def _create_data_block(self, partition_id):
dbm = data_block_manager.DataBlockManager(self.data_source, partition_id)
self.assertEqual(dbm.get_dumped_data_block_count(), 0)
self.assertEqual(dbm.get_lastest_data_block_meta(), None)
leader_index = 0
follower_index = 65536
for i in range(64):
builder = DataBlockBuilder(
common.data_source_data_block_dir(self.data_source),
self.data_source.data_source_meta.name,
partition_id, i,
dj_pb.WriterOptions(output_writer='TF_RECORD'), None
)
builder.set_data_block_manager(dbm)
for j in range(4):
feat = {}
example_id = '{}'.format(i * 1024 + j).encode()
feat['example_id'] = tf.train.Feature(
bytes_list=tf.train.BytesList(value=[example_id]))
event_time = random.randint(0, 10)
feat['event_time'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[event_time]))
feat['leader_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[leader_index]))
feat['follower_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[follower_index]))
example = tf.train.Example(features=tf.train.Features(feature=feat))
builder.append_item(TfExampleItem(example.SerializeToString()),
leader_index, follower_index)
leader_index += 1
follower_index += 1
self.data_block_matas.append(builder.finish_data_block())
def add_data_block(self, partition_id, x, y):
dbm = self._dbms[partition_id]
builder = DataBlockBuilder(
common.data_source_data_block_dir(self._data_source),
self._data_source.data_source_meta.name, partition_id,
dbm.get_dumped_data_block_count(),
dj_pb.WriterOptions(output_writer="TF_RECORD"), None)
builder.set_data_block_manager(dbm)
for i in range(x.shape[0]):
feat = {}
exam_id = '{}'.format(i).encode()
feat['example_id'] = Feature(
bytes_list=BytesList(value=[exam_id]))
feat['event_time'] = Feature(
int64_list = Int64List(value=[i])
)
feat['x'] = Feature(float_list=FloatList(value=list(x[i])))
if y is not None:
feat['y'] = Feature(int64_list=Int64List(value=[y[i]]))
example = Example(features=Features(feature=feat))
builder.append_item(TfExampleItem(example.SerializeToString()), i, 0)
return builder.finish_data_block()
def _make_data_block_builder(self, meta):
assert self._partition_id == meta.partition_id, \
"partition id of building data block meta mismatch "\
"{} != {}".format(self._partition_id, meta.partition_id)
builder = None
expt = None
try:
builder = DataBlockBuilder(
common.data_source_data_block_dir(self._data_source),
self._data_source.data_source_meta.name,
self._partition_id,
meta.data_block_index,
self._data_block_builder_options
)
builder.init_by_meta(meta)
builder.set_data_block_manager(self._data_block_manager)
yield builder
except Exception as e: # pylint: disable=broad-except
logging.warning("Failed make data block builder, " \
"reason %s", e)
expt = e
if builder is not None:
del builder
if expt is not None:
raise expt
def _create_data_block(self, data_source, partition_id, x, y):
data_block_metas = []
dbm = data_block_manager.DataBlockManager(data_source, partition_id)
self.assertEqual(dbm.get_dumped_data_block_count(), 0)
self.assertEqual(dbm.get_lastest_data_block_meta(), None)
N = 200
chunk_size = x.shape[0] // N
leader_index = 0
follower_index = N * chunk_size * 10
for i in range(N):
builder = DataBlockBuilder(
common.data_source_data_block_dir(data_source),
data_source.data_source_meta.name,
partition_id, i,
dj_pb.WriterOptions(output_writer="TF_RECORD"), None
)
builder.set_data_block_manager(dbm)
for j in range(chunk_size):
feat = {}
idx = i * chunk_size + j
exam_id = '{}'.format(idx).encode()
feat['example_id'] = Feature(
bytes_list=BytesList(value=[exam_id]))
evt_time = random.randint(1, 1000)
feat['event_time'] = Feature(
int64_list = Int64List(value=[evt_time])
)
feat['x'] = Feature(float_list=FloatList(value=list(x[idx])))
if y is not None:
feat['y'] = Feature(int64_list=Int64List(value=[y[idx]]))
feat['leader_index'] = Feature(
int64_list = Int64List(value=[leader_index])
)
feat['follower_index'] = Feature(
int64_list = Int64List(value=[follower_index])
)
example = Example(features=Features(feature=feat))
builder.append_item(TfExampleItem(example.SerializeToString()),
leader_index, follower_index)
leader_index += 1
follower_index += 1
data_block_metas.append(builder.finish_data_block())
self.max_index = follower_index
return data_block_metas
def generate_follower_data_block(self):
dbm = data_block_manager.DataBlockManager(self.data_source_f, 0)
self.assertEqual(dbm.get_dumped_data_block_count(), 0)
self.assertEqual(dbm.get_lastest_data_block_meta(), None)
leader_index = 0
follower_index = 65536
self.dumped_metas = []
for i in range(5):
builder = DataBlockBuilder(
common.data_source_data_block_dir(self.data_source_f),
self.data_source_f.data_source_meta.name, 0, i,
dj_pb.WriterOptions(output_writer='TF_RECORD'), None)
builder.set_data_block_manager(dbm)
for j in range(1024):
feat = {}
example_id = '{}'.format(i * 1024 + j).encode()
feat['example_id'] = tf.train.Feature(
bytes_list=tf.train.BytesList(value=[example_id]))
event_time = 150000000 + i * 1024 + j
feat['event_time'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[event_time]))
feat['leader_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[leader_index]))
feat['follower_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[follower_index]))
example = tf.train.Example(features=tf.train.Features(
feature=feat))
builder.append_item(TfExampleItem(example.SerializeToString()),
leader_index, follower_index)
leader_index += 3
follower_index += 1
meta = builder.finish_data_block()
self.dumped_metas.append(meta)
self.leader_start_index = 0
self.leader_end_index = leader_index
self.assertEqual(dbm.get_dumped_data_block_count(), 5)
for (idx, meta) in enumerate(self.dumped_metas):
self.assertEqual(dbm.get_data_block_meta_by_index(idx), meta)
class ExampleJoiner(object):
def __init__(self, example_joiner_options, raw_data_options, etcd,
data_source, partition_id):
self._lock = threading.Lock()
self._example_joiner_options = example_joiner_options
self._raw_data_options = raw_data_options
self._data_source = data_source
self._partition_id = partition_id
self._leader_visitor = \
ExampleIdVisitor(etcd, self._data_source, self._partition_id)
self._follower_visitor = \
RawDataVisitor(etcd, self._data_source,
self._partition_id, raw_data_options)
self._data_block_manager = \
DataBlockManager(self._data_source, self._partition_id)
self._data_block_builder = None
self._state_stale = False
self._follower_restart_index = 0
self._sync_example_id_finished = False
self._raw_data_finished = False
self._join_finished = False
self._latest_dump_timestamp = time.time()
self._sync_state()
@contextmanager
def make_example_joiner(self):
state_stale = self._is_state_stale()
self._acuqire_state_stale()
yield self._inner_joiner(state_stale)
self._release_state_stale()
@classmethod
def name(cls):
return 'BASE_EXAMPLE_JOINER'
def get_data_block_meta_by_index(self, index):
with self._lock:
manager = self._data_block_manager
return self._join_finished, \
manager.get_data_block_meta_by_index(index)
def get_dumped_data_block_count(self):
return self._data_block_manager.get_dumped_data_block_count()
def is_join_finished(self):
with self._lock:
return self._join_finished
def set_sync_example_id_finished(self):
with self._lock:
self._sync_example_id_finished = True
def set_raw_data_finished(self):
with self._lock:
self._raw_data_finished = True
def is_sync_example_id_finished(self):
with self._lock:
return self._sync_example_id_finished
def is_raw_data_finished(self):
with self._lock:
return self._raw_data_finished
def need_join(self):
with self._lock:
if self._join_finished:
return False
if self._state_stale or self._sync_example_id_finished:
return True
if self._follower_visitor.is_visitor_stale() or \
self._leader_visitor.is_visitor_stale():
return True
if not self._follower_visitor.finished() and \
not self._leader_visitor.finished():
return True
return self._need_finish_data_block_since_interval()
def _inner_joiner(self, reset_state):
raise NotImplementedError(
"_inner_joiner not implement for base class: %s" %
ExampleJoiner.name())
def _is_state_stale(self):
with self._lock:
return self._state_stale
def _active_visitors(self):
self._leader_visitor.active_visitor()
self._follower_visitor.active_visitor()
def _sync_state(self):
meta = self._data_block_manager.get_lastest_data_block_meta()
if meta is not None:
try:
self._leader_visitor.seek(meta.leader_end_index)
except StopIteration:
logging.warning("leader visitor finished")
try:
self._follower_visitor.seek(meta.follower_restart_index)
except StopIteration:
logging.warning("follower visitor finished")
else:
self._leader_visitor.reset()
self._follower_visitor.reset()
def _get_data_block_builder(self, create_if_no_existed):
if self._data_block_builder is None and create_if_no_existed:
data_block_index = \
self._data_block_manager.get_dumped_data_block_count()
self._data_block_builder = DataBlockBuilder(
self._data_source.data_block_dir,
self._data_source.data_source_meta.name, self._partition_id,
data_block_index,
self._example_joiner_options.data_block_dump_threshold)
self._data_block_builder.set_data_block_manager(
self._data_block_manager)
self._data_block_builder.set_follower_restart_index(
self._follower_restart_index)
return self._data_block_builder
def _finish_data_block(self):
if self._data_block_builder is not None:
meta = self._data_block_builder.finish_data_block()
self._reset_data_block_builder()
self._update_latest_dump_timestamp()
return meta
return None
def _reset_data_block_builder(self):
builder = None
with self._lock:
builder = self._data_block_builder
self._data_block_builder = None
if builder is not None:
del builder
def _update_latest_dump_timestamp(self):
with self._lock:
self._latest_dump_timestamp = time.time()
def _acuqire_state_stale(self):
with self._lock:
self._state_stale = True
def _release_state_stale(self):
with self._lock:
self._state_stale = False
def _set_join_finished(self):
with self._lock:
self._join_finished = True
def _need_finish_data_block_since_interval(self):
dump_interval = self._example_joiner_options.data_block_dump_interval
duration_since_dump = time.time() - self._latest_dump_timestamp
return 0 < dump_interval <= duration_since_dump
def test_data_block_manager(self):
data_block_datas = []
data_block_metas = []
leader_index = 0
follower_index = 65536
for i in range(5):
fill_examples = []
builder = DataBlockBuilder(
self.data_source.data_block_dir,
self.data_source.data_source_meta.name, 0, i,
dj_pb.WriterOptions(output_writer='TF_RECORD'), None)
builder.set_data_block_manager(self.data_block_manager)
for j in range(1024):
feat = {}
example_id = '{}'.format(i * 1024 + j).encode()
feat['example_id'] = tf.train.Feature(
bytes_list=tf.train.BytesList(value=[example_id]))
event_time = 150000000 + i * 1024 + j
feat['event_time'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[event_time]))
feat['leader_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[leader_index]))
feat['follower_index'] = tf.train.Feature(
int64_list=tf.train.Int64List(value=[follower_index]))
example = tf.train.Example(features=tf.train.Features(
feature=feat))
builder.append_item(TfExampleItem(example.SerializeToString()),
leader_index, follower_index)
fill_examples.append((example, {
'example_id': example_id,
'event_time': event_time,
'leader_index': leader_index,
'follower_index': follower_index
}))
leader_index += 1
follower_index += 1
meta = builder.finish_data_block()
data_block_datas.append(fill_examples)
data_block_metas.append(meta)
self.assertEqual(self.data_block_manager.get_dumped_data_block_count(),
5)
self.assertEqual(self.data_block_manager.get_lastest_data_block_meta(),
data_block_metas[-1])
for (idx, meta) in enumerate(data_block_metas):
self.assertEqual(
self.data_block_manager.get_data_block_meta_by_index(idx),
meta)
self.assertEqual(
meta.block_id,
common.encode_block_id(self.data_source.data_source_meta.name,
meta))
self.assertEqual(
self.data_block_manager.get_data_block_meta_by_index(5), None)
data_block_dir = os.path.join(self.data_source.data_block_dir,
common.partition_repr(0))
for (i, meta) in enumerate(data_block_metas):
data_block_fpath = os.path.join(
data_block_dir, meta.block_id) + common.DataBlockSuffix
data_block_meta_fpath = os.path.join(
data_block_dir,
common.encode_data_block_meta_fname(
self.data_source.data_source_meta.name, 0,
meta.data_block_index))
self.assertTrue(gfile.Exists(data_block_fpath))
self.assertTrue(gfile.Exists(data_block_meta_fpath))
fiter = tf.io.tf_record_iterator(data_block_meta_fpath)
remote_meta = text_format.Parse(
next(fiter).decode(), dj_pb.DataBlockMeta())
self.assertEqual(meta, remote_meta)
for (j, record) in enumerate(
tf.io.tf_record_iterator(data_block_fpath)):
example = tf.train.Example()
example.ParseFromString(record)
stored_data = data_block_datas[i][j]
self.assertEqual(example, stored_data[0])
feat = example.features.feature
stored_feat = stored_data[1]
self.assertTrue('example_id' in feat)
self.assertTrue('example_id' in stored_feat)
self.assertEqual(stored_feat['example_id'],
'{}'.format(i * 1024 + j).encode())
self.assertEqual(stored_feat['example_id'],
feat['example_id'].bytes_list.value[0])
self.assertTrue('event_time' in feat)
self.assertTrue('event_time' in stored_feat)
self.assertEqual(stored_feat['event_time'],
feat['event_time'].int64_list.value[0])
self.assertTrue('leader_index' in feat)
self.assertTrue('leader_index' in stored_feat)
self.assertEqual(stored_feat['leader_index'],
feat['leader_index'].int64_list.value[0])
self.assertTrue('follower_index' in feat)
self.assertTrue('follower_index' in stored_feat)
self.assertEqual(stored_feat['follower_index'],
feat['follower_index'].int64_list.value[0])
self.assertEqual(j, 1023)
data_block_manager2 = data_block_manager.DataBlockManager(
self.data_source, 0)
self.assertEqual(self.data_block_manager.get_dumped_data_block_count(),
5)
class ExampleJoiner(object):
def __init__(self, example_joiner_options, raw_data_options,
data_block_builder_options, kvstore, data_source,
partition_id):
self._lock = threading.Lock()
self._example_joiner_options = example_joiner_options
self._raw_data_options = raw_data_options
self._data_source = data_source
self._partition_id = partition_id
self._leader_visitor = \
ExampleIdVisitor(kvstore, self._data_source, self._partition_id)
self._follower_visitor = \
RawDataVisitor(kvstore, self._data_source,
self._partition_id, raw_data_options)
self._data_block_manager = \
DataBlockManager(self._data_source, self._partition_id)
meta = self._data_block_manager.get_lastest_data_block_meta()
if meta is None:
self._joiner_stats = JoinerStats(0, -1, -1)
else:
stats_info = meta.joiner_stats_info
self._joiner_stats = JoinerStats(stats_info.stats_cum_join_num,
stats_info.leader_stats_index,
stats_info.follower_stats_index)
self._data_block_builder_options = data_block_builder_options
self._data_block_builder = None
self._state_stale = False
self._follower_restart_index = 0
self._sync_example_id_finished = False
self._raw_data_finished = False
self._join_finished = False
ds_name = self._data_source.data_source_meta.name
self._metrics_tags = {
'data_source_name': ds_name,
'partition': partition_id,
'joiner_name': self.name()
}
self._optional_stats = OptionalStats(raw_data_options,
self._metrics_tags)
self._latest_dump_timestamp = time.time()
self._sync_state()
@contextmanager
def make_example_joiner(self):
state_stale = self._is_state_stale()
self._acuqire_state_stale()
yield self._inner_joiner(state_stale)
self._release_state_stale()
@classmethod
def name(cls):
return 'BASE_EXAMPLE_JOINER'
def get_data_block_meta_by_index(self, index):
with self._lock:
manager = self._data_block_manager
return self._join_finished, \
manager.get_data_block_meta_by_index(index)
def get_dumped_data_block_count(self):
return self._data_block_manager.get_dumped_data_block_count()
def is_join_finished(self):
with self._lock:
return self._join_finished
def set_sync_example_id_finished(self):
with self._lock:
self._sync_example_id_finished = True
def set_raw_data_finished(self):
with self._lock:
self._raw_data_finished = True
def is_sync_example_id_finished(self):
with self._lock:
return self._sync_example_id_finished
def is_raw_data_finished(self):
with self._lock:
return self._raw_data_finished
def need_join(self):
with self._lock:
if self._join_finished:
return False
if self._state_stale or self._sync_example_id_finished:
return True
if self._follower_visitor.is_visitor_stale() or \
self._leader_visitor.is_visitor_stale():
return True
if not self._follower_visitor.finished() and \
not self._leader_visitor.finished():
return True
return self._need_finish_data_block_since_interval()
def _prepare_join(self, state_stale):
if state_stale:
self._sync_state()
self._reset_data_block_builder()
sync_example_id_finished = self.is_sync_example_id_finished()
raw_data_finished = self.is_raw_data_finished()
self._active_visitors()
return sync_example_id_finished, raw_data_finished
def _inner_joiner(self, reset_state):
raise NotImplementedError(
"_inner_joiner not implement for base class: %s" %
ExampleJoiner.name())
def _is_state_stale(self):
with self._lock:
return self._state_stale
def _active_visitors(self):
self._leader_visitor.active_visitor()
self._follower_visitor.active_visitor()
def _sync_state(self):
meta = self._data_block_manager.get_lastest_data_block_meta()
if meta is not None:
try:
self._leader_visitor.seek(meta.leader_end_index)
except StopIteration:
logging.warning("leader visitor finished")
try:
self._follower_visitor.seek(meta.follower_restart_index)
except StopIteration:
logging.warning("follower visitor finished")
else:
self._leader_visitor.reset()
self._follower_visitor.reset()
def _get_data_block_builder(self, create_if_no_existed):
if self._data_block_builder is None and create_if_no_existed:
data_block_index = \
self._data_block_manager.get_dumped_data_block_count()
self._data_block_builder = DataBlockBuilder(
common.data_source_data_block_dir(self._data_source),
self._data_source.data_source_meta.name, self._partition_id,
data_block_index, self._data_block_builder_options,
self._example_joiner_options.data_block_dump_threshold)
self._data_block_builder.set_data_block_manager(
self._data_block_manager)
self._data_block_builder.set_follower_restart_index(
self._follower_restart_index)
return self._data_block_builder
def _finish_data_block(self):
if self._data_block_builder is not None:
self._data_block_builder.set_join_stats_info(
self._create_join_stats_info())
meta = self._data_block_builder.finish_data_block(
True, self._metrics_tags)
self._optional_stats.emit_optional_stats()
self._reset_data_block_builder()
self._update_latest_dump_timestamp()
return meta
return None
def _create_join_stats_info(self):
builder = self._get_data_block_builder(False)
nstats_cum_join_num = self._joiner_stats.calc_stats_joined_num()
nactual_cum_join_num = 0 if builder is None \
else builder.example_count()
meta = self._data_block_manager.get_lastest_data_block_meta()
if meta is not None:
nactual_cum_join_num += meta.joiner_stats_info.actual_cum_join_num
return dj_pb.JoinerStatsInfo(
stats_cum_join_num=nstats_cum_join_num,
actual_cum_join_num=nactual_cum_join_num,
leader_stats_index=self._joiner_stats.get_leader_stats_index(),
follower_stats_index=self._joiner_stats.get_follower_stats_index())
def _reset_data_block_builder(self):
builder = None
with self._lock:
builder = self._data_block_builder
self._data_block_builder = None
if builder is not None:
del builder
def _update_latest_dump_timestamp(self):
data_block_dump_duration = time.time() - self._latest_dump_timestamp
metrics.emit_timer(name='data_block_dump_duration',
value=int(data_block_dump_duration),
tags=self._metrics_tags)
self._latest_dump_timestamp = time.time()
def _acuqire_state_stale(self):
with self._lock:
self._state_stale = True
def _release_state_stale(self):
with self._lock:
self._state_stale = False
def _set_join_finished(self):
with self._lock:
self._join_finished = True
def _need_finish_data_block_since_interval(self):
dump_interval = self._example_joiner_options.data_block_dump_interval
duration_since_dump = time.time() - self._latest_dump_timestamp
return 0 < dump_interval <= duration_since_dump
