def test_is_authenticated_token(self, mock_config_file_with_auth):
"""test checking if the user is authenticated via a token"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Don't check at_hash claim due to password grant not setting it in the token
mgr.validate_at_hash_claim = False
# Invalid with no token
assert mgr.is_authenticated() is False
assert mgr.is_authenticated(None) is False
assert mgr.is_authenticated("asdfasdfa") is False
assert mgr.is_authenticated("asdfasdfa", "asdfasdffdgfgh") is False
assert mgr.is_authenticated(
mock_config_file_with_auth[1]['access_token'],
mock_config_file_with_auth[1]['id_token']) is True
# Second access should load from disk and not need a token
mgr2 = get_identity_manager(config)
assert mgr2.is_authenticated() is True
assert mgr2.is_authenticated(
"asdfasdfa") is True # An "expired" token will essentially do this
# Double check logging out un-authenticates
mgr2.logout()
assert mgr.is_authenticated() is False
assert mgr2.is_authenticated() is False
clean_local_cache(mgr)
def test_get_user_profile(self, mock_config_file_with_auth_browser):
"""test getting a user profile from Auth0"""
config = Configuration(mock_config_file_with_auth_browser[0])
mgr = get_identity_manager(config)
assert type(mgr) == BrowserIdentityManager
# Don't check at_hash claim due to password grant not setting it in the token
mgr.validate_at_hash_claim = False
# Load User
with pytest.raises(AuthenticationError):
# Should fail without a token
mgr.get_user_profile()
# Load User
u = mgr.get_user_profile(mock_config_file_with_auth_browser[2]['access_token'],
mock_config_file_with_auth_browser[2]['id_token'])
assert type(u) == User
assert u.username == "johndoe"
assert u.email == "*****@*****.**"
assert u.given_name == "John"
assert u.family_name == "Doe"
# Second access should fail since not cached
mgr2 = get_identity_manager(config)
with pytest.raises(AuthenticationError):
# Should fail without a token
mgr2.get_user_profile()
def test_authenticate_user_exists_token(self, mock_config_file_with_auth):
"""test getting a user after stored locally already"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Save User
assert os.path.exists(os.path.join(mgr.auth_dir,
'cached_id_jwt')) is False
mgr._safe_cached_id_access(mock_config_file_with_auth[1]['id_token'])
assert os.path.exists(os.path.join(mgr.auth_dir,
'cached_id_jwt')) is True
# Load User
u2 = mgr.get_user_profile(
mock_config_file_with_auth[1]['access_token'],
mock_config_file_with_auth[1]['id_token'])
assert type(u2) == User
assert "johndoe" == u2.username
assert "*****@*****.**" == u2.email
assert "John" == u2.given_name
assert "Doe" == u2.family_name
clean_local_cache(mgr)
def test_load_user_refresh(self, mock_config_file_with_auth):
"""handling a new token for the same user"""
config = Configuration(mock_config_file_with_auth[0])
with mock.patch.object(jose.jwt, 'get_unverified_claims', lambda x: mock_jwt_claims(x)):
with mock.patch.object(LocalIdentityManager, 'validate_jwt_token', mock_jwt_validate):
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Save User
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
mgr._safe_cached_id_access(json.dumps({'nickname': 'testuser', 'dummy': '1'}))
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is True
with open(os.path.join(mgr.auth_dir, 'cached_id_jwt'), 'rt') as cf:
data = json.loads(json.load(cf))
assert data['dummy'] == '1'
# Load User
u2 = mgr._load_user(json.dumps({'nickname': 'testuser', 'dummy': '2'}))
assert type(u2) == User
assert "testuser" == u2.username
assert "*****@*****.**" == u2.email
assert "test" == u2.given_name
assert "user" == u2.family_name
with open(os.path.join(mgr.auth_dir, 'cached_id_jwt'), 'rt') as cf:
data = json.loads(json.load(cf))
assert data['dummy'] == '2'
clean_local_cache(mgr)
def test_get_profile_attribute(self, mock_config_file_with_auth):
"""test getting profile attributes safely from the profile dictionary"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
profile_data = {"username": "", "email": "*****@*****.**"}
assert mgr._get_profile_attribute(profile_data,
"email") == "*****@*****.**"
assert mgr._get_profile_attribute(profile_data, "email",
False) == "*****@*****.**"
assert mgr._get_profile_attribute(profile_data, "username",
False) is None
with pytest.raises(AuthenticationError):
mgr._get_profile_attribute(profile_data, "username")
with pytest.raises(AuthenticationError):
mgr._get_profile_attribute(profile_data, "username", True)
with pytest.raises(AuthenticationError):
mgr._get_profile_attribute(profile_data, "first_name")
assert mgr._get_profile_attribute(profile_data, "first_name",
False) is None
clean_local_cache(mgr)
def fixture_working_dir_lfs_disabled():
"""A pytest fixture that creates a temporary working directory, config file, schema, and local user identity
"""
# Create temp dir
config_file, temp_dir = _create_temp_work_dir(lfs_enabled=False)
# Create user identity
insert_cached_identity(temp_dir)
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
# Load User identity into app context
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app. Set current usert explicitly(this is done in the middleware)
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
# Create a test client
client = Client(schema,
middleware=[DataloaderMiddleware()],
context_value=ContextMock())
yield config_file, temp_dir, client, schema # name of the config file, temporary working directory, the schema
# Remove the temp_dir
shutil.rmtree(temp_dir)
def test_load_user_mismatch(self, mock_config_file_with_auth):
"""handling a new token for the same user"""
config = Configuration(mock_config_file_with_auth[0])
with mock.patch.object(jose.jwt, 'get_unverified_claims',
lambda x: mock_jwt_claims(x)):
with mock.patch.object(LocalIdentityManager, 'validate_jwt_token',
mock_jwt_validate):
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Save User
assert os.path.exists(
os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
mgr._safe_cached_id_access(
json.dumps({
'nickname': 'olduser',
'dummy': '1'
}))
assert os.path.exists(
os.path.join(mgr.auth_dir, 'cached_id_jwt')) is True
# Load User
u2 = mgr._load_user(
json.dumps({
'nickname': 'testuser',
'dummy': '1'
}))
assert os.path.exists(
os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
clean_local_cache(mgr)
def test_check_first_login_no_user_locally_no_repo(
self, mock_import, mock_config_file_with_auth_first_login,
cleanup_auto_import):
"""Test login with the user in the repo alread"""
# Add mock for call to auth service
responses.add(responses.GET,
'https://usersrv.gigantum.io/user',
json={'exists': False},
status=404)
responses.add(responses.POST,
'https://usersrv.gigantum.io/user',
status=201)
config = Configuration(mock_config_file_with_auth_first_login[0])
mgr = get_identity_manager(config)
# Don't check at_hash claim due to password grant not setting it in the token
mgr.validate_at_hash_claim = False
mgr._check_first_login(
"johndoe",
access_token=mock_config_file_with_auth_first_login[2]
['access_token'])
# Should import labbook - note we aren't mocking all the way to the workers
time.sleep(5)
assert os.path.exists(
os.path.join('/mnt', 'gigantum', "johndoe", "johndoe", "labbooks",
"my-first-project")) is True
def mock_create_labbooks(fixture_working_dir):
# Create a labbook in the temporary directory
config_file = fixture_working_dir[0]
im = InventoryManager(fixture_working_dir[0])
lb = im.create_labbook(UT_USERNAME,
UT_USERNAME,
UT_LBNAME,
description="Cats labbook 1")
# Create a file in the dir
with open(os.path.join(fixture_working_dir[1], 'unittest-examplefile'),
'w') as sf:
sf.write("test data")
sf.seek(0)
FileOperations.insert_file(lb, 'code', sf.name)
assert os.path.isfile(
os.path.join(lb.root_dir, 'code', 'unittest-examplefile'))
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
client = Client(
schema,
middleware=[DataloaderMiddleware(), error_middleware],
context_value=ContextMock())
yield lb, client, schema
shutil.rmtree(fixture_working_dir, ignore_errors=True)
def test_get_user_profile(self, mock_config_file_with_auth):
"""test getting a user profile from Auth0"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Don't check at_hash claim due to password grant not setting it in the token
mgr.validate_at_hash_claim = False
# Load User
with pytest.raises(AuthenticationError):
# Should fail without a token
mgr.get_user_profile()
# Load User
u = mgr.get_user_profile(mock_config_file_with_auth[1]['access_token'],
mock_config_file_with_auth[1]['id_token'])
assert type(u) == User
assert os.path.exists(os.path.join(mgr.auth_dir,
'cached_id_jwt')) is True
assert u.username == "johndoe"
assert u.email == "*****@*****.**"
assert u.given_name == "John"
assert u.family_name == "Doe"
# Seccond access should load from disk and not need a token
mgr2 = get_identity_manager(config)
u2 = mgr2.get_user_profile()
assert type(u) == User
assert os.path.exists(os.path.join(mgr.auth_dir,
'cached_id_jwt')) is True
assert u2.username == "johndoe"
assert u2.email == "*****@*****.**"
assert u2.given_name == "John"
assert u2.family_name == "Doe"
# Double check logging out un-authenticates
mgr2.logout()
with pytest.raises(AuthenticationError):
# Should fail without a token
mgr.get_user_profile()
with pytest.raises(AuthenticationError):
# Should fail without a token
mgr2.get_user_profile()
clean_local_cache(mgr)
def fixture_single_dataset():
"""A pytest fixture that creates a temporary working directory, a config file to match, creates the schema,
and populates the environment component repository.
Class scope modifier attached
"""
# Create temp dir
config_file, temp_dir = _create_temp_work_dir()
# Create user identity
insert_cached_identity(temp_dir)
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
# Create a bunch of lab books
im = InventoryManager(config_file)
ds = im.create_dataset('default',
'default',
"test-dataset",
storage_type="gigantum_object_v1",
description="Cats 2")
m = Manifest(ds, 'default')
cm_class = get_cache_manager_class(ds.client_config)
cache_mgr = cm_class(ds, 'default')
revision = ds.git.repo.head.commit.hexsha
os.makedirs(os.path.join(cache_mgr.cache_root, revision, "other_dir"))
helper_append_file(cache_mgr.cache_root, revision, "test1.txt", "asdfasdf")
helper_append_file(cache_mgr.cache_root, revision, "test2.txt", "rtg")
helper_append_file(cache_mgr.cache_root, revision, "test3.txt", "wer")
helper_append_file(cache_mgr.cache_root, revision, "other_dir/test4.txt",
"dfasdfhfgjhg")
helper_append_file(cache_mgr.cache_root, revision, "other_dir/test5.txt",
"fdghdfgsa")
m.update()
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
# Load User identity into app context
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app. Set current user explicitly (this is done in the middleware)
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
# Create a test client
client = Client(schema,
middleware=[DataloaderMiddleware()],
context_value=ContextMock())
yield config_file, temp_dir, client, ds, cache_mgr
# Remove the temp_dir
shutil.rmtree(temp_dir)
def test_is_authenticated_token(self, mock_config_file_with_auth_browser):
"""test checking if the user is authenticated via a token"""
# TODO: Possibly move to integration tests or fully mock since this makes a call out to Auth0
config = Configuration(mock_config_file_with_auth_browser[0])
mgr = get_identity_manager(config)
assert type(mgr) == BrowserIdentityManager
# Invalid with no token
assert mgr.is_authenticated() is False
assert mgr.is_authenticated(None) is False
assert mgr.is_authenticated("asdfasdfa") is False
assert mgr.is_authenticated(mock_config_file_with_auth_browser[2]['access_token']) is True
# Second access should fail since not cached
mgr2 = get_identity_manager(config)
assert mgr2.is_authenticated() is False
assert mgr2.is_authenticated("asdfasdfa") is False # An "expired" token will essentially do this
def test_load_user_no_user(self, mock_config_file_with_auth):
"""test getting an identity manager"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Load User
assert mgr._load_user(None) is None
clean_local_cache(mgr)
def test_get_identity_manager(self, mock_config_file_with_auth):
"""test getting an identity manager"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
assert mgr.config == config
assert mgr.auth_dir == os.path.join(mock_config_file_with_auth[2], '.labmanager', 'identity')
assert mgr.user is None
assert mgr.rsa_key is None
assert mgr._user is None
def test_is_session_valid(self, mock_config_file_with_auth_browser):
"""test check for valid session"""
config = Configuration(mock_config_file_with_auth_browser[0])
mgr = get_identity_manager(config)
assert type(mgr) == BrowserIdentityManager
# Invalid with no token
assert mgr.is_token_valid() is False
assert mgr.is_token_valid(None) is False
assert mgr.is_token_valid("asdfasdfasdf") is False
assert mgr.is_token_valid(mock_config_file_with_auth_browser[2]['access_token']) is True
assert mgr.rsa_key is not None
def test_check_first_login_user_locally(self, mock_config_file_with_auth_first_login,
cleanup_auto_import):
"""Test login, but the user already logged into this instance"""
# fake the user already existing by creating the user directory
working_dir = mock_config_file_with_auth_first_login[1]
os.makedirs(os.path.join(working_dir, "johndoe"))
config = Configuration(mock_config_file_with_auth_first_login[0])
mgr = get_identity_manager(config)
mgr._check_first_login("johndoe", access_token=mock_config_file_with_auth_first_login[2]['access_token'])
# Should not import labbook - note we aren't mocking all the way to the workers
time.sleep(5)
assert os.path.exists(os.path.join('/mnt', 'gigantum', "johndoe", "johndoe", "labbooks",
"awful-intersections-demo")) is False
def test_check_first_login_errors(self, mock_config_file_with_auth_first_login,
cleanup_auto_import):
"""Test login, but the user already logged into this instance"""
# fake the user already existing by creating the user directory
working_dir = mock_config_file_with_auth_first_login[1]
os.makedirs(os.path.join(working_dir, "johndoe"))
config = Configuration(mock_config_file_with_auth_first_login[0])
mgr = get_identity_manager(config)
with pytest.raises(ValueError):
mgr._check_first_login("", "")
with pytest.raises(ValueError):
mgr._check_first_login("johndoe", "")
with pytest.raises(ValueError):
mgr._check_first_login("", "asdf")
def test_load_corrupt(self, mock_config_file_with_auth):
"""handling a corrupted cached id token"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
os.makedirs(mgr.auth_dir, exist_ok=True)
with open(os.path.join(mgr.auth_dir, 'cached_id_jwt'), 'wt') as cf:
cf.write('"sdfsd"df"')
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is True
# Load User
with pytest.raises(json.decoder.JSONDecodeError):
mgr._load_user(None)
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
clean_local_cache(mgr)
def fixture_working_dir_env_repo_scoped():
"""A pytest fixture that creates a temporary working directory, a config file to match, creates the schema,
and populates the environment component repository.
Class scope modifier attached
"""
# Create temp dir
config_file, temp_dir = _create_temp_work_dir()
# Create user identity
insert_cached_identity(temp_dir)
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
# get environment data and index
erm = RepositoryManager(config_file)
erm.update_repositories()
erm.index_repositories()
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
# Load User identity into app context
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app. Set current user explicitly (this is done in the middleware)
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
# Create a test client
client = Client(
schema,
middleware=[DataloaderMiddleware(), error_middleware],
context_value=ContextMock())
# name of the config file, temporary working directory, the schema
yield config_file, temp_dir, client, schema
# Remove the temp_dir
shutil.rmtree(temp_dir)
def test_logout_user(self, mock_config_file_with_auth):
"""test getting an identity manager"""
config = Configuration(mock_config_file_with_auth[0])
mgr = get_identity_manager(config)
assert type(mgr) == LocalIdentityManager
# Save User
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
mgr._safe_cached_id_access(mock_config_file_with_auth[1]['id_token'])
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is True
assert os.path.exists(os.path.join(mgr.auth_dir, 'jwks.json')) is True
# Load User
mgr.logout()
assert os.path.exists(os.path.join(mgr.auth_dir, 'cached_id_jwt')) is False
assert os.path.exists(os.path.join(mgr.auth_dir, 'jwks.json')) is False
assert mgr.user is None
assert mgr.rsa_key is None
assert mgr._load_user(None) is None
clean_local_cache(mgr)
def fixture_working_dir_with_cached_user():
"""A pytest fixture that creates a temporary working directory, config file, schema, and local user identity
"""
# Create temp dir
config_file, temp_dir = _create_temp_work_dir()
insert_cached_identity(temp_dir)
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
app = Flask("lmsrvlabbook")
# Load configuration class into the flask application
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app.
yield config_file, temp_dir # name of the config file, temporary working directory
# Remove the temp_dir
shutil.rmtree(temp_dir)
def test_get_identity_manager_errors(self, mock_config_file_with_auth):
"""Testing get_identity_manager error handling"""
config = Configuration(mock_config_file_with_auth[0])
config.config['auth']['identity_manager'] = "asdfasdf"
with pytest.raises(ValueError):
get_identity_manager(config)
del config.config['auth']['identity_manager']
with pytest.raises(ValueError):
get_identity_manager(config)
del config.config['auth']
with pytest.raises(ValueError):
get_identity_manager(config)
logger.info(f"Using custom user configuration from {user_conf_path}")
try:
with open(user_conf_path) as user_file:
yaml.safe_load(user_file)
shutil.copyfile(user_conf_path, os.path.expanduser("~/user-config.yaml"))
except Exception as e:
logger.error("Error parsing user config, cannot proceed")
raise
else:
logger.info("No custom user configuration found")
random_bytes = os.urandom(32)
app.config["SECRET_KEY"] = base64.b64encode(random_bytes).decode('utf-8')
app.config["LABMGR_CONFIG"] = config = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
if config.config["flask"]["allow_cors"]:
# Allow CORS
CORS(app, max_age=7200)
# Set Debug mode
app.config['DEBUG'] = config.config["flask"]["DEBUG"]
# Register LabBook service
app.register_blueprint(blueprint.complete_labbook_service)
# Configure CHP
try:
api_prefix = app.config["LABMGR_CONFIG"].config['proxy']["labmanager_api_prefix"]
apparent_proxy_port = app.config["LABMGR_CONFIG"].config['proxy']["apparent_proxy_port"]
def fixture_working_dir_dataset_populated_scoped():
"""A pytest fixture that creates a temporary working directory, a config file to match, creates the schema,
and populates the environment component repository.
Class scope modifier attached
"""
# Create temp dir
config_file, temp_dir = _create_temp_work_dir()
# Create user identity
insert_cached_identity(temp_dir)
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
# Create a bunch of lab books
im = InventoryManager(config_file)
im.create_dataset('default',
'default',
"dataset2",
storage_type="gigantum_object_v1",
description="Cats 2")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset3",
storage_type="gigantum_object_v1",
description="Cats 3")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset4",
storage_type="gigantum_object_v1",
description="Cats 4")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset5",
storage_type="gigantum_object_v1",
description="Cats 5")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset6",
storage_type="gigantum_object_v1",
description="Cats 6")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset7",
storage_type="gigantum_object_v1",
description="Cats 7")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset8",
storage_type="gigantum_object_v1",
description="Cats 8")
time.sleep(1.1)
im.create_dataset('default',
'default',
"dataset9",
storage_type="gigantum_object_v1",
description="Cats 9")
time.sleep(1.1)
im.create_dataset('default',
'test3',
"dataset-other",
storage_type="gigantum_object_v1",
description="Cats other")
time.sleep(1.1)
im.create_labbook('test3',
'test3',
"labbook-0",
description="This should not show up.")
im.create_dataset('default',
'default',
"dataset1",
storage_type="gigantum_object_v1",
description="Cats 1")
time.sleep(1.1)
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
# Load User identity into app context
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app. Set current user explicitly (this is done in the middleware)
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
# Create a test client
client = Client(schema,
middleware=[DataloaderMiddleware()],
context_value=ContextMock())
yield config_file, temp_dir, client, schema
# Remove the temp_dir
shutil.rmtree(temp_dir)
def build_image_for_jupyterlab():
# Create temp dir
config_file, temp_dir = _create_temp_work_dir()
# Create user identity
insert_cached_identity(temp_dir)
# Create test client
schema = graphene.Schema(query=LabbookQuery, mutation=LabbookMutations)
# get environment data and index
erm = RepositoryManager(config_file)
erm.update_repositories()
erm.index_repositories()
with patch.object(Configuration, 'find_default_config',
lambda self: config_file):
# Load User identity into app context
app = Flask("lmsrvlabbook")
app.config["LABMGR_CONFIG"] = Configuration()
app.config["LABMGR_ID_MGR"] = get_identity_manager(Configuration())
with app.app_context():
# within this block, current_app points to app. Set current user explicitly (this is done in the middleware)
flask.g.user_obj = app.config["LABMGR_ID_MGR"].get_user_profile()
# Create a test client
client = Client(
schema,
middleware=[DataloaderMiddleware(), error_middleware],
context_value=ContextMock())
# Create a labook
im = InventoryManager(config_file)
lb = im.create_labbook('default',
'unittester',
"containerunittestbook",
description="Testing docker building.")
cm = ComponentManager(lb)
cm.add_base(ENV_UNIT_TEST_REPO, ENV_UNIT_TEST_BASE,
ENV_UNIT_TEST_REV)
cm.add_packages("pip3", [{
"manager": "pip3",
"package": "requests",
"version": "2.18.4"
}])
bam = BundledAppManager(lb)
bam.add_bundled_app(9999, 'share', 'A bundled app for testing',
"cd /mnt; python3 -m http.server 9999")
ib = ImageBuilder(lb)
ib.assemble_dockerfile(write=True)
docker_client = get_docker_client()
try:
lb, docker_image_id = ContainerOperations.build_image(
labbook=lb, username="******")
# Note: The final field is the owner
yield lb, ib, docker_client, docker_image_id, client, "unittester"
finally:
try:
docker_client.containers.get(docker_image_id).stop()
docker_client.containers.get(docker_image_id).remove()
except:
pass
try:
docker_client.images.remove(docker_image_id,
force=True,
noprune=False)
except:
pass
shutil.rmtree(lb.root_dir)