Exemplo n.º 1
0
def process(sequence_file):
    header, sequence = utils.load(arguments['<fasta_sequence>'])
    gene_sequence = utils.to_codon_sequence(sequence)
    hmm = create_from_sequence(gene_sequence)
    print(json.dumps({'header': header, 'model': hmm.__dict__}, sort_keys=True, indent=4, separators=(',', ': ')))