def rename_collection(self, irods_collection, new_name):
"""Rename a collection from irods
irods_collection : path (str)"""
dataObjRenameInp = irods.dataObjCopyInp_t()
srcDataObj = dataObjRenameInp.srcDataObjInp
dstDataObj = dataObjRenameInp.destDataObjInp
srcDataObj.oprType = irods.RENAME_COLL
dstDataObj.oprType = irods.RENAME_COLL
srcDataObj.objPath = irods_collection
dstDataObj.objPath = new_name
return irods.rcDataObjRename(self.conn, dataObjRenameInp)
def move_collection(self, path, new_path):
"""Move a collection in irods
return True if the dest collection is already present"""
dataObjRenameInp = irods.dataObjCopyInp_t()
srcDataObj = dataObjRenameInp.srcDataObjInp
dstDataObj = dataObjRenameInp.destDataObjInp
srcDataObj.oprType = irods.RENAME_COLL
dstDataObj.oprType = irods.RENAME_COLL
srcDataObj.objPath = path
dstDataObj.objPath = new_path
status = irods.rcDataObjRename(self.conn, dataObjRenameInp)
return status
def rename_file(self, file_info, new_name):
"""Rename a file from irods
file_info : (collection, file, resource)
new_name : str"""
(collection, irods_file, _) = file_info
dataObjRenameInp = irods.dataObjCopyInp_t()
srcDataObj = dataObjRenameInp.srcDataObjInp
dstDataObj = dataObjRenameInp.destDataObjInp
srcDataObj.oprType = irods.RENAME_DATA_OBJ
dstDataObj.oprType = irods.RENAME_DATA_OBJ
srcDataObj.objPath = collection + '/' + irods_file
dstDataObj.objPath = collection + '/' + new_name
return irods.rcDataObjRename(self.conn, dataObjRenameInp)
def move_file(self, path, new_path, overwrite=False):
"""Move a file in irods
return True if the file is already present"""
if overwrite:
self.delete_file(new_path)
dataObjRenameInp = irods.dataObjCopyInp_t()
srcDataObj = dataObjRenameInp.srcDataObjInp
dstDataObj = dataObjRenameInp.destDataObjInp
srcDataObj.oprType = irods.RENAME_DATA_OBJ
dstDataObj.oprType = irods.RENAME_DATA_OBJ
srcDataObj.objPath = path
dstDataObj.objPath = new_path
status = irods.rcDataObjRename(self.conn, dataObjRenameInp)
return status == irods.CAT_NAME_EXISTS_AS_DATAOBJ