def test_simulation_cycle(self):
fakepop = Pop(fit_fun='policingdemog', inst='test/test')
fakepop.numberOfDemes = 3
fakepop.initialDemeSize = 10
fakepop.numberOfGenerations = 10
try:
fakepop.runSimulation()
for f in glob.glob('test/test/out_*.txt'):
os.remove(f)
except ValueError as e:
assert False, str(e)
def _foo(fb=10,
mutRate=0.1,
fun='pgg',
pars={
"fb": 10,
"b": 0.5,
"c": 0.05,
"gamma": 0.01
}):
population = Pop(fit_fun=fun, inst='test/test')
population.numberOfDemes = 5
population.initialDemeSize = 8
population.numberOfGenerations = 5
population.mutationRate = mutRate
# make sure fitness parameters are alright
population.fitnessParameters.clear()
population.fitnessParameters.update(pars)
population.fitnessParameters.update({'fb': fb})
population.runSimulation()
return population.numberOfGenerations