Exemplo n.º 1
0
def pfam_driver(sequence_id):
    print "Interpro driver::pfam_driver:: Creating and running Interpro-pfam object on sequence {0}".format(sequence_id)
    pfam = Interpro(sequence_id=sequence_id, results_dir=INTERPRO_DIR+"/pfam_results", appl_str="hmmpfam")
    try:
        pfam.run()
    except:
        print "Interpro-pfam run on sequence {0} failed".format(sequence_id)
        raise
Exemplo n.º 2
0
def interpro_driver(sequence_id):
    print "Interpro driver::interpro_driver:: Creating and running Interpro object on sequence {0}".format(sequence_id)
    ipr = Interpro(sequence_id=sequence_id, results_dir=INTERPRO_DIR+"/interpro_results")
    try:
        ipr.run()
    except:
        print "Interpro run on sequence {0} failed".format(sequence_id)
        raise