('generic', included_generic_ebs)]:
pkg = '.'.join(['easybuild', 'easyblocks', subdir]).strip('.')
loc = os.path.join(easyblocks_dir, subdir)
verify_imports([os.path.splitext(eb)[0] for eb in ebs], pkg, loc)
return easyblocks_path
def post_install_step(self):
"""
Create wrappers for the specified host compilers, generate the appropriate stub symlinks,
and create version independent pkgconfig files
"""
def create_wrapper(wrapper_name, wrapper_comp):
"""Create for a particular compiler, with a particular name"""
wrapper_f = os.path.join(self.installdir, 'bin', wrapper_name)
write_file(wrapper_f, WRAPPER_TEMPLATE % wrapper_comp)
perms = stat.S_IXUSR | stat.S_IRUSR | stat.S_IXGRP | stat.S_IRGRP | stat.S_IXOTH | stat.S_IROTH
adjust_permissions(wrapper_f, perms)
# Prepare wrappers to handle a default host compiler other than g++
for comp in (self.cfg['host_compilers'] or []):
create_wrapper('nvcc_%s' % comp, comp)
ldconfig = which('ldconfig', log_ok=False, on_error=IGNORE)
sbin_dirs = ['/sbin', '/usr/sbin']
if not ldconfig:
# ldconfig is usually in /sbin or /usr/sbin
for cand_path in sbin_dirs:
if os.path.exists(os.path.join(cand_path, 'ldconfig')):
ldconfig = os.path.join(cand_path, 'ldconfig')
break
# fail if we couldn't find ldconfig, because it's really needed
if ldconfig:
self.log.info("ldconfig found at %s", ldconfig)
else:
path = os.environ.get('PATH', '')
raise EasyBuildError("Unable to find 'ldconfig' in $PATH (%s), nor in any of %s", path, sbin_dirs)
stubs_dir = os.path.join(self.installdir, 'lib64', 'stubs')
# Run ldconfig to create missing symlinks in the stubs directory (libcuda.so.1, etc)
cmd = ' '.join([ldconfig, '-N', stubs_dir])
run_cmd(cmd)
# GCC searches paths in LIBRARY_PATH and the system paths suffixed with ../lib64 or ../lib first
# This means stubs/../lib64 is searched before the system /lib64 folder containing a potentially older libcuda.
# See e.g. https://github.com/easybuilders/easybuild-easyconfigs/issues/12348
# Workaround: Create a copy that matches this pattern
new_stubs_dir = os.path.join(self.installdir, 'stubs')
copy_dir(stubs_dir, os.path.join(new_stubs_dir, 'lib64'))
# Also create the lib dir as a symlink
symlink('lib64', os.path.join(new_stubs_dir, 'lib'), use_abspath_source=False)
# Packages like xpra look for version independent pc files.
# See e.g. https://github.com/Xpra-org/xpra/blob/master/setup.py#L206
# Distros provide these files, so let's do it here too
pkgconfig_dir = os.path.join(self.installdir, 'pkgconfig')
if os.path.exists(pkgconfig_dir):
pc_files = expand_glob_paths([os.path.join(pkgconfig_dir, '*.pc')])
cwd = change_dir(pkgconfig_dir)
for pc_file in pc_files:
pc_file = os.path.basename(pc_file)
link = re.sub('-[0-9]*.?[0-9]*(.[0-9]*)?.pc', '.pc', pc_file)
symlink(pc_file, link, use_abspath_source=False)
change_dir(cwd)
super(EB_CUDA, self).post_install_step()
def include_module_naming_schemes(tmpdir, paths):
"""Include module naming schemes at specified locations."""
mns_path = os.path.join(tmpdir, 'included-module-naming-schemes')
set_up_eb_package(mns_path, 'easybuild.tools.module_naming_scheme')
mns_dir = os.path.join(mns_path, 'easybuild', 'tools',
'module_naming_scheme')
allpaths = [
p for p in expand_glob_paths(paths)
if os.path.basename(p) != '__init__.py'
]
for mns_module in allpaths:
filename = os.path.basename(mns_module)
target_path = os.path.join(mns_dir, filename)
symlink(mns_module, target_path)
included_mns = [x for x in os.listdir(mns_dir) if x not in ['__init__.py']]
_log.debug("Included module naming schemes: %s", included_mns)
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, mns_path)
# hard inject location to included module naming schemes into Python search path
# only prepending to sys.path is not enough due to 'declare_namespace' in module_naming_scheme/__init__.py
new_path = os.path.join(mns_path, 'easybuild', 'tools',
'module_naming_scheme')
easybuild.tools.module_naming_scheme.__path__.insert(0, new_path)
# sanity check: verify that included module naming schemes can be imported (from expected location)
verify_imports([os.path.splitext(mns)[0] for mns in included_mns],
'easybuild.tools.module_naming_scheme', mns_dir)
return mns_path
def install_step(self):
"""Custom install procedure for Siesta: copy binaries."""
bindir = os.path.join(self.installdir, 'bin')
copy_dir(os.path.join(self.cfg['start_dir'], 'bin'), bindir)
if self.cfg['with_libsiesta']:
libd = os.path.join(self.installdir, 'lib')
pkgconfd = os.path.join(libd, 'pkgconfig')
incdir = os.path.join(self.installdir, "include", "Siesta")
moddir = os.path.join(incdir, 'modules')
# Library
copy_file(os.path.join(self.obj_dir, 'libsiesta.a'),
os.path.join(libd, 'libsiesta.a'))
# Modules
mkdir(moddir, parents=True)
modules = expand_glob_paths([os.path.join(self.obj_dir, '*.mod')])
for module in modules:
copy_file(module, os.path.join(moddir,
os.path.basename(module)))
# Pkgconf file
mkdir(pkgconfd)
write_file(
os.path.join(pkgconfd, "Siesta.pc"),
PKGCONF_TEXT.format(
prefix=self.installdir,
version=self.version,
libnames=" ".join(self.pkg_conf_requires),
))
def include_toolchains(tmpdir, paths):
"""Include toolchains and toolchain components at specified locations."""
toolchains_path = os.path.join(tmpdir, 'included-toolchains')
toolchain_subpkgs = ['compiler', 'fft', 'linalg', 'mpi']
set_up_eb_package(toolchains_path,
'easybuild.toolchains',
subpkgs=toolchain_subpkgs)
tcs_dir = os.path.join(toolchains_path, 'easybuild', 'toolchains')
allpaths = expand_glob_paths(paths)
for toolchain_module in allpaths:
filename = os.path.basename(toolchain_module)
parent_dir = os.path.basename(os.path.dirname(toolchain_module))
# toolchain components are expected to be in a directory named according to the type of component
if parent_dir in toolchain_subpkgs:
target_path = os.path.join(tcs_dir, parent_dir, filename)
else:
target_path = os.path.join(tcs_dir, filename)
symlink(toolchain_module, target_path)
included_toolchains = [
x for x in os.listdir(tcs_dir)
if x not in ['__init__.py'] + toolchain_subpkgs
]
_log.debug("Included toolchains: %s", included_toolchains)
included_subpkg_modules = {}
for subpkg in toolchain_subpkgs:
included_subpkg_modules[subpkg] = [
x for x in os.listdir(os.path.join(tcs_dir, subpkg))
if x != '__init__.py'
]
_log.debug("Included toolchain %s components: %s", subpkg,
included_subpkg_modules[subpkg])
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, toolchains_path)
reload(easybuild.toolchains)
for subpkg in toolchain_subpkgs:
reload(sys.modules['easybuild.toolchains.%s' % subpkg])
# sanity check: verify that included toolchain modules can be imported (from expected location)
verify_imports([os.path.splitext(mns)[0] for mns in included_toolchains],
'easybuild.toolchains', tcs_dir)
for subpkg in toolchain_subpkgs:
pkg = '.'.join(['easybuild', 'toolchains', subpkg])
loc = os.path.join(tcs_dir, subpkg)
verify_imports([
os.path.splitext(tcmod)[0]
for tcmod in included_subpkg_modules[subpkg]
], pkg, loc)
return toolchains_path
def include_toolchains(tmpdir, paths):
"""Include toolchains and toolchain components at specified locations."""
toolchains_path = os.path.join(tmpdir, 'included-toolchains')
toolchain_subpkgs = ['compiler', 'fft', 'linalg', 'mpi']
set_up_eb_package(toolchains_path, 'easybuild.toolchains', subpkgs=toolchain_subpkgs)
tcs_dir = os.path.join(toolchains_path, 'easybuild', 'toolchains')
allpaths = [p for p in expand_glob_paths(paths) if os.path.basename(p) != '__init__.py']
for toolchain_module in allpaths:
filename = os.path.basename(toolchain_module)
parent_dir = os.path.basename(os.path.dirname(toolchain_module))
# toolchain components are expected to be in a directory named according to the type of component
if parent_dir in toolchain_subpkgs:
target_path = os.path.join(tcs_dir, parent_dir, filename)
else:
target_path = os.path.join(tcs_dir, filename)
if not os.path.exists(target_path):
symlink(toolchain_module, target_path)
included_toolchains = [x for x in os.listdir(tcs_dir) if x not in ['__init__.py'] + toolchain_subpkgs]
_log.debug("Included toolchains: %s", included_toolchains)
included_subpkg_modules = {}
for subpkg in toolchain_subpkgs:
included_subpkg_modules[subpkg] = [x for x in os.listdir(os.path.join(tcs_dir, subpkg)) if x != '__init__.py']
_log.debug("Included toolchain %s components: %s", subpkg, included_subpkg_modules[subpkg])
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, toolchains_path)
# reload toolchain modules and hard inject location to included toolchains into Python search path
# only prepending to sys.path is not enough due to 'declare_namespace' in toolchains/*/__init__.py
easybuild.toolchains.__path__.insert(0, os.path.join(toolchains_path, 'easybuild', 'toolchains'))
for subpkg in toolchain_subpkgs:
tcpkg = 'easybuild.toolchains.%s' % subpkg
sys.modules[tcpkg].__path__.insert(0, os.path.join(toolchains_path, 'easybuild', 'toolchains', subpkg))
# sanity check: verify that included toolchain modules can be imported (from expected location)
verify_imports([os.path.splitext(mns)[0] for mns in included_toolchains], 'easybuild.toolchains', tcs_dir)
for subpkg in toolchain_subpkgs:
pkg = '.'.join(['easybuild', 'toolchains', subpkg])
loc = os.path.join(tcs_dir, subpkg)
verify_imports([os.path.splitext(tcmod)[0] for tcmod in included_subpkg_modules[subpkg]], pkg, loc)
return toolchains_path
def include_easyblocks(tmpdir, paths):
"""Include generic and software-specific easyblocks found in specified locations."""
easyblocks_path = os.path.join(tmpdir, 'included-easyblocks')
set_up_eb_package(easyblocks_path,
'easybuild.easyblocks',
subpkgs=['generic'],
pkg_init_body=EASYBLOCKS_PKG_INIT_BODY)
easyblocks_dir = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
allpaths = expand_glob_paths(paths)
for easyblock_module in allpaths:
filename = os.path.basename(easyblock_module)
# generic easyblocks are expected to be in a directory named 'generic'
parent_dir = os.path.basename(os.path.dirname(easyblock_module))
if parent_dir == 'generic':
target_path = os.path.join(easyblocks_dir, 'generic', filename)
else:
target_path = os.path.join(easyblocks_dir, filename)
symlink(easyblock_module, target_path)
included_ebs = [
x for x in os.listdir(easyblocks_dir)
if x not in ['__init__.py', 'generic']
]
included_generic_ebs = [
x for x in os.listdir(os.path.join(easyblocks_dir, 'generic'))
if x != '__init__.py'
]
_log.debug("Included generic easyblocks: %s", included_generic_ebs)
_log.debug("Included software-specific easyblocks: %s", included_ebs)
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, easyblocks_path)
reload(easybuild)
if 'easybuild.easyblocks' in sys.modules:
reload(easybuild.easyblocks)
reload(easybuild.easyblocks.generic)
# sanity check: verify that included easyblocks can be imported (from expected location)
for subdir, ebs in [('', included_ebs), ('generic', included_generic_ebs)]:
pkg = '.'.join(['easybuild', 'easyblocks', subdir]).strip('.')
loc = os.path.join(easyblocks_dir, subdir)
verify_imports([os.path.splitext(eb)[0] for eb in ebs], pkg, loc)
return easyblocks_path
def include_easyblocks(tmpdir, paths):
"""Include generic and software-specific easyblocks found in specified locations."""
easyblocks_path = os.path.join(tmpdir, 'included-easyblocks')
set_up_eb_package(easyblocks_path, 'easybuild.easyblocks',
subpkgs=['generic'], pkg_init_body=EASYBLOCKS_PKG_INIT_BODY)
easyblocks_dir = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
allpaths = [p for p in expand_glob_paths(paths) if os.path.basename(p) != '__init__.py']
for easyblock_module in allpaths:
filename = os.path.basename(easyblock_module)
# generic easyblocks are expected to be in a directory named 'generic'
parent_dir = os.path.basename(os.path.dirname(easyblock_module))
if parent_dir == 'generic':
target_path = os.path.join(easyblocks_dir, 'generic', filename)
else:
target_path = os.path.join(easyblocks_dir, filename)
symlink(easyblock_module, target_path)
included_ebs = [x for x in os.listdir(easyblocks_dir) if x not in ['__init__.py', 'generic']]
included_generic_ebs = [x for x in os.listdir(os.path.join(easyblocks_dir, 'generic')) if x != '__init__.py']
_log.debug("Included generic easyblocks: %s", included_generic_ebs)
_log.debug("Included software-specific easyblocks: %s", included_ebs)
# prepend new location to Python search path
sys.path.insert(0, easyblocks_path)
# make sure easybuild.easyblocks(.generic)
import easybuild.easyblocks
import easybuild.easyblocks.generic
# hard inject location to included (generic) easyblocks into Python search path
# only prepending to sys.path is not enough due to 'declare_namespace' in easybuild/easyblocks/__init__.py
new_path = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
easybuild.easyblocks.__path__.insert(0, new_path)
new_path = os.path.join(new_path, 'generic')
easybuild.easyblocks.generic.__path__.insert(0, new_path)
# sanity check: verify that included easyblocks can be imported (from expected location)
for subdir, ebs in [('', included_ebs), ('generic', included_generic_ebs)]:
pkg = '.'.join(['easybuild', 'easyblocks', subdir]).strip('.')
loc = os.path.join(easyblocks_dir, subdir)
verify_imports([os.path.splitext(eb)[0] for eb in ebs], pkg, loc)
return easyblocks_path
def include_easyblocks(tmpdir, paths):
"""Include generic and software-specific easyblocks found in specified locations."""
easyblocks_path = os.path.join(tmpdir, 'included-easyblocks')
set_up_eb_package(easyblocks_path, 'easybuild.easyblocks',
subpkgs=['generic'], pkg_init_body=EASYBLOCKS_PKG_INIT_BODY)
easyblocks_dir = os.path.join(easyblocks_path, 'easybuild', 'easyblocks')
allpaths = expand_glob_paths(paths)
for easyblock_module in allpaths:
filename = os.path.basename(easyblock_module)
# generic easyblocks are expected to be in a directory named 'generic'
parent_dir = os.path.basename(os.path.dirname(easyblock_module))
if parent_dir == 'generic':
target_path = os.path.join(easyblocks_dir, 'generic', filename)
else:
target_path = os.path.join(easyblocks_dir, filename)
symlink(easyblock_module, target_path)
included_ebs = [x for x in os.listdir(easyblocks_dir) if x not in ['__init__.py', 'generic']]
included_generic_ebs = [x for x in os.listdir(os.path.join(easyblocks_dir, 'generic')) if x != '__init__.py']
_log.debug("Included generic easyblocks: %s", included_generic_ebs)
_log.debug("Included software-specific easyblocks: %s", included_ebs)
# inject path into Python search path, and reload modules to get it 'registered' in sys.modules
sys.path.insert(0, easyblocks_path)
reload(easybuild)
if 'easybuild.easyblocks' in sys.modules:
reload(easybuild.easyblocks)
reload(easybuild.easyblocks.generic)
# sanity check: verify that included easyblocks can be imported (from expected location)
for subdir, ebs in [('', included_ebs), ('generic', included_generic_ebs)]:
pkg = '.'.join(['easybuild', 'easyblocks', subdir]).strip('.')
loc = os.path.join(easyblocks_dir, subdir)
verify_imports([os.path.splitext(eb)[0] for eb in ebs], pkg, loc)
return easyblocks_path
def install_step(self):
"""Symlink target OpenSSL installation"""
if all(self.system_ssl[key]
for key in ('bin', 'engines', 'include', 'lib')):
# note: symlink to individual files, not directories,
# since directory symlinks get resolved easily...
# link OpenSSL libraries in system
lib64_dir = os.path.join(self.installdir, 'lib64')
lib64_engines_dir = os.path.join(
lib64_dir, os.path.basename(self.system_ssl['engines']))
mkdir(lib64_engines_dir, parents=True)
# link existing known libraries
ssl_syslibdir = os.path.dirname(self.system_ssl['lib'])
lib_files = [
os.path.join(ssl_syslibdir, x) for x in self.target_ssl_libs
]
for libso in lib_files:
symlink(libso, os.path.join(lib64_dir,
os.path.basename(libso)))
# link engines library files
engine_lib_pattern = [
os.path.join(self.system_ssl['engines'], '*')
]
for engine_lib in expand_glob_paths(engine_lib_pattern):
symlink(
engine_lib,
os.path.join(lib64_engines_dir,
os.path.basename(engine_lib)))
# relative symlink for unversioned libraries
cwd = change_dir(lib64_dir)
for libso in self.target_ssl_libs:
unversioned_lib = '%s.%s' % (libso.split('.')[0],
get_shared_lib_ext())
symlink(libso, unversioned_lib, use_abspath_source=False)
change_dir(cwd)
# link OpenSSL headers in system
include_dir = os.path.join(self.installdir, 'include',
self.name.lower())
mkdir(include_dir, parents=True)
include_pattern = [os.path.join(self.system_ssl['include'], '*')]
for header_file in expand_glob_paths(include_pattern):
symlink(
header_file,
os.path.join(include_dir, os.path.basename(header_file)))
# link OpenSSL binary in system
bin_dir = os.path.join(self.installdir, 'bin')
mkdir(bin_dir)
symlink(self.system_ssl['bin'],
os.path.join(bin_dir, self.name.lower()))
else:
# install OpenSSL component
print_warning(
"Not all OpenSSL components found, falling back to OpenSSL in EasyBuild!"
)
super(EB_OpenSSL_wrapper, self).install_step()