def main(config, args, run):
"""Main wrapper function for begin_extraction, and is
always accessed in a standalone/independent way. (i.e. calling main
will cause refextract to run in an independent mode)"""
# Flag as running out of bibtask
global RUNNING_INDEPENDENTLY
RUNNING_INDEPENDENTLY = True
if config.verbosity not in range(0, 10):
usage("Error: Verbosity must be an integer between 0 and 10")
setup_loggers(config.verbosity)
if config.version:
# version message and exit
write_message(__revision__, verbose=0)
halt(exit_code=0)
if config.help:
usage()
if not args:
# no files provided for reference extraction - error message
usage("Error: No valid input file specified (file1 [file2 ...])")
try:
run(config, args)
write_message("Extraction complete", verbose=2)
except StandardError, e:
# Remove extra '\n'
write_message(traceback.format_exc()[:-1], verbose=9)
write_message("Error: %s" % e, verbose=0)
halt(exit_code=1)
def task_run_core(recid, records, bibcatalog_system=None, _arxiv=False):
setup_loggers(None, use_bibtask=True)
if _arxiv:
overwrite = True
else:
overwrite = not task_get_option('no-overwrite')
try:
record = extract_references_from_record(recid)
msg = "Extracted references for %s" % recid
safe_to_extract = True
if overwrite:
write_message("%s (overwrite)" % msg)
else:
write_message(msg)
if not check_record_for_refextract(recid):
write_message('Record not safe for re-extraction, skipping')
safe_to_extract = False
if safe_to_extract:
records.append(record)
# Create a RT ticket if necessary
if task_get_option('new') or task_get_option('create-ticket'):
create_ticket(recid, bibcatalog_system)
except FullTextNotAvailable:
write_message("No full text available for %s" % recid)
def task_run_core(recid, records, bibcatalog_system=None, _arxiv=False):
setup_loggers(None, use_bibtask=True)
if _arxiv:
overwrite = True
else:
overwrite = not task_get_option('no-overwrite')
try:
record = extract_references_from_record(recid)
msg = "Extracted references for %s" % recid
safe_to_extract = True
if overwrite:
write_message("%s (overwrite)" % msg)
else:
write_message(msg)
if not check_record_for_refextract(recid):
write_message('Record not safe for re-extraction, skipping')
safe_to_extract = False
if safe_to_extract:
records.append(record)
# Create a RT ticket if necessary
if task_get_option('new') or task_get_option('create-ticket'):
create_ticket(recid, bibcatalog_system)
except FullTextNotAvailable:
write_message("No full text available for %s" % recid)
def main(config, args, run):
"""Main wrapper function for begin_extraction, and is
always accessed in a standalone/independent way. (i.e. calling main
will cause refextract to run in an independent mode)"""
# Flag as running out of bibtask
global RUNNING_INDEPENDENTLY
RUNNING_INDEPENDENTLY = True
if config.verbosity not in range(0, 10):
usage("Error: Verbosity must be an integer between 0 and 10")
setup_loggers(config.verbosity)
if config.version:
# version message and exit
write_message(__revision__, verbose=0)
halt(exit_code=0)
if config.help:
usage()
if not args:
# no files provided for reference extraction - error message
usage("Error: No valid input file specified (file1 [file2 ...])")
try:
run(config, args)
write_message("Extraction complete", verbose=2)
except StandardError, e:
# Remove extra '\n'
write_message(traceback.format_exc()[:-1], verbose=9)
write_message("Error: %s" % e, verbose=0)
halt(exit_code=1)
def task_run_core(recid, records, bibcatalog_system=None):
setup_loggers(None, use_bibtask=True)
try:
extract_one(recid=recid,
records=records,
overwrite=task_get_option('overwrite'),
create_a_ticket=task_get_option('new')
or task_get_option('create-ticket'),
bibcatalog_system=bibcatalog_system)
except FullTextNotAvailable:
write_message("No full text available for %s" % recid)
except NotSafeForExtraction:
write_message('Record not safe for re-extraction, skipping')
def setUp(self):
setup_loggers(verbosity=1)
def setUp(self):
setup_loggers(verbosity=1)
from invenio import refextract_kbs
self.old_override = refextract_kbs.CFG_REFEXTRACT_KBS_OVERRIDE
refextract_kbs.CFG_REFEXTRACT_KBS_OVERRIDE = {}
def setUp(self):
setup_loggers(verbosity=1)
def setUp(self):
setup_loggers(verbosity=1)
from invenio import refextract_kbs
self.old_override = refextract_kbs.CFG_REFEXTRACT_KBS_OVERRIDE
refextract_kbs.CFG_REFEXTRACT_KBS_OVERRIDE = {}
