def genetrack_link( self, hda, type, app, base_url ):
ret_val = []
if hda.has_data:
# Get the disk file name and data id
file_name = hda.dataset.get_file_name()
data_id = hda.dataset.id
# Make it secure
hashkey = hmac_new( app.config.tool_secret, file_name )
encoded = binascii.hexlify( file_name )
for name, url in util.get_genetrack_sites():
if name.lower() in app.config.genetrack_display_sites:
# send both parameters filename and hashkey
link = "%s?filename=%s&hashkey=%s&id=%s&GALAXY_URL=%s" % ( url, encoded, hashkey, data_id, base_url )
ret_val.append( ( name, link ) )
return ret_val
def genetrack_link(self, hda, type, app, base_url):
ret_val = []
if hda.has_data:
# Get the disk file name and data id
file_name = hda.dataset.get_file_name()
data_id = hda.dataset.id
# Make it secure
hashkey = hmac_new(app.config.tool_secret, file_name)
encoded = binascii.hexlify(file_name)
for name, url in util.get_genetrack_sites():
if name.lower() in app.config.genetrack_display_sites:
# send both parameters filename and hashkey
link = "%s?filename=%s&hashkey=%s&id=%s&GALAXY_URL=%s" % (
url, encoded, hashkey, data_id, base_url)
ret_val.append((name, link))
return ret_val
def genetrack_link( self, hda, type, app, base_url ):
ret_val = []
if hda.dataset.has_data():
# Get the disk file name and data id
file_name = hda.dataset.get_file_name()
data_id = quote_plus( str( hda.id ) )
galaxy_url = quote_plus( "%s%s" % ( base_url, url_for( controller = 'tool_runner', tool_id='predict2genetrack' ) ) )
# Make it secure
hashkey = quote_plus( hmac_new( app.config.tool_secret, file_name ) )
encoded = quote_plus( binascii.hexlify( file_name ) )
for name, url in util.get_genetrack_sites():
if name.lower() in app.config.genetrack_display_sites:
# send both parameters filename and hashkey
link = "%s?filename=%s&hashkey=%s&input=%s&GALAXY_URL=%s" % ( url, encoded, hashkey, data_id, galaxy_url )
ret_val.append( ( name, link ) )
return ret_val
def genetrack_link(self, hda, type, app, base_url):
ret_val = []
if hda.dataset.has_data():
# Get the disk file name and data id
file_name = hda.dataset.get_file_name()
data_id = quote_plus(str(hda.id))
galaxy_url = quote_plus("%s%s" %
(base_url,
url_for(controller='tool_runner',
tool_id='predict2genetrack')))
# Make it secure
hashkey = quote_plus(hmac_new(app.config.tool_secret, file_name))
encoded = quote_plus(binascii.hexlify(file_name))
for name, url in util.get_genetrack_sites():
if name.lower() in app.config.genetrack_display_sites:
# send both parameters filename and hashkey
link = "%s?filename=%s&hashkey=%s&input=%s&GALAXY_URL=%s" % (
url, encoded, hashkey, data_id, galaxy_url)
ret_val.append((name, link))
return ret_val
