Exemplos de GenCoor.overlap em Python

Exemplo n.º 1

def test_GenCoor_overlap4():
    g1 = GenCoor(chrom="chr1", start=1, end=100, name="test", strand=".")
    g2 = GenCoor(chrom="chr1", start=99, end=110, name="test", strand=".")
    assert g1.overlap(region=g2) is True

Exemplo n.º 2

def test_GenCoor_overlap6():
    g1 = GenCoor(chrom="chr1", start=1, end=100, name="test", strand="-")
    g2 = GenCoor(chrom="chr1", start=99, end=110, name="test", strand="-")
    assert g1.overlap(region=g2, strand_specific=True) is True

Exemplo n.º 3

def test_GenCoor_overlap8():
    g1 = GenCoor(chrom="chr1", start=50, end=50, name="test", strand=".")
    g2 = GenCoor(chrom="chr1", start=50, end=50, name="test", strand=".")
    assert g1.overlap(region=g2) is True