def test_interpolator_overspecified(self):
# Over specification by means of interpolating over two coordinates
# mapped to the same dimension.
msg = 'Coordinates repeat a data dimension - '\
'the interpolation would be over-specified'
with self.assertRaisesRegexp(ValueError, msg):
LinearInterpolator(self.cube, ['wibble', 'height'])
def test_interpolate_non_monotonic(self):
self.cube.add_aux_coord(
iris.coords.AuxCoord([0, 3, 2], long_name='non-monotonic'), 1)
msg = ('Cannot interpolate over the non-monotonic coordinate '
'non-monotonic.')
with self.assertRaisesRegexp(ValueError, msg):
LinearInterpolator(self.cube, ['non-monotonic'])
def test_unsorted_datadim_mapping(self):
# Currently unsorted data dimension mapping is not supported as the
# indexing is not yet clever enough to remap the interpolated
# coordinates.
self.cube.transpose((0, 2, 1))
interpolator = LinearInterpolator(self.cube, ['latitude'])
msg = 'Currently only increasing data_dims is supported.'
with self.assertRaisesRegexp(NotImplementedError, msg):
interpolator([0])
def setUp(self):
ThreeDimCube.setUp(self)
self.cube.coord('longitude')._points = np.linspace(0,
360,
4,
endpoint=False)
self.cube.coord('longitude').circular = True
self.cube.coord('longitude').units = 'degrees'
self.interpolator = LinearInterpolator(self.cube, ['longitude'],
extrapolation_mode='nan')
self.cube_reverselons = self.cube[:, :, ::-1]
self.interpolator_reverselons = LinearInterpolator(
self.cube_reverselons, ['longitude'], extrapolation_mode='nan')
self.testpoints_fully_wrapped = ([[180, 270]], [[-180, -90]])
self.testpoints_partially_wrapped = ([[180, 90]], [[-180, 90]])
self.testpoints_fully_wrapped_twice = ([np.linspace(-360, 360, 100)], [
(np.linspace(-360, 360, 100) + 360) % 360
])
def test_fully_wrapped_not_circular(self):
cube = stock.lat_lon_cube()
new_long = cube.coord('longitude').copy(
cube.coord('longitude').points + 710)
cube.remove_coord('longitude')
cube.add_dim_coord(new_long, 1)
interpolator = LinearInterpolator(cube, ['longitude'])
res = interpolator([-10])
self.assertArrayEqual(res.data, cube[:, 1].data)
def test_interpolator_overspecified_scalar(self):
# Over specification by means of interpolating over one dimension
# coordinate and a scalar coordinate (not mapped to a dimension).
self.cube.add_aux_coord(iris.coords.AuxCoord(1, long_name='scalar'),
None)
msg = 'Coordinates repeat a data dimension - '\
'the interpolation would be over-specified'
with self.assertRaisesRegexp(ValueError, msg):
LinearInterpolator(self.cube, ['wibble', 'scalar'])
def test_properties(self):
interpolator = LinearInterpolator(self.cube, ['latitude'])
# Default extrapolation mode.
self.assertEqual(interpolator.extrapolation_mode, 'linear')
# Access to cube property of the LinearInterpolator instance.
self.assertEqual(interpolator.cube, self.cube)
# Access to the resulting coordinate which we are interpolating over.
self.assertEqual(interpolator.coords, [self.cube.coord('latitude')])
def test_orthogonal_cube(self):
interpolator = LinearInterpolator(self.cube, ['grid_latitude'])
result_cube = interpolator([1])
# Explicit mask comparison to ensure mask retention.
# Masked value input
self.assertTrue(self.cube.data.mask[0, 0, 0, 0])
# Mask retention on output
self.assertTrue(result_cube.data.mask[0, 0, 0])
self.assertCML(
result_cube,
('experimental', 'analysis', 'interpolate', 'LinearInterpolator',
'orthogonal_cube_with_factory.cml'))
def setUp(self):
"""
thingness / (1) (wibble: 2; latitude: 1)
Dimension coordinates:
wibble x -
latitude - x
Auxiliary coordinates:
height x -
bar - x
foo - x
Scalar coordinates:
longitude: 0
"""
ThreeDimCube.setUp(self)
self.cube = self.cube[:, 0:1, 0]
self.interpolator = LinearInterpolator(self.cube, ['latitude'])
def test_interpolate_data_default_extrapolation(self):
# Sample point outside the coordinate range.
interpolator = LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='linear')
result = interpolator([[-1]])
self._interpolate_data_linear_extrapolation(result)
def check_expected():
# Check a simple case is equivalent to extracting the first row.
self.interpolator = LinearInterpolator(self.cube, ['latitude'])
expected = self.data[:, 0:1, :]
result = self.interpolator([[0]])
self.assertArrayEqual(result.data, expected)
def test_circular(self):
self.cube.coord('longitude').circular = True
interpolator = LinearInterpolator(self.cube, ['longitude'])
self.assertTrue(interpolator.cube.has_lazy_data())
def _extrapolation_dtype(self, dtype):
interpolator = LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='nan')
result = interpolator([[-1]])
self.assertTrue(np.all(np.isnan(result.data)))
def setUp(self):
ThreeDimCube.setUp(self)
coords = ['height', 'longitude']
self.interpolator = LinearInterpolator(self.cube, coords)
def test_interpolate_data_error_on_extrapolation(self):
msg = 'One of the requested xi is out of bounds in dimension 0'
interpolator = LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='error')
with assert_raises_regexp(ValueError, msg):
interpolator([[-1]])
def setUp(self):
ThreeDimCube.setUp(self)
self.interpolator = LinearInterpolator(self.cube,
['latitude', 'longitude'])
def test_multi_dim_coord_interpolation(self):
msg = 'Interpolation coords must be 1-d for rectilinear interpolation.'
with self.assertRaisesRegexp(ValueError, msg):
interpolator = LinearInterpolator(self.cube, ['foo', 'bar'])
interpolator([[15], [10]])
def test_interpolate_data_nan_extrapolation_not_needed(self):
# No extrapolation for a single length dimension.
interpolator = LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='nan')
result = interpolator([[0]])
self.assertArrayEqual(result.data, self.cube.data)
def test_interpolate_data_unsupported_extrapolation(self):
msg = "Extrapolation mode 'unsupported' not supported"
with assert_raises_regexp(ValueError, msg):
LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='unsupported')
def test_interpolate_data_nan_extrapolation(self):
interpolator = LinearInterpolator(self.cube, ['latitude'],
extrapolation_mode='nan')
result = interpolator([[1001]])
self.assertTrue(np.all(np.isnan(result.data)))
def test_interpolate_bad_coord_name(self):
with self.assertRaises(iris.exceptions.CoordinateNotFoundError):
LinearInterpolator(self.cube, ['doesnt exist'])
def test_interpolate_data_dtype_casting(self):
data = self.data.astype(int)
self.cube.data = data
self.interpolator = LinearInterpolator(self.cube, ['latitude'])
result = self.interpolator([[0.125]])
self.assertEqual(result.data.dtype, np.float64)
def test_default_collapse_scalar(self):
interpolator = LinearInterpolator(self.cube, ['wibble'])
result = interpolator([0])
self.assertEqual(result.shape, (3, 4))
def test_no_collapse_scalar(self):
interpolator = LinearInterpolator(self.cube, ['wibble'])
result = interpolator([0], collapse_scalar=False)
self.assertEqual(result.shape, (1, 3, 4))
