def test_get_file_system_data_child_is_sbml(cls):
with tempfile.TemporaryDirectory() as tempdir:
test_path = os.path.join(tempdir, "parent_dir")
os.mkdir(test_path)
test_file_path = os.path.join(test_path, "test_file.sbml")
Path(test_file_path).touch()
with unittest.mock.patch("handlers.util.ls.build_child") as mock_build_child:
ls.get_file_system_data(test_path, tempdir)
mock_build_child.assert_called_once_with\
(text="test_file.sbml", f_type="sbml-model", p_path=tempdir)
def test_get_file_system_data_child_is_exp(cls):
with tempfile.TemporaryDirectory() as tempdir:
test_path = os.path.join(tempdir, "parent_dir")
os.mkdir(test_path)
test_dir_path = os.path.join(test_path, "test_dir.wkgp")
os.mkdir(test_dir_path)
with unittest.mock.patch("handlers.util.ls.build_child") as mock_build_child:
ls.get_file_system_data(test_path, tempdir)
mock_build_child.assert_called_once_with\
(text="test_dir.wkgp", f_type="workflow-group", p_path=tempdir)
def test_get_file_system_data_no_children(cls):
with tempfile.TemporaryDirectory() as tempdir:
test_path = os.path.join(tempdir, "empty_dir")
os.mkdir(test_path)
children = ls.get_file_system_data(test_path, tempdir)
assert len(children) == 0
def test_get_file_system_data_dir_not_found(self):
with tempfile.TemporaryDirectory() as tempdir:
test_path = os.path.join(tempdir, "nonexistent_dir")
with self.assertRaises(StochSSFileNotFoundError):
ls.get_file_system_data(test_path, tempdir)