def test_factor():
"Test basic Factor functionality"
# removing a cell
f = Factor('aabbcc')
eq_(f.cells, ('a', 'b', 'c'))
eq_(f.n_cells, 3)
f[f == 'c'] = 'a'
eq_(f.cells, ('a', 'b'))
eq_(f.n_cells, 2)
# cell order
a = np.tile(np.arange(3), 3)
# alphabetical
f = Factor(a, labels={0: 'c', 1: 'b', 2: 'a'})
eq_(f.cells, ('a', 'b', 'c'))
# ordered
f = Factor(a, labels=((0, 'c'), (1, 'b'), (2, 'a')))
eq_(f.cells, ('c', 'b', 'a'))
eq_(f[:2].cells, ('c', 'b'))
f[f == 'b'] = 'c'
eq_(f.cells, ('c', 'a'))
# label length
lens = [2, 5, 32, 2, 32, 524]
f = Factor(['a' * l for l in lens])
assert_array_equal(f.label_length(), lens)
# equality
f = Factor('aabbcc')
assert_equal(f == Factor('aabbcc'), True)
assert_equal(f == Factor('bbccaa'), False)
assert_equal(f == Factor('aabxxx'), (True, True, True, False, False, False))
assert_equal(f == Var(np.ones(6)), False)
def test_factor():
"Test basic Factor functionality"
# removing a cell
f = Factor('aabbcc')
eq_(f.cells, ('a', 'b', 'c'))
f[f == 'c'] = 'a'
eq_(f.cells, ('a', 'b'))
# cell order
a = np.tile(np.arange(3), 3)
# alphabetical
f = Factor(a, labels={0: 'c', 1: 'b', 2: 'a'})
eq_(f.cells, ('a', 'b', 'c'))
# ordered
f = Factor(a, labels=((0, 'c'), (1, 'b'), (2, 'a')))
eq_(f.cells, ('c', 'b', 'a'))
eq_(f[:2].cells, ('c', 'b'))
f[f == 'b'] = 'c'
eq_(f.cells, ('c', 'a'))
# label length
lens = [2, 5, 32, 2, 32, 524]
f = Factor(['a' * l for l in lens])
assert_array_equal(f.label_length(), lens)
def test_factor():
"Test basic Factor functionality"
# initializing
assert_array_equal(Factor('ab'), ['a', 'b'])
assert_array_equal(Factor('ab', repeat=2), ['a', 'a', 'b', 'b'])
assert_array_equal(Factor('ab', repeat=np.array([2, 1])), ['a', 'a', 'b'])
empty_factor = Factor([])
eq_(len(empty_factor), 0)
assert_dataobj_equal(Factor(np.empty(0)), empty_factor)
# from Factor
f = Factor('aabbcc')
assert_array_equal(Factor(f), f)
assert_array_equal(Factor(f, labels={'a': 'b'}), Factor('bbbbcc'))
# removing a cell
f = Factor('aabbcc')
eq_(f.cells, ('a', 'b', 'c'))
eq_(f.n_cells, 3)
f[f == 'c'] = 'a'
eq_(f.cells, ('a', 'b'))
eq_(f.n_cells, 2)
# cell order
a = np.tile(np.arange(3), 3)
# alphabetical
f = Factor(a, labels={0: 'c', 1: 'b', 2: 'a'})
eq_(f.cells, ('a', 'b', 'c'))
# ordered
f = Factor(a, labels=((0, 'c'), (1, 'b'), (2, 'a')))
eq_(f.cells, ('c', 'b', 'a'))
eq_(f[:2].cells, ('c', 'b'))
f[f == 'b'] = 'c'
eq_(f.cells, ('c', 'a'))
# label length
lens = [2, 5, 32, 2, 32, 524]
f = Factor(['a' * l for l in lens], 'f')
fl = f.label_length()
assert_array_equal(fl, lens)
eq_(fl.info['longname'], 'f.label_length()')
lens2 = [3, 5, 32, 2, 32, 523]
f2 = Factor(['b' * l for l in lens2], 'f2')
assert_array_equal(fl - f2.label_length(), [a - b for a, b in zip(lens, lens2)])
# equality
f = Factor('aabbcc')
assert_equal(f == Factor('aabbcc'), True)
assert_equal(f == Factor('bbccaa'), False)
assert_equal(f == Factor('aabxxx'), (True, True, True, False, False, False))
assert_equal(f == Var(np.ones(6)), False)
# Factor.as_var()
assert_array_equal(f.as_var(dict(list(zip('abc', list(range(3)))))), [0, 0, 1, 1, 2, 2])
assert_array_equal(f.as_var({'a': 1}, 2), [1, 1, 2, 2, 2, 2])
assert_raises(KeyError, f.as_var, {'a': 1})
# Factor.floodfill()
f = Factor([' ', ' ', '1', '2', ' ', ' ', '3', ' ', ' ', '2', ' ', ' ', '1'])
regions = [ 1, 1, 1, 2, 2, 2, 3, 3, 3, 2, 2, 1, 1]
regions2 = [ 1, 1, 1, 2, 2, 3, 3, 2, 2, 2, 2, 1, 1]
regions3 = [ 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2]
target3 = ['1', '1', '1', '2', '2', '2', '3', '3', '2', '2', '2', '2', '1']
target_p = [' ', ' ', '1', '2', '2', '2', '3', '3', '3', '2', '2', '2', '1']
assert_array_equal(f.floodfill(regions, ' '), Var(regions).as_factor())
assert_array_equal(f.floodfill(regions2, ' '), Var(regions2).as_factor())
assert_array_equal(f.floodfill(regions3, ' '), target3)
assert_array_equal(f.floodfill('previous', ' '), target_p)
f = Factor(['', '', 'a', '', 'e', 'r', ''])
assert_array_equal(f.floodfill([1, 1, 1, 11, 11, 11, 11]), Factor('aaaeerr'))
def test_factor():
"Test basic Factor functionality"
# initializing
assert_array_equal(Factor('ab'), ['a', 'b'])
assert_array_equal(Factor('ab', repeat=2), ['a', 'a', 'b', 'b'])
assert_array_equal(Factor('ab', repeat=np.array([2, 1])), ['a', 'a', 'b'])
empty_factor = Factor([])
eq_(len(empty_factor), 0)
assert_dataobj_equal(Factor(np.empty(0)), empty_factor)
# from Factor
f = Factor('aabbcc')
assert_array_equal(Factor(f), f)
assert_array_equal(Factor(f, labels={'a': 'b'}), Factor('bbbbcc'))
# removing a cell
f = Factor('aabbcc')
eq_(f.cells, ('a', 'b', 'c'))
eq_(f.n_cells, 3)
f[f == 'c'] = 'a'
eq_(f.cells, ('a', 'b'))
eq_(f.n_cells, 2)
# cell order
a = np.tile(np.arange(3), 3)
# alphabetical
f = Factor(a, labels={0: 'c', 1: 'b', 2: 'a'})
eq_(f.cells, ('a', 'b', 'c'))
# ordered
f = Factor(a, labels=((0, 'c'), (1, 'b'), (2, 'a')))
eq_(f.cells, ('c', 'b', 'a'))
eq_(f[:2].cells, ('c', 'b'))
f[f == 'b'] = 'c'
eq_(f.cells, ('c', 'a'))
# label length
lens = [2, 5, 32, 2, 32, 524]
f = Factor(['a' * l for l in lens], 'f')
fl = f.label_length()
assert_array_equal(fl, lens)
eq_(fl.info['longname'], 'f.label_length()')
lens2 = [3, 5, 32, 2, 32, 523]
f2 = Factor(['b' * l for l in lens2], 'f2')
assert_array_equal(fl - f2.label_length(), [a - b for a, b in zip(lens, lens2)])
# equality
f = Factor('aabbcc')
assert_equal(f == Factor('aabbcc'), True)
assert_equal(f == Factor('bbccaa'), False)
assert_equal(f == Factor('aabxxx'), (True, True, True, False, False, False))
assert_equal(f == Var(np.ones(6)), False)
# Factor.as_var()
assert_array_equal(f.as_var(dict(zip('abc', range(3)))), [0, 0, 1, 1, 2, 2])
assert_array_equal(f.as_var({'a': 1}, 2), [1, 1, 2, 2, 2, 2])
assert_raises(KeyError, f.as_var, {'a': 1})
# Factor.floodfill()
f = Factor([' ', ' ', '1', '2', ' ', ' ', '3', ' ', ' ', '2', ' ', ' ', '1'])
regions = [ 1, 1, 1, 2, 2, 2, 3, 3, 3, 2, 2, 1, 1]
regions2 = [ 1, 1, 1, 2, 2, 3, 3, 2, 2, 2, 2, 1, 1]
regions3 = [ 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2]
target3 = ['1', '1', '1', '2', '2', '2', '3', '3', '2', '2', '2', '2', '1']
target_p = [' ', ' ', '1', '2', '2', '2', '3', '3', '3', '2', '2', '2', '1']
assert_array_equal(f.floodfill(regions, ' '), Var(regions).as_factor())
assert_array_equal(f.floodfill(regions2, ' '), Var(regions2).as_factor())
assert_array_equal(f.floodfill(regions3, ' '), target3)
assert_array_equal(f.floodfill('previous', ' '), target_p)
f = Factor(['', '', 'a', '', 'e', 'r', ''])
assert_array_equal(f.floodfill([1, 1, 1, 11, 11, 11, 11]), Factor('aaaeerr'))