if save:
bu.make_all_pardirs(agg_path)
if reprocess:
datafiles, lengths = bu.find_all_fnames(ddir, ext=config.extensions['data'], \
substr=substr, sort_by_index=True, \
sort_time=False)
datafiles = datafiles[:Nfiles]
agg_dat = gu.AggregateData(datafiles, p0_bead=p0_bead, harms=harms, \
plot_harm_extraction=plot_harms, new_trap=new_trap, \
step_cal_drive_freq=71.0, ncore=ncore, noisebins=10, \
aux_data=aux_data, suppress_off_diag=suppress_off_diag, \
fake_attractor_data=fake_attractor_data, \
fake_attractor_data_amp=fake_attractor_data_amp, \
fake_attractor_data_dc=fake_attractor_data_dc, \
fake_attractor_data_freq=fake_attractor_data_freq, \
fake_attractor_data_axis=fake_attractor_data_axis)
agg_dat.load_grav_funcs(theory_data_dir)
if save:
agg_dat.save(agg_path)
agg_dat.bin_rough_stage_positions()
#agg_dat.average_resp_by_coordinate()
# agg_dat.plot_force_plane(resp=0, fig_ind=1, show=True)
# agg_dat.plot_force_plane(resp=1, fig_ind=2, show=False)
for ddir in data_dirs:
paths = gu.build_paths(ddir, opt_ext=opt_ext)
datafiles = bu.find_all_fnames(ddir)
p0_bead = p0_bead_dict[paths['date']]
if load_files:
agg_dat = gu.AggregateData(datafiles, p0_bead=p0_bead, harms=harms, \
elec_drive=False, elec_ind=0, plot_harm_extraction=False, \
tfdate=tfdate)
agg_dat.save(paths['agg_path'])
else:
agg_dat = gu.AggregateData([], p0_bead=p0_bead, harms=harms)
agg_dat.load(paths['agg_path'])
agg_dat.p0_bead = p0_bead
agg_dat.bin_rough_stage_positions(ax_disc=1.0)
#agg_dat.plot_force_plane(resp=0, fig_ind=1, show=False)
#agg_dat.plot_force_plane(resp=1, fig_ind=2, show=False)
#agg_dat.plot_force_plane(resp=2, fig_ind=3, show=False)
#force_plane_dict = agg_dat.get_vector_force_plane(resp=(0,2), fig_ind=1, \
opt_ext = '_harms'
for harm in harms:
opt_ext += '-' + str(int(harm))
opt_ext += '_first-{:d}'.format(Nfiles)
if len(substr):
opt_ext += '_{:s}'.format(substr)
for ddir in data_dirs:
paths = gu.build_paths(ddir, opt_ext, new_trap=new_trap)
agg_path = paths['agg_path']
p0_bead = p0_bead_dict[paths['date']]
### Open an empty class
agg_dat = gu.AggregateData([],
p0_bead=p0_bead,
harms=harms,
new_trap=new_trap)
### Load the pre-processed AggregateData class
agg_dat.load(agg_path)
agg_dat.load_grav_funcs(theory_data_dir)
# ### A method that helps for grid data, but is unimportant for a single position.
# ### It still has to be run for the later functions to work
# agg_dat.bin_rough_stage_positions()
yuklambdas = agg_dat.gfuncs_class.lambdas
lambind = np.argmin(np.abs(yuklambdas - yuklambda))
### Shit to access the innards of the class for what you want. It retuns an array of
### the following shape: (Nfile, Nlambda, n_err+1, 3, 2*nharmonics)
def volume_ndim_ellipsoid(axes):
ndim = len(axes)
prefac = np.pi**(float(ndim) / 2.0) / special.gamma(0.5 * float(ndim) + 1)
return prefac * np.prod(axes)
for ddir in data_dirs:
# Skip the ones I've already calculated
#if ddir == data_dirs[0]:
# continue
print()
paths = gu.build_paths(ddir, opt_ext=opt_ext, new_trap=new_trap)
p0_bead = p0_bead_dict[paths['date']]
agg_dat = gu.AggregateData([], p0_bead=p0_bead, harms=harms)
if load_agg:
agg_dat.load(paths['agg_path'])
agg_dat.gfuncs_class.reload_grav_funcs()
bu.make_all_pardirs(paths['alpha_dict_path'])
agg_dat.save_alpha_dict(paths['alpha_dict_path'])
#agg_dat.save_alpha_arr(alpha_arr_path)
elif load_alpha_arr:
agg_dat.load_alpha_dict(paths['alpha_dict_path'])
if load_agg and plot:
agg_dat.plot_force_plane(resp=0, fig_ind=1, show=False)
agg_dat.plot_force_plane(resp=1, fig_ind=2, show=False)
agg_dat.plot_force_plane(resp=2, fig_ind=3, show=True)
#print(agg_dat.alpha_xyz_dict[0.0][370.0].keys())#.keys())
############################################################
############################################################
############################################################
for ddir in data_dirs:
paths = gu.build_paths(ddir, opt_ext=opt_ext)
datafiles = bu.find_all_fnames(ddir)
p0_bead = p0_bead_dict[paths['date']]
if load_files:
agg_dat = gu.AggregateData(datafiles, p0_bead=p0_bead, harms=harms, \
elec_drive=True, elec_ind=0, maxfreq=maxfreq, \
plot_harm_extraction=False, dim3=dim3, \
extract_resonant_freq=False,noiselim=(47.0,47.0), \
tfdate=tfdate)
agg_dat.save(paths['agg_path'])
else:
agg_dat = gu.AggregateData([], p0_bead=p0_bead, harms=harms, dim3=dim3, \
tfdate=tfdate)
agg_dat.load(paths['agg_path'])
agg_dat.bin_rough_stage_positions(ax_disc=1.0, dim3=dim3)
agg_dat.handle_sparse_binning(dim3=dim3, verbose=False)
force_plane_dict = agg_dat.get_vector_force_plane(plot_resp=(0,2), fig_ind=1, \
plot=True, show=False, \
sign=[1.0, 1.0, 1.0], dim3=dim3, \
keyscale=plot_keyscale)
