Exemplos de SequenceRange.overlaps_with em Python

Exemplo n.º 1

Arquivo: test_range.py Projeto: cmbi/hommod

def test_overlaps_with():

    r1 = SequenceRange(0, 10, "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")
    r2 = SequenceRange(5, 15, "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")

    ok_(r1.overlaps_with(r2))

Exemplo n.º 2

Arquivo: test_range.py Projeto: cmbi/hommod

def test_not_overlaps_with():
    r1 = SequenceRange(0, 10, "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")
    r2 = SequenceRange(10, 20,
                       "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")

    ok_(not r1.overlaps_with(r2))

Exemplo n.º 3

Arquivo: test_range.py Projeto: cmbi/hommod-rest

def test_overlaps_with():

    r1 = SequenceRange(0, 10, "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")
    r2 = SequenceRange(5, 15, "AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")

    ok_(r1.overlaps_with(r2))