Exemplo n.º 1
0
def parse_component(text, name=None, datatype='ST', version=None, encoding_chars=None,
                    validation_level=None, reference=None):
    """
    Parse the given ER7-encoded component and return an instance of
    :class:`Component <hl7apy.core.Component>`.

    :type text: ``str``
    :param text: the ER7-encoded string containing the components to be parsed

    :type name: ``str``
    :param name: the component's name (e.g. XPN_2)

    :type datatype: ``str``
    :param datatype: the datatype of the component (e.g. ST)

    :type version: ``str``
    :param version: the HL7 version (e.g. "2.5"), or ``None`` to use the default
        (see :func:`set_default_version <hl7apy.set_default_version>`)

    :type encoding_chars: ``dict``
    :param encoding_chars: a dictionary containing the encoding chars or None to use the default
        (see :func:`set_default_encoding_chars <hl7apy.set_default_encoding_chars>`)

    :type validation_level: ``int``
    :param validation_level: the validation level. Possible values are those defined in
        :class:`VALIDATION_LEVEL <hl7apy.consts.VALIDATION_LEVEL>` class or ``None`` to use the default
        validation level (see :func:`set_default_validation_level <hl7apy.set_default_validation_level>`)

    :type reference: ``dict``
    :param reference: a dictionary containing the element structure returned by
        :func:`load_reference <hl7apy.load_reference>` or :func:`find_reference <hl7apy.find_reference>`
        or belonging to a message profile

    :return: an instance of :class:`Component <hl7apy.core.Component>`

    >>> component = "GATEWAY&1.3.6.1.4.1.21367.2011.2.5.17"
    >>> cx_4 = parse_component(component, name="CX_4")
    >>> print(cx_4)
    <Component CX_4 (ASSIGNING_AUTHORITY) of type None>
    >>> print(cx_4.to_er7())
    GATEWAY&1.3.6.1.4.1.21367.2011.2.5.17
    >>> print(parse_component(component))
    <Component ST (None) of type None>
    """
    version = _get_version(version)
    encoding_chars = _get_encoding_chars(encoding_chars)
    validation_level = _get_validation_level(validation_level)

    try:
        component = Component(name, datatype, version=version, validation_level=validation_level,
                              reference=reference)
    except InvalidName as e:
        if Validator.is_strict(validation_level):
            raise e
        component = Component(datatype, version=version, validation_level=validation_level,
                              reference=reference)
    children = parse_subcomponents(text, component.datatype, version, encoding_chars, validation_level)
    if Validator.is_tolerant(component.validation_level) and is_base_datatype(component.datatype, version) and \
            len(children) > 1:
        component.datatype = None
    component.children = children
    return component
Exemplo n.º 2
0
def parse_component(text, name=None, datatype='ST', version=None, encoding_chars=None,
                    validation_level=None, reference=None):
    """
    Parse the given ER7-encoded component and return an instance of
    :class:`Component <hl7apy.core.Component>`.

    :type text: ``str``
    :param text: the ER7-encoded string containing the components to be parsed

    :type name: ``str``
    :param name: the component's name (e.g. XPN_2)

    :type datatype: ``str``
    :param datatype: the datatype of the component (e.g. ST)

    :type version: ``str``
    :param version: the HL7 version (e.g. "2.5"), or ``None`` to use the default
        (see :func:`set_default_version <hl7apy.set_default_version>`)

    :type encoding_chars: ``dict``
    :param encoding_chars: a dictionary containing the encoding chars or None to use the default
        (see :func:`set_default_encoding_chars <hl7apy.set_default_encoding_chars>`)

    :type validation_level: ``int``
    :param validation_level: the validation level. Possible values are those defined in
        :class:`VALIDATION_LEVEL <hl7apy.consts.VALIDATION_LEVEL>` class or ``None`` to use the default
        validation level (see :func:`set_default_validation_level <hl7apy.set_default_validation_level>`)

    :type reference: ``dict``
    :param reference: a dictionary containing the element structure returned by
        :func:`load_reference <hl7apy.load_reference>` or :func:`find_reference <hl7apy.find_reference>`
        or belonging to a message profile

    :return: an instance of :class:`Component <hl7apy.core.Component>`

    >>> component = "GATEWAY&1.3.6.1.4.1.21367.2011.2.5.17"
    >>> cx_4 = parse_component(component, name="CX_4")
    >>> print(cx_4)
    <Component CX_4 (ASSIGNING_AUTHORITY) of type None>
    >>> print(cx_4.to_er7())
    GATEWAY&1.3.6.1.4.1.21367.2011.2.5.17
    >>> print(parse_component(component))
    <Component ST (None) of type None>
    """
    version = _get_version(version)
    encoding_chars = _get_encoding_chars(encoding_chars, version)
    validation_level = _get_validation_level(validation_level)

    try:
        component = Component(name, datatype, version=version, validation_level=validation_level,
                              reference=reference)
    except InvalidName as e:
        if Validator.is_strict(validation_level):
            raise e
        component = Component(datatype, version=version, validation_level=validation_level,
                              reference=reference)
    children = parse_subcomponents(text, component.datatype, version, encoding_chars, validation_level)
    if Validator.is_tolerant(component.validation_level) and is_base_datatype(component.datatype, version) and \
            len(children) > 1:
        component.datatype = None
    component.children = children
    return component
Exemplo n.º 3
0
def parse_field(text, name=None, version=None, encoding_chars=None, validation_level=None,
                reference=None, force_varies=False):
    """
    Parse the given ER7-encoded field and return an instance of :class:`Field <hl7apy.core.Field>`.

    :type text: ``str``
    :param text: the ER7-encoded string containing the fields to be parsed

    :type name: ``str``
    :param name: the field name (e.g. MSH_7)

    :type version: ``str``
    :param version: the HL7 version (e.g. "2.5"), or ``None`` to use the default
        (see :func:`set_default_version <hl7apy.set_default_version>`)

    :type encoding_chars: ``dict``
    :param encoding_chars: a dictionary containing the encoding chars or None to use the default
        (see :func:`set_default_encoding_chars <hl7apy.set_default_encoding_chars>`)

    :type validation_level: ``int``
    :param validation_level: the validation level. Possible values are those defined in
        :class:`VALIDATION_LEVEL <hl7apy.consts.VALIDATION_LEVEL>` class or ``None`` to use the default
        validation level (see :func:`set_default_validation_level <hl7apy.set_default_validation_level>`)

    :type reference: ``dict``
    :param reference: a dictionary containing the element structure returned by
        :func:`load_reference <hl7apy.load_reference>` or :func:`find_reference <hl7apy.find_reference>`
        or belonging to a message profile

    :type force_varies: ``boolean``
    :param force_varies: flag that force the fields to use a varies structure when no reference is found.
        It is used when a segment ends with a field of type varies that thus support infinite children

    :return: an instance of :class:`Field <hl7apy.core.Field>`

    >>> field = "NUCLEAR^NELDA^W"
    >>> nk1_2 = parse_field(field, name="NK1_2")
    >>> print(nk1_2)
    <Field NK1_2 (NAME) of type XPN>
    >>> print(nk1_2.to_er7())
    NUCLEAR^NELDA^W
    >>> unknown = parse_field(field)
    >>> print(unknown)
    <Field of type None>
    >>> print(unknown.to_er7())
    NUCLEAR^NELDA^W
    """
    version = _get_version(version)
    encoding_chars = _get_encoding_chars(encoding_chars)
    validation_level = _get_validation_level(validation_level)

    try:
        field = Field(name, version=version, validation_level=validation_level, reference=reference)
    except InvalidName:
        if force_varies:
            reference = ('leaf', 'varies', None, None)
            field = Field(name, version=version, validation_level=validation_level, reference=reference)
        else:
            field = Field(version=version, validation_level=validation_level, reference=reference)

    if name in ('MSH_1', 'MSH_2'):
        s = SubComponent(datatype='ST', value=text, validation_level=validation_level, version=version)
        c = Component(datatype='ST', validation_level=validation_level, version=version)
        c.add(s)
        field.add(c)
    else:
        children = parse_components(text, field.datatype, version, encoding_chars, validation_level,
                                    field.structure_by_name)
        if Validator.is_tolerant(validation_level) and is_base_datatype(field.datatype, version) and \
                len(children) > 1:
            field.datatype = None
        field.children = children
    return field
Exemplo n.º 4
0
def parse_field(text, name=None, version=None, encoding_chars=None, validation_level=None,
                reference=None, force_varies=False):
    """
    Parse the given ER7-encoded field and return an instance of :class:`Field <hl7apy.core.Field>`.

    :type text: ``str``
    :param text: the ER7-encoded string containing the fields to be parsed

    :type name: ``str``
    :param name: the field name (e.g. MSH_7)

    :type version: ``str``
    :param version: the HL7 version (e.g. "2.5"), or ``None`` to use the default
        (see :func:`set_default_version <hl7apy.set_default_version>`)

    :type encoding_chars: ``dict``
    :param encoding_chars: a dictionary containing the encoding chars or None to use the default
        (see :func:`set_default_encoding_chars <hl7apy.set_default_encoding_chars>`)

    :type validation_level: ``int``
    :param validation_level: the validation level. Possible values are those defined in
        :class:`VALIDATION_LEVEL <hl7apy.consts.VALIDATION_LEVEL>` class or ``None`` to use the default
        validation level (see :func:`set_default_validation_level <hl7apy.set_default_validation_level>`)

    :type reference: ``dict``
    :param reference: a dictionary containing the element structure returned by
        :func:`load_reference <hl7apy.load_reference>` or :func:`find_reference <hl7apy.find_reference>`
        or belonging to a message profile

    :type force_varies: ``boolean``
    :param force_varies: flag that force the fields to use a varies structure when no reference is found.
        It is used when a segment ends with a field of type varies that thus support infinite children

    :return: an instance of :class:`Field <hl7apy.core.Field>`

    >>> field = "NUCLEAR^NELDA^W"
    >>> nk1_2 = parse_field(field, name="NK1_2")
    >>> print(nk1_2)
    <Field NK1_2 (NAME) of type XPN>
    >>> print(nk1_2.to_er7())
    NUCLEAR^NELDA^W
    >>> unknown = parse_field(field)
    >>> print(unknown)
    <Field of type None>
    >>> print(unknown.to_er7())
    NUCLEAR^NELDA^W
    """
    version = _get_version(version)
    encoding_chars = _get_encoding_chars(encoding_chars, version)
    validation_level = _get_validation_level(validation_level)

    try:
        field = Field(name, version=version, validation_level=validation_level, reference=reference)
    except InvalidName:
        if force_varies:
            reference = ('leaf', None, 'varies', None, None, -1)
            field = Field(name, version=version, validation_level=validation_level, reference=reference)
        else:
            field = Field(version=version, validation_level=validation_level, reference=reference)

    if name in ('MSH_1', 'MSH_2'):
        s = SubComponent(datatype='ST', value=text, validation_level=validation_level, version=version)
        c = Component(datatype='ST', validation_level=validation_level, version=version)
        c.add(s)
        field.add(c)
    else:
        children = parse_components(text, field.datatype, version, encoding_chars, validation_level,
                                    field.structure_by_name)
        if Validator.is_tolerant(validation_level) and is_base_datatype(field.datatype, version) and \
                len(children) > 1:
            field.datatype = None
        field.children = children
    return field