def test_after_schedule_change2(self):
     subject_visit = SubjectVisit.objects.create(
         appointment=self.appointment, reason=SCHEDULED)
     self.assertEqual(CrfMetadata.objects.all().count(), 5)
     crfs = FormsCollection(
         Crf(show_order=1, model="edc_metadata.crfone", required=True),
         Crf(show_order=2, model="edc_metadata.crftwo", required=True),
         Crf(show_order=3, model="edc_metadata.crfthree", required=True),
         Crf(show_order=4, model="edc_metadata.crffour", required=True),
     )
     self.register_new_visit_schedule(crfs)
     self.assertEqual(CrfMetadata.objects.all().count(), 5)
     metadata_refresher = MetadataRefresher()
     metadata_refresher.run()
     self.assertEqual(CrfMetadata.objects.all().count(), 4)
     expected = {
         "edc_metadata.crfone": REQUIRED,
         "edc_metadata.crftwo": REQUIRED,
         "edc_metadata.crfthree": REQUIRED,
         "edc_metadata.crfFour": REQUIRED,
     }
     self.check(expected, subject_visit=subject_visit)
Exemplo n.º 2
0
    def setUp(self):
        load_list_data(
            list_data=list_data,
            model_name="edc_visit_tracking.subjectvisitmissedreasons",
        )
        self.subject_identifier = "12345"
        self.helper = self.helper_cls(
            subject_identifier=self.subject_identifier)
        crfs = FormsCollection(
            Crf(show_order=1, model="edc_metadata.crfone", required=True),
            Crf(show_order=2, model="edc_metadata.crftwo", required=True),
            Crf(show_order=3, model="edc_metadata.crfthree", required=True),
            Crf(show_order=4, model="edc_metadata.crffour", required=True),
            Crf(show_order=5, model="edc_metadata.crffive", required=True),
        )
        crfs_missed = FormsCollection(
            Crf(
                show_order=1,
                model="edc_visit_tracking.subjectvisitmissed",
                required=True,
            ), )

        visit_schedule1 = VisitSchedule(
            name="visit_schedule1",
            offstudy_model="edc_visit_tracking.subjectoffstudy",
            death_report_model="edc_visit_tracking.deathreport",
            locator_model="edc_locator.subjectlocator",
        )
        schedule1 = Schedule(
            name="schedule1",
            onschedule_model="edc_visit_tracking.onscheduleone",
            offschedule_model="edc_visit_tracking.offscheduleone",
            consent_model="edc_visit_tracking.subjectconsent",
            appointment_model="edc_appointment.appointment",
        )
        visits = []
        for index in range(0, 4):
            visits.append(
                Visit(
                    code=f"{index + 1}000",
                    title=f"Day {index + 1}",
                    timepoint=index,
                    rbase=relativedelta(days=index),
                    rlower=relativedelta(days=0),
                    rupper=relativedelta(days=6),
                    requisitions=[],
                    crfs=crfs,
                    crfs_missed=crfs_missed,
                    allow_unscheduled=True,
                ))
        for visit in visits:
            schedule1.add_visit(visit)
        visit_schedule1.add_schedule(schedule1)
        site_visit_schedules._registry = {}
        site_visit_schedules.register(visit_schedule=visit_schedule1)
        site_reference_configs.register_from_visit_schedule(visit_models={
            "edc_appointment.appointment":
            "edc_visit_tracking.subjectvisit"
        })
Exemplo n.º 3
0
from edc_visit_schedule import Crf, FormsCollection

crfs_prn = FormsCollection(
    Crf(show_order=212, model="mocca_subject.bloodresultslipid"),
    Crf(show_order=214, model="mocca_subject.cd4result"),
    Crf(show_order=215, model="mocca_subject.glucosefollowup"),
    Crf(show_order=216, model="mocca_subject.viralloadresult"),
    name="prn",
)

all_crfs = [
    Crf(show_order=110, model="mocca_subject.clinicalreview"),
    Crf(show_order=111, model="mocca_subject.indicators"),
    Crf(show_order=112, model="mocca_subject.hivinitialreview",
        required=False),
    Crf(show_order=114, model="mocca_subject.dminitialreview", required=False),
    Crf(show_order=116, model="mocca_subject.htninitialreview",
        required=False),
    Crf(show_order=118,
        model="mocca_subject.cholinitialreview",
        required=False),
    Crf(show_order=120, model="mocca_subject.hivreview", required=False),
    Crf(show_order=130, model="mocca_subject.dmreview", required=False),
    Crf(show_order=140, model="mocca_subject.htnreview", required=False),
    Crf(show_order=142, model="mocca_subject.cholreview", required=False),
    Crf(show_order=145, model="mocca_subject.medications"),
    Crf(show_order=150, model="mocca_subject.drugrefillhtn", required=False),
    Crf(show_order=160, model="mocca_subject.drugrefilldm", required=False),
    Crf(show_order=170, model="mocca_subject.drugrefillhiv", required=False),
    Crf(show_order=175, model="mocca_subject.drugrefillchol", required=False),
    Crf(show_order=185,
Exemplo n.º 4
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

crfs = FormsCollection(
    Crf(show_order=1, model="edc_fieldsets.mymodel", required=True),
    Crf(show_order=2, model="edc_fieldsets.mymodel2", required=True),
    Crf(show_order=3, model="edc_fieldsets.mymodel3", required=True),
)


visit0 = Visit(
    code="1000",
    title="Day 1",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    facility_name="default",
)

visit1 = Visit(
    code="2000",
    title="Day 2",
    timepoint=1,
    rbase=relativedelta(days=1),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    facility_name="default",
)
Exemplo n.º 5
0
from edc_visit_schedule import Crf, FormsCollection

crfs_prn = FormsCollection(
    Crf(show_order=178, model="inte_subject.familyhistory"),
    Crf(show_order=180, model="inte_subject.nextappointment"),
    Crf(show_order=200, model="inte_subject.cd4result"),
    Crf(show_order=210, model="inte_subject.glucose"),
    Crf(show_order=220, model="inte_subject.viralloadresult"),
    name="prn",
)

crfs_unscheduled = FormsCollection(
    Crf(show_order=110, model="inte_subject.clinicalreview"),
    Crf(show_order=111, model="inte_subject.indicators"),
    Crf(show_order=112, model="inte_subject.hivinitialreview", required=False),
    Crf(show_order=114, model="inte_subject.dminitialreview", required=False),
    Crf(show_order=116, model="inte_subject.htninitialreview", required=False),
    Crf(show_order=120, model="inte_subject.hivreview", required=False),
    Crf(show_order=130, model="inte_subject.dmreview", required=False),
    Crf(show_order=140, model="inte_subject.htnreview", required=False),
    Crf(show_order=145, model="inte_subject.medications"),
    Crf(show_order=150, model="inte_subject.drugrefillhtn", required=False),
    Crf(show_order=160, model="inte_subject.drugrefilldm", required=False),
    Crf(show_order=170, model="inte_subject.drugrefillhiv", required=False),
    Crf(show_order=185,
        model="inte_subject.hivmedicationadherence",
        required=False),
    Crf(show_order=190,
        model="inte_subject.dmmedicationadherence",
        required=False),
    Crf(show_order=195,
Exemplo n.º 6
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=120, model="inte_subject.hivinitialreview"),
    Crf(show_order=130, model="inte_subject.diabetesinitialreview"),
    Crf(show_order=140, model="inte_subject.hypertensioninitialreview"),
    name="prn",
)
#
# crfs_unscheduled = FormsCollection(
#     Crf(show_order=10, model="inte_subject.bloodresultsglu"),
#     Crf(show_order=20, model="inte_subject.bloodresultsfbc"),
#     Crf(show_order=25, model="inte_subject.bloodresultslipid"),
#     Crf(show_order=30, model="inte_subject.bloodresultslft"),
#     Crf(show_order=40, model="inte_subject.bloodresultsrft"),
#     Crf(show_order=50, model="inte_subject.malariatest"),
#     Crf(show_order=60, model="inte_subject.urinedipsticktest"),
#     name="unscheduled",
# )

crfs_d1 = FormsCollection(
    Crf(show_order=100, model="inte_subject.baselinecarestatus"),
    Crf(show_order=110, model="inte_subject.anthropometry"),
    Crf(show_order=120, model="inte_subject.hivinitialreview"),
    Crf(show_order=130, model="inte_subject.diabetesinitialreview"),
    Crf(show_order=140, model="inte_subject.hypertensioninitialreview"),
    Crf(show_order=150, model="inte_subject.physicalactivity"),
    Crf(show_order=160, model="inte_subject.riskfactors"),
    name="day1",
)
crfs_1m = FormsCollection(name="1m")
Exemplo n.º 7
0
def get_visit_schedule(i=None):

    i = i or 4

    crfs = FormsCollection(
        Crf(show_order=1, model="edc_metadata.crfone", required=True),
        Crf(show_order=2, model="edc_metadata.crftwo", required=True),
        Crf(show_order=3, model="edc_metadata.crfthree", required=True),
        Crf(show_order=4, model="edc_metadata.crffour", required=True),
        Crf(show_order=5, model="edc_metadata.crffive", required=True),
    )

    requisitions = FormsCollection(
        Requisition(show_order=10,
                    panel=Panel("one"),
                    required=True,
                    additional=False),
        Requisition(show_order=20,
                    panel=Panel("two"),
                    required=True,
                    additional=False),
        Requisition(show_order=30,
                    panel=Panel("three"),
                    required=True,
                    additional=False),
        Requisition(show_order=40,
                    panel=Panel("four"),
                    required=True,
                    additional=False),
        Requisition(show_order=50,
                    panel=Panel("five"),
                    required=True,
                    additional=False),
        Requisition(show_order=60,
                    panel=Panel("six"),
                    required=True,
                    additional=False),
    )

    visit_schedule = VisitSchedule(
        name="visit_schedule",
        offstudy_model="edc_offstudy.subjectoffstudy",
        death_report_model="edc_visit_tracking.deathreport",
        locator_model="edc_locator.subjectlocator",
    )

    schedule = Schedule(
        name="schedule",
        onschedule_model="edc_visit_tracking.onscheduleone",
        offschedule_model="edc_visit_tracking.offscheduleone",
        consent_model="edc_visit_tracking.subjectconsent",
        appointment_model="edc_appointment.appointment",
    )

    visits = []
    for index in range(0, i):
        visits.append(
            Visit(
                code=f"{index + 1}000",
                title=f"Day {index + 1}",
                timepoint=index,
                rbase=relativedelta(days=index),
                rlower=relativedelta(days=0),
                rupper=relativedelta(days=6),
                requisitions=requisitions,
                crfs=crfs,
                facility_name="default",
                allow_unscheduled=True,
            ))
    for visit in visits:
        schedule.add_visit(visit)

    visit_schedule.add_schedule(schedule)
    return visit_schedule
Exemplo n.º 8
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

crfs = FormsCollection(
    Crf(show_order=1, model="edc_timepoint.crfone", required=True),
    Crf(show_order=2, model="edc_timepoint.crftwo", required=True),
)

visit_schedule1 = VisitSchedule(
    name="visit_schedule1",
    offstudy_model="edc_offstudy.subjectoffstudy",
    death_report_model="edc_timepoint.deathreport",
    locator_model="edc_locator.subjectlocator",
)

schedule1 = Schedule(
    name="schedule1",
    onschedule_model="edc_timepoint.onschedule",
    offschedule_model="edc_timepoint.offschedule",
    appointment_model="edc_appointment.appointment",
    consent_model="edc_timepoint.subjectconsent",
)

visits = []
for index in range(0, 4):
    visits.append(
        Visit(
            code=f"{index + 1}000",
            title=f"Day {index + 1}",
            timepoint=index,
            rbase=relativedelta(days=index),
Exemplo n.º 9
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(Crf(show_order=1, model='tp_subject.demographic'),
                           Crf(show_order=2, model='tp_subject.education'),
                           Crf(show_order=3,
                               model='tp_subject.educationhoh',
                               required=False),
                           Crf(show_order=4,
                               model='tp_subject.communityengagement'),
                           name='prn')

crfs_unscheduled = FormsCollection(Crf(show_order=1,
                                       model='tp_subject.demographic'),
                                   Crf(show_order=2,
                                       model='tp_subject.communityengagement'),
                                   name='unscheduled')

crfs_d1 = FormsCollection(Crf(show_order=1, model='tp_subject.education'),
                          Crf(show_order=2,
                              model='tp_subject.educationhoh',
                              required=False),
                          Crf(show_order=3, model='tp_subject.demographic'),
                          name='day1')

crfs_d3 = FormsCollection(
    #     Crf(show_order=1, model='tp_subject.bloodresult'),
    Crf(show_order=1, model='tp_subject.education'),
    Crf(show_order=2, model='tp_subject.educationhoh', required=False),
    name='day3')

crfs_d5 = FormsCollection(
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=1, model='flourish_child.childcliniciannotes',
        required=False, additional=False),
    name='child_crf_prn')

crfs_unscheduled = FormsCollection(
    Crf(show_order=1, model='flourish_child.childcliniciannotes'),
    name='unscheduled')

child_a_crf_2000 = FormsCollection(
    Crf(show_order=1, model='flourish_child.childhivrapidtestcounseling'),
    Crf(show_order=2, model='flourish_child.childbirthscreening',
        required=False),
    Crf(show_order=3, model='flourish_child.childimmunizationhistory'),
    Crf(show_order=4, model='flourish_child.childmedicalhistory'),
    Crf(show_order=5, model='flourish_child.childsociodemographic'),
    Crf(show_order=6, model='flourish_child.childclinicalmeasurements'),
    Crf(show_order=7, model='flourish_child.infantfeeding', required=False),
    Crf(show_order=8, model='flourish_child.childfoodsecurityquestionnaire'),
    Crf(show_order=9, model='flourish_child.childcliniciannotes'),
    Crf(show_order=10, model='flourish_child.childcovid19'),
    Crf(show_order=11, model='flourish_child.childprevioushospitalization'),
    name='child_cohort_a_enrollment')

child_b_crf_2000 = FormsCollection(
    Crf(show_order=1, model='flourish_child.childhivrapidtestcounseling'),
    Crf(show_order=2, model='flourish_child.childimmunizationhistory'),
    Crf(show_order=3, model='flourish_child.childmedicalhistory'),
    Crf(show_order=4, model='flourish_child.childclinicalmeasurements'),
Exemplo n.º 11
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule
from edc_visit_schedule.tests.dummy_panel import DummyPanel
from edc_visit_schedule.visit.requisition import Requisition


class MockPanel(DummyPanel):
    """`requisition_model` is normally set when the lab profile
    is set up.
    """

    def __init__(self, name):
        super().__init__(requisition_model="edc_lab.subjectrequisition", name=name)


crfs = FormsCollection(Crf(show_order=1, model="edc_lab.crfone", required=True))

requisitions = FormsCollection(
    Requisition(show_order=10, panel=MockPanel("panel"), required=True, additional=False)
)


visit = Visit(
    code="1000",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    requisitions=requisitions,
    crfs=crfs,
    requisitions_unscheduled=None,
Exemplo n.º 12
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

crfs = FormsCollection(
    Crf(show_order=1, model=f"edc_fieldsets.mymodel", required=True))

visit0 = Visit(
    code="1000",
    title="Day 1",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    facility_name="default",
)

visit1 = Visit(
    code="2000",
    title="Day 2",
    timepoint=1,
    rbase=relativedelta(days=1),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    facility_name="default",
)

schedule = Schedule(
    name="schedule",
    onschedule_model="edc_form_label.onschedule",
Exemplo n.º 13
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=120, model="inte_subject.hivinitialreview"),
    Crf(show_order=130, model="inte_subject.diabetesinitialreview"),
    Crf(show_order=140, model="inte_subject.hypertensioninitialreview"),
    name="prn",
)
#
# crfs_unscheduled = FormsCollection(
#     Crf(show_order=10, model="inte_subject.bloodresultsglu"),
#     Crf(show_order=20, model="inte_subject.bloodresultsfbc"),
#     Crf(show_order=25, model="inte_subject.bloodresultslipid"),
#     Crf(show_order=30, model="inte_subject.bloodresultslft"),
#     Crf(show_order=40, model="inte_subject.bloodresultsrft"),
#     Crf(show_order=50, model="inte_subject.malariatest"),
#     Crf(show_order=60, model="inte_subject.urinedipsticktest"),
#     name="unscheduled",
# )

crfs_d1 = FormsCollection(
    Crf(show_order=100, model="inte_subject.generalassessmentinitial"),
    Crf(show_order=110, model="inte_subject.anthropometry"),
    Crf(show_order=120, model="inte_subject.hivinitialreview"),
    Crf(show_order=130, model="inte_subject.diabetesinitialreview"),
    Crf(show_order=140, model="inte_subject.hypertensioninitialreview"),
    Crf(show_order=150, model="inte_subject.physicalactivity"),
    Crf(show_order=160, model="inte_subject.riskfactors"),
    name="day1",
)
Exemplo n.º 14
0
from edc_visit_schedule.tests import DummyPanel

app_label = "edc_metadata"


class MockPanel(DummyPanel):
    """`requisition_model` is normally set when the lab profile
    is set up.
    """

    def __init__(self, name):
        super().__init__(requisition_model="edc_metadata.subjectrequisition", name=name)


crfs_missed = FormsCollection(
    Crf(show_order=1, model="edc_metadata.subjectvisitmissed", required=True),
)

crfs0 = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.crfone", required=True),
    Crf(show_order=2, model=f"{app_label}.crftwo", required=True),
    Crf(show_order=3, model=f"{app_label}.crfthree", required=True),
    Crf(show_order=4, model=f"{app_label}.crffour", required=True),
    Crf(show_order=5, model=f"{app_label}.crffive", required=True),
)

crfs1 = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.crffour", required=True),
    Crf(show_order=2, model=f"{app_label}.crffive", required=True),
    Crf(show_order=3, model=f"{app_label}.crfsix", required=True),
)
Exemplo n.º 15
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

app_label = "edc_pharmacy"

crfs = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.studymedication", required=True),
)

visit0 = Visit(
    code="1000",
    title="Week 1",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    allow_unscheduled=True,
    facility_name="5-day-clinic",
)

visit1 = Visit(
    code="2000",
    title="Week 2",
    timepoint=1,
    rbase=relativedelta(days=7),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    crfs=crfs,
    facility_name="5-day-clinic",
)
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=1,
        model='flourish_caregiver.cliniciannotes',
        required=False,
        additional=False),
    Crf(show_order=2,
        model='flourish_caregiver.caregiversocialworkreferral',
        required=False,
        additional=False),
    name='caregiver_crf_prn')

crfs_prn_referral = FormsCollection(Crf(
    show_order=1,
    model='flourish_caregiver.caregiversocialworkreferral',
    required=False,
    additional=False),
                                    name='caregiver_ref_crf_prn')

crf_pre_consent = FormsCollection(Crf(
    show_order=1, model='flourish_caregiver.sociodemographicdata'),
                                  name='pre_flourish')

crfs_unscheduled = FormsCollection(Crf(
    show_order=1, model='flourish_caregiver.cliniciannotes'),
                                   name='unscheduled')

a_crf_2000 = FormsCollection(
    Crf(show_order=1,
        model='flourish_caregiver.hivrapidtestcounseling',
Exemplo n.º 17
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=1, model="ambition_subject.bloodresult"),
    Crf(show_order=2, model="ambition_subject.lumbarpuncturecsf"),
    Crf(show_order=3, model="ambition_subject.microbiology"),
    Crf(show_order=4, model="ambition_subject.radiology"),
    # Crf(show_order=5, model="ambition_subject.pkpdcrf"),
    name="prn",
)

crfs_unscheduled = FormsCollection(
    Crf(show_order=1, model="ambition_subject.bloodresult"), name="unscheduled"
)


crfs_d1 = FormsCollection(
    Crf(show_order=1, model="ambition_subject.patienthistory"),
    Crf(show_order=2, model="ambition_subject.medicalexpenses"),
    Crf(show_order=3, model="ambition_subject.medicalexpensestwo", required=False),
    Crf(show_order=4, model="ambition_subject.education"),
    Crf(show_order=5, model="ambition_subject.educationhoh", required=False),
    Crf(show_order=6, model="ambition_subject.bloodresult"),
    Crf(show_order=7, model="ambition_subject.lumbarpuncturecsf"),
    Crf(show_order=10, model="ambition_subject.microbiology", required=False),
    Crf(show_order=11, model="ambition_subject.radiology", required=False),
    name="day1",
)

crfs_d3 = FormsCollection(
    Crf(show_order=1, model="ambition_subject.bloodresult"), name="day3"
Exemplo n.º 18
0
    is set up.
    """
    def __init__(self, name):
        super().__init__(
            requisition_model="edc_appointment.subjectrequisition", name=name)


panel_one = MockPanel(name="one")
panel_two = MockPanel(name="two")
panel_three = MockPanel(name="three")
panel_four = MockPanel(name="four")
panel_five = MockPanel(name="five")
panel_six = MockPanel(name="six")

crfs = FormsCollection(
    Crf(show_order=1, model="edc_metadata.crfone", required=True),
    Crf(show_order=2, model="edc_metadata.crftwo", required=True),
    Crf(show_order=3, model="edc_metadata.crfthree", required=True),
    Crf(show_order=4, model="edc_metadata.crffour", required=True),
    Crf(show_order=5, model="edc_metadata.crffive", required=True),
)

crfs_missed = FormsCollection(
    Crf(show_order=10, model="edc_metadata.subjectvisitmissed"),
    name="missed",
)

requisitions = FormsCollection(
    Requisition(show_order=10,
                panel=panel_one,
                required=True,
Exemplo n.º 19
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=10, model="meta_subject.bloodresultsfbc"),
    Crf(show_order=20, model="meta_subject.bloodresultsglu"),
    Crf(show_order=30, model="meta_subject.bloodresultshba1c"),
    Crf(show_order=35, model="meta_subject.bloodresultslipid"),
    Crf(show_order=40, model="meta_subject.bloodresultslft"),
    Crf(show_order=50, model="meta_subject.bloodresultsrft"),
    Crf(show_order=55, model="meta_subject.malariatest"),
    Crf(show_order=60, model="meta_subject.urinedipsticktest"),
    name="prn",
)

crfs_unscheduled = FormsCollection(
    Crf(show_order=10, model="meta_subject.bloodresultsglu"),
    Crf(show_order=20, model="meta_subject.bloodresultsfbc"),
    Crf(show_order=25, model="meta_subject.bloodresultslipid"),
    Crf(show_order=30, model="meta_subject.bloodresultslft"),
    Crf(show_order=40, model="meta_subject.bloodresultsrft"),
    Crf(show_order=50, model="meta_subject.malariatest"),
    Crf(show_order=60, model="meta_subject.urinedipsticktest"),
    name="unscheduled",
)


crfs_d1 = FormsCollection(
    Crf(show_order=10, model="meta_subject.physicalexam"),
    Crf(show_order=15, model="meta_subject.patienthistory"),
    Crf(show_order=40, model="meta_subject.bloodresultsfbc"),
    Crf(show_order=50, model="meta_subject.bloodresultslipid"),
Exemplo n.º 20
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(Crf(show_order=2,
                               model='td_infant.infantcovidscreening',
                               required=False,
                               additional=False),
                           name='infant_crf_prn')

crf_prn_2060 = FormsCollection(Crf(show_order=2,
                                   model='td_infant.infantarvproph',
                                   required=False,
                                   additional=False),
                               name='infant_crf_prn_2060')

infant_crf_2000 = FormsCollection(
    Crf(show_order=1, model='td_infant.infantbirthdata'),
    Crf(show_order=2, model='td_infant.infantbirthexam'),
    Crf(show_order=3, model='td_infant.infantbirthfeedingvaccine'),
    Crf(show_order=4, model='td_infant.infantbirtharv'),
    Crf(show_order=5, model='td_infant.infantcongenitalanomalies'),
    Crf(show_order=7,
        model='td_infant.infantnvpdispensing',
        required=False,
        additional=True),
    Crf(show_order=8, model='td_infant.infantcliniciannotes'),
    name='Birth')

infant_crf_2010 = FormsCollection(
    Crf(show_order=1, model='td_infant.infantfu'),
    Crf(show_order=2, model='td_infant.infantfuphysical'),
    Crf(show_order=3, model='td_infant.infantfudx'),
Exemplo n.º 21
0
from edc_visit_schedule import FormsCollection, Crf

crf = {}
crfs_1000 = FormsCollection(
    Crf(show_order=2, model='trainee_subject.educationquestionnaire'),
    Crf(show_order=3, model='trainee_subject.communityquestionnaire'),
    name='enrollment')
crf.update({1000: crfs_1000})

crfs_1300 = FormsCollection(
    Crf(show_order=1, model='trainee_subject.educationquestionnaire'),
    Crf(show_order=2, model='trainee_subject.communityquestionnaire'),
    name='month3')
crf.update({1300: crfs_1300})

crfs_1600 = FormsCollection(
    Crf(show_order=1, model='trainee_subject.educationquestionnaire'),
    Crf(show_order=2, model='trainee_subject.communityquestionnaire'),
    name='month6')
crf.update({1600: crfs_1600})

crfs_1900 = FormsCollection(
    Crf(show_order=1, model='trainee_subject.educationquestionnaire'),
    Crf(show_order=2, model='trainee_subject.communityquestionnaire'),
    name='month12')
crf.update({1900: crfs_1900})

crfs_2200 = FormsCollection(
    Crf(show_order=1, model='trainee_subject.educationquestionnaire'),
    Crf(show_order=2, model='trainee_subject.communityquestionnaire'),
    name='month15')
Exemplo n.º 22
0
from dateutil.relativedelta import relativedelta

from edc_visit_schedule import VisitSchedule, Schedule, Visit
from edc_visit_schedule import FormsCollection, Crf

crfs = FormsCollection(
    Crf(show_order=1, model="edc_consent.crfone", required=True))

visit = Visit(
    code="1000",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    requisitions=None,
    crfs=crfs,
    requisitions_unscheduled=None,
    crfs_unscheduled=None,
    allow_unscheduled=False,
    facility_name="5-day-clinic",
)

schedule = Schedule(
    name="schedule1",
    onschedule_model="adverse_event_app.onschedule",
    offschedule_model="adverse_event_app.StudyTerminationConclusion",
    appointment_model="edc_appointment.appointment",
    consent_model="adverse_event_app.subjectconsent",
)

visit_schedule = VisitSchedule(
Exemplo n.º 23
0
app_label = "edc_metadata_rules"


class MockPanel(DummyPanel):
    """`requisition_model` is normally set when the lab profile
    is set up.
    """
    def __init__(self, name):
        super().__init__(
            requisition_model="edc_metadata_rules.subjectrequisition",
            name=name)


crfs0 = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.crfone", required=True),
    Crf(show_order=2, model=f"{app_label}.crftwo", required=True),
    Crf(show_order=3, model=f"{app_label}.crfthree", required=True),
    Crf(show_order=4, model=f"{app_label}.crffour", required=True),
    Crf(show_order=5, model=f"{app_label}.crffive", required=True),
)

crfs1 = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.crffour", required=True),
    Crf(show_order=2, model=f"{app_label}.crffive", required=True),
    Crf(show_order=3, model=f"{app_label}.crfsix", required=True),
)

crfs2 = FormsCollection(
    Crf(show_order=1, model=f"{app_label}.crfseven", required=True))
Exemplo n.º 24
0
from edc_visit_schedule import FormsCollection, Crf

crf = {}
crfs_1000 = FormsCollection(Crf(show_order=2,
                                model='pre_flourish.cyhuupreenrollment'),
                            name='enrollment')
crf.update({1000: crfs_1000})
Exemplo n.º 25
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

crfs = FormsCollection(
    Crf(show_order=1,
        model="edc_action_item.crflongitudinalone",
        required=True),
    Crf(show_order=2,
        model="edc_action_item.crflongitudinaltwo",
        required=True),
)

visit0 = Visit(
    code="1000",
    title="Day 1",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    requisitions=None,
    crfs=crfs,
    crfs_unscheduled=None,
    requisitions_unscheduled=None,
    facility_name="7-day-clinic",
)

visit1 = Visit(
    code="2000",
    title="Day 2",
    timepoint=1,
    rbase=relativedelta(days=1),
Exemplo n.º 26
0
from dateutil.relativedelta import relativedelta
from edc_visit_schedule import Crf, FormsCollection, Schedule, Visit, VisitSchedule

crfs = FormsCollection(
    Crf(show_order=1, model="adverse_event_app.crfone", required=True))

visit = Visit(
    code="1000",
    timepoint=0,
    rbase=relativedelta(days=0),
    rlower=relativedelta(days=0),
    rupper=relativedelta(days=6),
    title="Baseline",
    requisitions=None,
    crfs=crfs,
    requisitions_unscheduled=None,
    crfs_unscheduled=None,
    allow_unscheduled=False,
    facility_name="5-day-clinic",
)

schedule = Schedule(
    name="schedule1",
    onschedule_model="adverse_event_app.onschedule",
    offschedule_model="adverse_event_app.StudyTerminationConclusion",
    appointment_model="edc_appointment.appointment",
    consent_model="adverse_event_app.subjectconsent",
)

visit_schedule = VisitSchedule(
    name="visit_schedule",
Exemplo n.º 27
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(Crf(show_order=1,
                               model='td_maternal.maternalcovidscreening',
                               required=False,
                               additional=False),
                           name='maternal_crf_prn')

crf_1000 = FormsCollection(
    Crf(show_order=1, model='td_maternal.maternalultrasoundinitial'),
    Crf(show_order=2,
        model='td_maternal.maternalobstericalhistory',
        required=False),
    Crf(show_order=3,
        model='td_maternal.maternalmedicalhistory',
        required=False),
    Crf(show_order=4, model='td_maternal.maternaldemographics',
        required=False),
    Crf(show_order=5,
        model='td_maternal.maternallifetimearvhistory',
        required=False),
    Crf(show_order=6, model='td_maternal.maternalarvpreg', required=False),
    Crf(show_order=7,
        model='td_maternal.maternalclinicalmeasurementsone',
        required=False),
    Crf(show_order=8, model='td_maternal.maternalfoodsecurity'),
    Crf(show_order=9, model='td_maternal.cliniciannotes'),
    name='enrollment')

crf_1010 = FormsCollection(
    Crf(show_order=1, model='td_maternal.maternalrando', required=False),
Exemplo n.º 28
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(Crf(show_order=1,
                               model='ambition_subject.bloodresult'),
                           Crf(show_order=2,
                               model='ambition_subject.lumbarpuncturecsf'),
                           Crf(show_order=3,
                               model='ambition_subject.microbiology'),
                           Crf(show_order=4,
                               model='ambition_subject.radiology'),
                           name='prn')

crfs_unscheduled = FormsCollection(Crf(show_order=1,
                                       model='ambition_subject.bloodresult'),
                                   name='unscheduled')

crfs_d1 = FormsCollection(Crf(show_order=1,
                              model='ambition_subject.patienthistory'),
                          Crf(show_order=2,
                              model='ambition_subject.medicalexpenses'),
                          Crf(show_order=3,
                              model='ambition_subject.medicalexpensestwo',
                              required=False),
                          Crf(show_order=4,
                              model='ambition_subject.education'),
                          Crf(show_order=5,
                              model='ambition_subject.educationhoh',
                              required=False),
                          Crf(show_order=6,
                              model='ambition_subject.bloodresult'),
                          Crf(show_order=7,
Exemplo n.º 29
0
    VisitSchedule,
)
from edc_visit_schedule.tests.dummy_panel import DummyPanel


class Panel(DummyPanel):
    """`requisition_model` is normally set when the lab profile
    is set up.
    """
    def __init__(self, name):
        super().__init__(
            requisition_model="edc_appointment.subjectrequisition", name=name)


crfs = FormsCollection(
    Crf(show_order=1, model="edc_metadata.crfone", required=True),
    Crf(show_order=2, model="edc_metadata.crftwo", required=True),
    Crf(show_order=3, model="edc_metadata.crfthree", required=True),
    Crf(show_order=4, model="edc_metadata.crffour", required=True),
    Crf(show_order=5, model="edc_metadata.crffive", required=True),
)

requisitions = FormsCollection(
    Requisition(show_order=10,
                panel=Panel("one"),
                required=True,
                additional=False),
    Requisition(show_order=20,
                panel=Panel("two"),
                required=True,
                additional=False),
Exemplo n.º 30
0
from edc_visit_schedule import FormsCollection, Crf

crfs_prn = FormsCollection(
    Crf(show_order=200, model="mapitio_subject.deathreport", required=False),
    name="prn",
)

crfs_d1 = FormsCollection(
    Crf(show_order=100, model="mapitio_subject.indicators"),
    Crf(show_order=110, model="mapitio_subject.hivhistory"),
    Crf(show_order=120, model="mapitio_subject.ncdhistory"),
    Crf(show_order=130, model="mapitio_subject.biomedicalhistory"),
    Crf(show_order=140, model="mapitio_subject.followup"),
    Crf(show_order=145, model="mapitio_subject.followupindicators"),
    Crf(show_order=150, model="mapitio_subject.hivfollowup"),
    Crf(show_order=160, model="mapitio_subject.ncdfollowup"),
    Crf(show_order=170, model="mapitio_subject.biomedicalfollowup"),
    Crf(show_order=180, model="mapitio_subject.complications"),
    Crf(show_order=190, model="mapitio_subject.investigations"),
    name="day1",
)