def test_plot_mesh3d():
mesh = Mesh()
mesh.load(domain_mesh)
mesh.refine_all_elements()
mesh.refine_all_elements()
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="orders", show=False)
def test_plot_mesh1b():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="orders", show=False)
plot_mesh_mpl(mesh.nodes, mesh.elements)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
def test_plot_mesh3d():
mesh = Mesh()
mesh.load(domain_mesh)
mesh.refine_all_elements()
mesh.refine_all_elements()
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="orders", show=False)
def test_plot_mesh1b():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="orders", show=False)
plot_mesh_mpl(mesh.nodes, mesh.elements)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
def test_plot_mesh1a():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="simple", show=False)
plot_mesh_mpl_simple(mesh.nodes, mesh.elements)
plot_mesh_mpl_simple(mesh.nodes_dict, mesh.elements)
plot_mesh_mpl_simple(mesh.nodes, mesh.elements, plot_nodes=False)
plot_mesh_mpl_simple(mesh.nodes_dict, mesh.elements, plot_nodes=False)
def test_plot_mesh2():
mesh = Mesh()
mesh.load(domain_mesh)
mesh.refine_element(0)
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="simple", show=False)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements, plot_nodes=False)
view.show(mesh, lib="mpl", method="orders", show=False)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
def test_plot_mesh1c():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
assert raises(
ValueError,
'view.show(mesh, lib="mpl", method="something_unknown_123")')
def test_plot_mesh2():
mesh = Mesh()
mesh.load(domain_mesh)
mesh.refine_element(0)
view = MeshView("Solution")
view.show(mesh, lib="mpl", method="simple", show=False)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements, plot_nodes=False)
view.show(mesh, lib="mpl", method="orders", show=False)
plot_mesh_mpl(mesh.nodes_dict, mesh.elements)
def calc(threshold=0.3,
strategy=0,
h_only=False,
error_tol=1,
interactive_plotting=False,
show_mesh=False,
show_graph=True):
mesh = Mesh()
mesh.create([
[0, 0],
[1, 0],
[1, 1],
[0, 1],
], [
[2, 3, 0, 1, 0],
], [
[0, 1, 1],
[1, 2, 1],
[2, 3, 1],
[3, 0, 1],
], [])
mesh.refine_all_elements()
shapeset = H1Shapeset()
pss = PrecalcShapeset(shapeset)
space = H1Space(mesh, shapeset)
set_bc(space)
space.set_uniform_order(1)
wf = WeakForm(1)
set_forms(wf)
sln = Solution()
rsln = Solution()
solver = DummySolver()
selector = H1ProjBasedSelector(CandList.HP_ANISO, 1.0, -1, shapeset)
view = ScalarView("Solution")
iter = 0
graph = []
while 1:
space.assign_dofs()
sys = LinSystem(wf, solver)
sys.set_spaces(space)
sys.set_pss(pss)
sys.assemble()
sys.solve_system(sln)
dofs = sys.get_matrix().shape[0]
if interactive_plotting:
view.show(sln,
lib=lib,
notebook=True,
filename="a%02d.png" % iter)
rsys = RefSystem(sys)
rsys.assemble()
rsys.solve_system(rsln)
hp = H1Adapt([space])
hp.set_solutions([sln], [rsln])
err_est = hp.calc_error() * 100
err_est = hp.calc_error(sln, rsln) * 100
print "iter=%02d, err_est=%5.2f%%, DOFS=%d" % (iter, err_est, dofs)
graph.append([dofs, err_est])
if err_est < error_tol:
break
hp.adapt(selector, threshold, strategy)
iter += 1
if not interactive_plotting:
view.show(sln, lib=lib, notebook=True)
if show_mesh:
mview = MeshView("Mesh")
mview.show(mesh, lib="mpl", notebook=True, filename="b.png")
if show_graph:
from numpy import array
graph = array(graph)
import pylab
pylab.clf()
pylab.plot(graph[:, 0], graph[:, 1], "ko", label="error estimate")
pylab.plot(graph[:, 0], graph[:, 1], "k-")
pylab.title("Error Convergence for the Inner Layer Problem")
pylab.legend()
pylab.xlabel("Degrees of Freedom")
pylab.ylabel("Error [%]")
pylab.yscale("log")
pylab.grid()
pylab.savefig("graph.png")
], [])
# Perform initial mesh refinements
mesh.refine_all_elements()
# Create an H1 space with default shapeset
space = H1Space(mesh, P_INIT)
set_bc(space)
# Initialize the weak formulation
wf = WeakForm()
set_forms(wf)
# Initialize views
sview = ScalarView("Solution")
mview = MeshView("Mesh")
graph = []
# Initialize refinement selector
selector = H1ProjBasedSelector(CAND_LIST, CONV_EXP, H2DRS_DEFAULT_ORDER)
# Initialize the coarse mesh problem
ls = LinSystem(wf)
ls.set_spaces(space)
# Adaptivity loop
iter = 0
done = False
print "Calculating..."
sln_coarse = Solution()
sln_fine = Solution()
#! /usr/bin/env python """ Displays a mesh file. Usage: ./show_mesh.py file.mesh """ from hermes2d import Mesh, MeshView import sys filename = sys.argv[1] mesh = Mesh() mesh.load(filename) mview = MeshView(filename, 100, 100, 500, 500) mview.show(mesh, lib="mpl", method="orders")
# Create finite element space
space = H1Space(mesh, shapeset)
set_bc(space)
space.set_uniform_order(P_INIT)
# Enumerate basis functions
space.assign_dofs()
# Initialize the weak formulation
wf = WeakForm(1)
set_forms(wf)
# Visualize solution and mesh
sview = ScalarView("Coarse solution", 0, 0, 600, 1000)
oview = OrderView("Polynomial orders", 1220, 0, 600, 1000)
mview = MeshView("Example 12", 100, 100, 500, 500)
# Matrix solver
solver = DummySolver()
# Adaptivity loop
it = 0
ndofs = 0
done = False
sln_coarse = Solution()
sln_fine = Solution()
while (not done):
print("\n---- Adaptivity step %d ---------------------------------------------\n" % (it+1))
it += 1
#! /usr/bin/env python """ Displays a mesh file. Usage: ./show_mesh.py file.mesh """ from hermes2d import Mesh, MeshView import sys filename = sys.argv[1] mesh = Mesh() mesh.load(filename) mview = MeshView(filename, 100, 100, 500, 500) mview.show(mesh)
def test_plot_mesh4():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
view.show(mesh, lib="mpl", show=False, method="orders")
def calc(
threshold=0.3,
strategy=0,
h_only=False,
error_tol=1,
interactive_plotting=False,
show_mesh=False,
show_graph=True,
):
mesh = Mesh()
mesh.create(
[[0, 0], [1, 0], [1, 1], [0, 1]], [[2, 3, 0, 1, 0]], [[0, 1, 1], [1, 2, 1], [2, 3, 1], [3, 0, 1]], []
)
mesh.refine_all_elements()
shapeset = H1Shapeset()
pss = PrecalcShapeset(shapeset)
space = H1Space(mesh, shapeset)
set_bc(space)
space.set_uniform_order(1)
wf = WeakForm(1)
set_forms(wf)
sln = Solution()
rsln = Solution()
solver = DummySolver()
selector = H1ProjBasedSelector(CandList.HP_ANISO, 1.0, -1, shapeset)
view = ScalarView("Solution")
iter = 0
graph = []
while 1:
space.assign_dofs()
sys = LinSystem(wf, solver)
sys.set_spaces(space)
sys.set_pss(pss)
sys.assemble()
sys.solve_system(sln)
dofs = sys.get_matrix().shape[0]
if interactive_plotting:
view.show(sln, lib=lib, notebook=True, filename="a%02d.png" % iter)
rsys = RefSystem(sys)
rsys.assemble()
rsys.solve_system(rsln)
hp = H1Adapt([space])
hp.set_solutions([sln], [rsln])
err_est = hp.calc_error() * 100
err_est = hp.calc_error(sln, rsln) * 100
print "iter=%02d, err_est=%5.2f%%, DOFS=%d" % (iter, err_est, dofs)
graph.append([dofs, err_est])
if err_est < error_tol:
break
hp.adapt(selector, threshold, strategy)
iter += 1
if not interactive_plotting:
view.show(sln, lib=lib, notebook=True)
if show_mesh:
mview = MeshView("Mesh")
mview.show(mesh, lib="mpl", notebook=True, filename="b.png")
if show_graph:
from numpy import array
graph = array(graph)
import pylab
pylab.clf()
pylab.plot(graph[:, 0], graph[:, 1], "ko", label="error estimate")
pylab.plot(graph[:, 0], graph[:, 1], "k-")
pylab.title("Error Convergence for the Inner Layer Problem")
pylab.legend()
pylab.xlabel("Degrees of Freedom")
pylab.ylabel("Error [%]")
pylab.yscale("log")
pylab.grid()
pylab.savefig("graph.png")
# Matrix solver
solver = DummySolver()
# adaptivity loop
it = 1
done = False
cpu = 0.0
x_sln_coarse = Solution()
y_sln_coarse = Solution()
x_sln_fine = Solution()
y_sln_fine = Solution()
xomview = MeshView()
yomview = MeshView()
while(not done):
print ("\n---- Adaptivity step %d ---------------------------------------------\n" % it)
it += 1
# Calculating the number of degrees of freedom
ndofs = xdisp.assign_dofs()
ndofs += ydisp.assign_dofs(ndofs)
print("xdof=%d, ydof=%d\n" % (xdisp.get_num_dofs(), ydisp.get_num_dofs()) )
# Solve the coarse mesh problem
ls = LinSystem(wf, solver)
ls.set_spaces(xdisp, ydisp)
shapeset = H1Shapeset()
pss = PrecalcShapeset(shapeset)
space = H1Space(mesh, shapeset)
set_bc(space)
space.set_uniform_order(1)
wf = WeakForm(1)
set_forms(wf)
sln = Solution()
rsln = Solution()
solver = DummySolver()
view = ScalarView("Solution")
mview = MeshView("Mesh")
graph = []
iter = 0
print "Calculating..."
while 1:
space.assign_dofs()
sys = LinSystem(wf, solver)
sys.set_spaces(space)
sys.set_pss(pss)
sys.assemble()
sys.solve_system(sln)
dofs = sys.get_matrix().shape[0]
if interactive_plotting:
view.show(sln, lib="mayavi", filename="a%02d.png" % iter)
def test_plot_mesh4():
mesh = Mesh()
mesh.load(domain_mesh)
view = MeshView("Solution")
view.show(mesh, lib="mpl", show=False, method="orders")
#! /usr/bin/env python
from hermes2d import Mesh, MeshView
from hermes2d.examples import get_example_mesh
domain_mesh = get_example_mesh()
mesh = Mesh()
mesh.load(domain_mesh)
#mesh.refine_element(2)
#mesh.refine_all_elements()
#mesh.refine_all_elements()
#mesh.refine_all_elements()
mview = MeshView("Hello world!", 100, 100, 500, 500)
mview.show(mesh, lib="mpl", method="orders", notebook=False)
mview.wait()
#! /usr/bin/env python """ Displays a mesh file. Usage: ./show_mesh.py file.mesh """ from hermes2d import Mesh, MeshView import sys filename = sys.argv[1] mesh = Mesh() mesh.load(filename) mview = MeshView(filename, 100, 100, 500, 500) mview.show(mesh, lib="mpl", method="orders")
