def search(self, data, order): # no need to separate out interventional data ci = PCCI(CBFSeparator(data), constrain_order=order, hill_climb_cond=self._hill_climb_cond) skel = ci.skeleton() g = ADG(vertices=skel.vertices()) for a, b in skel.lines(): if a in ci.potential_ancestors(b): g.add_arrow(a, b) else: g.add_arrow(b, a) return g
best_score = score best_parents = parents except NameError: best_score = score best_parents = parents return best_parents def sublist(candidates,n): if not candidates or n == 0: yield [] else: first = [candidates[0]] for sl in sublist(candidates[1:],n-1): yield first + sl for sl in sublist(candidates[1:],n): yield sl best_adg = ADG(ordering) for i, v in enumerate(ordering): if verbose: print 'Finding best parents for %s' % v parents = best_parents(v,ordering[:i]) for parent in parents: best_adg.add_arrow(parent,v) print 'Best ADG' print '*********' print best_adg
best_score = score best_parents = parents except NameError: best_score = score best_parents = parents return best_parents def sublist(candidates, n): if not candidates or n == 0: yield [] else: first = [candidates[0]] for sl in sublist(candidates[1:], n - 1): yield first + sl for sl in sublist(candidates[1:], n): yield sl best_adg = ADG(ordering) for i, v in enumerate(ordering): if verbose: print 'Finding best parents for %s' % v parents = best_parents(v, ordering[:i]) for parent in parents: best_adg.add_arrow(parent, v) print 'Best ADG' print '*********' print best_adg