def objective(args):
sargs = arg_string(args)
w_kind = args['w_kind']
w_scale = args['w_scale']
eta = args['eta']
# eta = [args['eta0'], args['eta1'], args['eta2']]
max_cost = -np.inf
for _ in range(5):
f, df = static_f_df(tau_rc=0.05, **args['neuron_type'])
weights = initial_weights(sizes, kind=w_kind, scale=w_scale, rng=rng)
# weights = initial_weights(sizes, kind='ortho', rng=rng)
# lsuv(X, weights, f, target_input=True, target_std=1, verbose=1)
# lsuv(X[:100], weights, f, target_input=True, target_std=1, verbose=1)
# --- learners
network = Network(weights, f=f, df=df, biases=None)
# network = Network(weights, f=f, df=df, biases=None, noise=1.)
learner = Learner(network,
squared_cost,
rms_error,
eta=eta,
alpha=alpha,
momentum=momentum)
learner.train(1, batch_fn, verbose=0)
y = learner.network.predict(Xvalid)
mean_cost = rms(y - Yvalid, axis=1).mean()
max_cost = max(max_cost, mean_cost)
print("%s: %0.3e" % (sargs, max_cost))
return max_cost
def run_trial(f_dfs):
X = genX(n)
Y = genY(X)
batch_fn = make_flat_batch_fn(X, Y, n_per_batch)
Xvalid = genX(1000)
Yvalid = genY(Xvalid)
# Yrms = rms(Y, axis=1).mean()
# Yvalidrms = rms(Yvalid, axis=1).mean()
# --- initial weights
weights = initial_weights(sizes, kind='gaussian', scale=1e-1, rng=rng)
# print(", ".join("||W%d|| = %0.3f" % (i, norm(w)) for i, w in enumerate(weights)))
# genB = lambda shape: initial_w(shape, rng=rng, kind='ortho', normkind='rightmean', scale=0.2)
genB = lambda shape: initial_w(
shape, rng=rng, kind='ortho', normkind='rightmean', scale=0.3)
directBs = [genB((dout, dhid)) for dhid in dhids]
def test_derivative(f, df):
get_network = lambda **kwargs: Network(
weights, f=f, df=df, biases=None, noise=0, **kwargs)
bp_learner = BPLearner(get_network(),
squared_cost,
rms_error,
eta=eta,
alpha=alpha,
name='BP')
bp_learner.weight_norms = []
fas_learner = FASkipLearner(get_network(),
squared_cost,
rms_error,
eta=eta,
alpha=alpha,
name='DFA')
fas_learner.Bs = directBs
learners = [bp_learner, fas_learner]
for learner in learners:
learner.train(1, batch_fn)
for learner in learners:
print(", ".join("||W%d|| = %0.3f" % (i, norm(w))
for i, w in enumerate(learner.network.weights)))
return learners
results = []
for f_df in f_dfs:
results.append(test_derivative(*f_df))
return results
def run_trial(f_dfs):
trial_seed = rng.randint(2**30)
# --- initial weights
weights = initial_weights(sizes, kind='gaussian', scale=1e-1, rng=rng)
# print(", ".join("||W%d|| = %0.3f" % (i, norm(w)) for i, w in enumerate(weights)))
genB = lambda shape: initial_w(
shape, kind='ortho', normkind='rightmean', scale=0.2, rng=rng)
directBs = [genB((dout, dhid)) for dhid in dhids]
def test_derivative(f, df):
# batch_fn = make_flat_batch_fn(X, Y, n_per_batch)
get_network = lambda **kwargs: Network(
weights, f=f, df=df, biases=None, noise=0, **kwargs)
bp_learner = BPLearner(get_network(),
cost,
error,
eta=eta,
alpha=alpha,
name='BP')
bp_learner.weight_norms = []
fas_learner = FASkipLearner(get_network(),
cost,
error,
eta=eta,
alpha=alpha,
name='FA')
fas_learner.Bs = directBs
learners = [bp_learner, fas_learner]
for learner in learners:
batch_fn = make_random_batch_fn(
trainX,
trainY,
n_per_batch,
rng=np.random.RandomState(trial_seed))
learner.train(epochs, batch_fn, test_set=test_set)
# for learner in learners:
# print(", ".join("||W%d|| = %0.3f" % (i, norm(w))
# for i, w in enumerate(learner.network.weights)))
return learners
results = []
for f_df in f_dfs:
results.append(test_derivative(*f_df))
return results
def objective(args):
sargs = arg_string(args)
w_kind = args['w_kind']
w_scale = args['w_scale']
b_kind = args['b_kind']
# b_scale = args['b_scale']
eta = args['eta']
# alpha = args['alpha']
alpha = 0
# eta = [args['eta0'], args['eta1'], args['eta2']]
# max_cost = -np.inf
costs = []
for _ in range(5):
f, df = static_f_df(tau_rc=0.05, **args['neuron_type'])
weights = initial_weights(sizes, kind=w_kind, scale=w_scale, rng=rng)
# --- learners
network = Network(weights, f=f, df=df, biases=None)
# network = Network(weights, f=f, df=df, biases=None, noise=1.)
learner = Learner(network, squared_cost, rms_error, eta=eta, alpha=alpha)
# learner.Bs = [initial_w((dout, dhid), kind=b_kind, scale=b_scale) for dhid in dhids]
learner.Bs = [initial_w((dout, dhid), kind=b_kind, normkind='rightmean') for dhid in dhids]
learner.train(1, batch_fn, verbose=0)
y = learner.network.predict(Xvalid)
cost = rms(y - Yvalid, axis=1).mean() / Yvalidrms
costs.append(cost)
costs = sorted(costs)[1:-1] # drop largest and smallest
cost = np.mean(costs)
status = hyperopt.STATUS_OK if np.isfinite(cost) else hyperopt.STATUS_FAIL
print("%s: %0.3e" % (sargs, cost))
return dict(loss=cost, status=status)
# n_per_batch = 2
# n_per_batch = 5
# n_per_batch = 10
n_per_batch = 20
# n_per_batch = 100
# batch_fn = make_flat_batch_fn(trainX, trainY, n_per_batch)
batch_fn = make_random_batch_fn(trainX,
trainY,
n_per_batch,
rng=np.random.RandomState(5))
sizes = [din] + dhids + [dout]
# --- initial weights
weights = initial_weights(sizes, kind='gaussian', scale=1e-1, rng=rng)
print(", ".join("||W%d|| = %0.3f" % (i, norm(w))
for i, w in enumerate(weights)))
# genB = lambda shape: initial_w(shape, kind='ortho', normkind='rightmean', scale=0.2)
# genB = lambda shape: initial_w(shape, kind='ortho', normkind='rightmean', scale=0.4)
# genB = lambda shape: initial_w(shape, kind='ortho', normkind='rightmean', scale=0.1)
genB = lambda shape: initial_w(
shape, kind='identity', normkind='rightmean', scale=0.2)
Bs = [genB((d1, d0)) for d0, d1 in zip(dhids, dhids[1:] + [dout])]
Bs_direct = [genB((dout, dhid)) for dhid in dhids]
def combine_Bs(Bs):
Bs_combined = [Bs[-1]]
for B in Bs[-2::-1]:
Bs_combined.insert(0, np.dot(Bs_combined[0], B))
dtp_cheat = False
def cost(y, yinds, pointers=pointers):
return pointer_squared_cost_on_inds(y, yinds, pointers)
def error(y, yinds, pointers=pointers):
return pointer_class_error_on_inds(y, yinds, pointers)
din = trainX.shape[1]
sizes = [din] + dhids + [dout]
batch_fn = make_flat_batch_fn(trainX, trainY, n_per_batch)
# weights = initial_weights(sizes, kind='uniform', scale=0.001, rng=rng)
weights = initial_weights(sizes, kind='ortho', scale=1, rng=rng)
f, df = static_f_df('liflinear', tau_rc=0.05, amplitude=0.024)
# eta = 1e-1
# eta = 5e-2
# eta = 2e-2
# eta = 1e-2
eta = 4e-3
# eta = 1e-3
# eta = 5e-4
# eta = 2e-4
# eta = 1e-4
# eta = 1e-5
# eta = 0
Xtrain = 2. * rng.randint(0, 2, size=(ntrain, din)) - 1
Ytrain = xor_reduce(Xtrain, axis=1, keepdims=1)
Xtest = 2. * rng.randint(0, 2, size=(ntest, din)) - 1
Ytest = xor_reduce(Xtest, axis=1, keepdims=1)
cost = squared_cost
# error = rms_error
error = binary_classification_error
# --- learn
# weights = initial_weights([din] + dhids + [dout], kind='uniform', scale=0.1)
# weights = initial_weights([din] + dhids + [dout], kind='uniform', scale=0.03, rng=rng)
weights = initial_weights([din] + dhids + [dout],
kind='uniform',
scale=0.1,
rng=rng)
# weights = initial_weights([din] + dhids + [dout], kind='uniform', scale=0.2, rng=rng)
# weights = initial_weights([din] + dhids + [dout], kind='uniform', scale=0.4, rng=rng)
# biases = 0
def decoder(n):
W = np.zeros((n, n // 4))
for i in range(n // 4):
W[4 * i:4 * (i + 1), i] = 0.5 * np.array([1, 1, -1, -1])
return W
def encoder(n):
W = np.zeros((n // 2, n))
# eta = 2e-3
# eta = 5e-3
t_train = 5.
t_test = 0.001
t0 = 0
t1 = t0 + t_train
t2 = t1 + t_test
din = Xtrain.shape[1]
dout = n_labels
sizes = [din] + dhids + [dout]
# --- model
weights = initial_weights([2*din] + dhids + [dout], kind='uniform', scale=4e-3, rng=rng)
# weights = initial_weights([2*din] + dhids + [dout], kind='uniform', scale=4e-8, rng=rng)
# neuron_type = nengo.LIF(tau_rc=0.05, amplitude=0.0014)
neuron_type = nengo.LIF(tau_rc=0.05, amplitude=0.024)
synapse = nengo.synapses.Alpha(0.003)
model = nengo.Network()
model.config[nengo.Ensemble].neuron_type = neuron_type
model.config[nengo.Connection].synapse = synapse
pdt = 0.01
network_args = dict(t0=t0, t1=t1, eta=eta, seed=2, n_output=20, n_error=20,
o_encoders=eye_encoders(dout), e_encoders=eye_encoders(dout),
e_intercepts=Uniform(0, 0.8), pdt=pdt)
def objective(args):
eta = args['eta']
prestime = args['prestime']
n_examples = int(np.ceil(t_train / prestime))
# dataset
T = orthogonalize(rng.normal(size=(din, dout)))
genX = lambda n: rng.normal(scale=0.5, size=(n, din))
genY = lambda X: np.dot(X, T)
X = genX(n_examples)
Y = genY(X)
x_process = nengo.processes.PresentInput(X, prestime)
y_process = nengo.processes.PresentInput(Y, prestime)
Xtest = genX(1000)
Ytest = genY(Xtest)
Ytestrms = rms(Ytest, axis=1).mean()
weights = initial_weights([2 * din] + dhids + [dout],
kind='gaussian',
scale=5e-4,
rng=rng)
fa_args = dict(eta=eta,
seed=2,
n_output=20,
n_error=20,
o_encoders=eye_encoders(dout),
e_encoders=eye_encoders(dout),
e_intercepts=Uniform(0, 0.8),
b_kind='gaussian',
b_scale=1.7)
model = nengo.Network()
model.config[nengo.Ensemble].neuron_type = neuron_type
model.config[nengo.Connection].synapse = synapse
with model:
x = nengo.Node(x_process)
y = nengo.Node(y_process)
xe = Encoder(x, seed=1)
learner = FATwoStepNetwork(xe.output, y, weights, **fa_args)
xp = nengo.Probe(x)
yp = nengo.Probe(y)
xep = nengo.Probe(xe.output)
with nengo.Simulator(model) as sim:
sim.run(t_train)
XEtest = xe.encode(Xtest, sim=sim)
Ztest = learner.forward(sim, XEtest)
cost = rms(Ztest - Ytest, axis=1).mean() / Ytestrms
# save
dt = sim.dt
t = sim.trange()
x = sim.data[xp]
xe = sim.data[xep]
y = sim.data[yp]
z = sim.data[learner.yp]
data = dict(
eta=eta,
prestime=prestime,
dt=dt,
t_train=t_train,
din=din,
dhids=dhids,
dout=dout,
T=T,
X=X,
Y=Y,
Xtest=Xtest,
Ytest=Ytest,
XEtest=XEtest,
Ztest=Ztest,
# t=t, x=x, xe=xe, y=y, z=z,
cost=cost)
rargs = '_'.join('%s=%r' % (k, v) for k, v in args.items())
filename = os.path.join(filedir, 'trial_%s.npz' % (rargs))
np.savez(filename, **data)
print("Saved %r" % filename)
# result
status = hyperopt.STATUS_OK if np.isfinite(cost) else hyperopt.STATUS_FAIL
sargs = arg_string(args)
print("%s: %0.3e" % (sargs, cost))
return dict(loss=cost, status=status)
# f, df = static_f_df('liflinear', tau_rc=0.05, amplitude=1./50)
# f, df = static_f_df('liflinear', tau_rc=0.05, amplitude=0.005)
f, df = static_f_df('liflinear', tau_rc=0.05, amplitude=0.01)
# f, df = static_f_df('liflinear', tau_rc=0.05, amplitude=0.004)
# --- initial weights
# weights = initial_weights(sizes, kind='uniform', scale=0.01, rng=rng)
# weights = initial_weights(sizes, kind='uniform', scale=0.2, rng=rng)
# weights = initial_weights(sizes, kind='ortho', scale=0.003, rng=rng)
# weights = initial_weights(sizes, kind='ortho', scale=0.06, rng=rng)
# weights = initial_weights(sizes, kind='ortho', scale=0.3, rng=rng)
# weights = initial_weights(sizes, kind='ortho', rng=rng)
# weights = initial_weights(sizes, kind='ortho', scale=2, rng=rng)
weights = initial_weights(sizes, kind='gaussian', scale=1e-1, rng=rng)
# weights = initial_weights(sizes, kind='gaussian', scale=3e-2, rng=rng)
# weights = initial_weights(sizes, kind='gaussian', scale=3e-3, rng=rng)
# weights = initial_weights(sizes, kind='uniform', scale=1.7e-2, rng=rng)
# lsuv(X, weights, f, verbose=1)
# lsuv(X, weights, f, target_input=True, target_std=5, verbose=1)
# lsuv(X, weights, f, target_input=True, target_std=2, verbose=1)
print(", ".join("||W%d|| = %0.3f" % (i, norm(w))
for i, w in enumerate(weights)))
# --- network
noise = 0
# noise = 1.
genY = lambda X: np.dot(X, T)
freq = (0.5 / np.pi) / prestime # angular frequency = 1. / prestime
p = nengo.processes.WhiteSignal(n_examples * prestime, freq, rms=0.5)
X = p.run(n_examples * prestime, d=din, dt=0.001, rng=rng)
Y = np.dot(X, T)
x_process = lambda t: X[int(t / 0.001) % len(X)]
y_process = lambda t: Y[int(t / 0.001) % len(Y)]
Xtest = genX(1000)
Ytest = genY(Xtest)
# weights = initial_weights([2*din] + dhids + [dout], kind='ortho', rng=rng)
# weights = initial_weights([2*din] + dhids + [dout], kind='uniform', scale=0.2, rng=rng)
# weights = initial_weights([2*din] + dhids + [dout], kind='uniform', scale=0.4, rng=rng)
weights = initial_weights([2 * din] + dhids + [dout],
kind='gaussian',
scale=4.4e-4,
rng=rng)
# weights = initial_weights([2*din] + dhids + [dout], kind='zeros')
# neuron_type = nengo.LIF(tau_rc=0.05, amplitude=0.005)
neuron_type = nengo.LIF(tau_rc=0.05, amplitude=0.024)
# synapse = nengo.synapses.Alpha(0.005)
synapse = nengo.synapses.Alpha(0.003)
# synapse_n = lambda n: reduce(lambda a, b: a.combine(b), [synapse] * n)
model = nengo.Network()
model.config[nengo.Ensemble].neuron_type = neuron_type
model.config[nengo.Connection].synapse = synapse
# network_args = dict(t0=t0, t1=t1, eta=eta, seed=2)
# network_args = dict(n_output=20, n_error=20, t0=t0, t1=t1, eta=eta, seed=2)
# network_args = dict(n_output=40, n_error=40, t0=t0, t1=t1, eta=eta, seed=2)
