parser.add_argument('--ct_kernel', default=0, type=int) # 0 for Gibbs, 1 for MH
parser.add_argument('--no_plots', action='store_true')
return parser
if __name__ == "__main__":
import argparse
import experiment_runner.experiment_utils as eru
from experiment_runner.ExperimentRunner import ExperimentRunner, propagate_to_s3
parser = gen_parser()
args = parser.parse_args()
argsdict = eu.parser_args_to_dict(args)
generate_plots = not argsdict['no_plots']
results_filename = 'recovers_original_densities_results'
dirname_prefix = 'recovers_original_densities'
er = ExperimentRunner(run_experiment, dirname_prefix=dirname_prefix, bucket_str='experiment_runner', storage_type='fs')
er.do_experiments([argsdict])
if generate_plots:
for id in er.frame.index:
result = er._get_result(id)
this_dirname = eru._generate_dirname(dirname_prefix, 10, result['config'])
filename_img = os.path.join(dirname_prefix, this_dirname, results_filename+'.png')
eu.plot_recovers_original_densities(result, filename=filename_img)
pass
pass
do_plots = not args.no_plots
do_long = args.do_long
_divisor = args._divisor
# create configs
arg_list_to_config = partial(eu.arg_list_to_config,
geweke_utils.generate_parser(),
arbitrate_args=geweke_utils.arbitrate_args)
args_list = generate_args_list(base_num_rows, num_iters, do_long, _divisor)
config_list = map(arg_list_to_config, args_list)
# do experiments
er = ExperimentRunner(geweke_utils.run_geweke, storage_type='fs',
dirname_prefix=dirname,
bucket_str='experiment_runner')
er.do_experiments(config_list)
# push to s3
propagate_to_s3(er)
if do_plots:
for id in er.frame.index:
result = er._get_result(id)
geweke_utils.plot_result(result, dirname)
pass
pass
print er.frame
parser = gen_parser()
args = parser.parse_args()
argsdict = eu.parser_args_to_dict(args)
generate_plots = not argsdict['no_plots']
use_runner = not argsdict['no_runner']
results_filename = 'haystacks_break_results'
dirname_prefix = 'haystacks_break'
er = ExperimentRunner(run_experiment, dirname_prefix=dirname_prefix, bucket_str='experiment_runner', storage_type='fs')
if use_runner:
er.do_experiments([argsdict], do_multiprocessing=False)
if generate_plots:
for id in er.frame.index:
result = er._get_result(id)
this_dirname = eru._generate_dirname(dirname_prefix, 10, result['config'])
filename_img = os.path.join(dirname_prefix, this_dirname, results_filename+'.png')
eu.plot_haystacks_break(result, filename=filename_img)
pass
else:
result = run_experiment(argsdict)
if generate_plots:
this_dirname = eru._generate_dirname(dirname_prefix, 10, result['config'])
filename_img = os.path.join(dirname_prefix, this_dirname, results_filename+'.png')
eu.make_folder(os.path.join(dirname_prefix, this_dirname))
return
def plot_results(frame, save=True, plot_prefix=None, dirname='./'):
# generate each type of plot
filter_join = lambda join_with, list: join_with.join(filter(None, list))
for vary_what in ['rows', 'cols', 'clusters', 'views']:
plot_filename = filter_join('_', [plot_prefix, 'vary', vary_what])
_plot_results(frame, vary_what, plot_filename)
if save:
pu.savefig_legend_outside(plot_filename, dir=dirname)
pass
pass
return
if __name__ == '__main__':
from experiment_runner.ExperimentRunner import ExperimentRunner
config_list = gen_configs(
kernel_list = _kernel_list,
num_rows=[10, 100],
)
dirname = 'timing_analysis'
er = ExperimentRunner(runner, dirname_prefix=dirname)
er.do_experiments(config_list, dirname)
print er.frame
results_dict = er.get_results(er.frame[er.frame.same_shape])
import argparse
import experiment_runner.experiment_utils as eru
from experiment_runner.ExperimentRunner import ExperimentRunner, propagate_to_s3
parser = gen_parser()
args = parser.parse_args()
argsdict = eu.parser_args_to_dict(args)
generate_plots = not argsdict['no_plots']
results_filename = 'estimate_the_full_joint_results'
dirname_prefix = 'estimate_the_full_joint'
er = ExperimentRunner(run_experiment,
dirname_prefix=dirname_prefix,
bucket_str='experiment_runner',
storage_type='fs')
er.do_experiments([argsdict])
if generate_plots:
for id in er.frame.index:
result = er._get_result(id)
this_dirname = eru._generate_dirname(dirname_prefix, 10,
result['config'])
filename_img = os.path.join(dirname_prefix, this_dirname,
results_filename + '.png')
eu.plot_estimate_the_full_joint(result, filename=filename_img)
pass
pass
