def test_add_tag_values_nullValues(self):
line = self.entab("CHROM|POS|ID|REF|ALT|QUAL|FILTER|INFO|JQ_DP:{}{}|X:.|Y:.\n".format(summarize_caller.JQ_SUMMARY_TAG, summarize_caller.JQ_REPORTED))
processedVcfRecord = VcfRecord.parse_record(line, ["SA", "SB"])
tag = summarize_caller._SamplesReported()
tag.add_tag_values(processedVcfRecord)
expected = self.entab("CHROM|POS|ID|REF|ALT|QUAL|FILTER|INFO;{}{}=0|JQ_DP:{}{}|X:.|Y:.\n".format(summarize_caller.JQ_SUMMARY_TAG, summarize_caller.JQ_SAMPLES_REPORTED, summarize_caller.JQ_SUMMARY_TAG, summarize_caller.JQ_REPORTED))
self.assertEquals(expected, processedVcfRecord.text())
def test_metaheader(self):
split_metaheader = summarize_caller._SamplesReported().metaheader.split("\n")
self.assertEquals('##INFO=<ID={}{},Number=1,Type=Integer,Description="Count of samples where this variant appeared in any of the Jacquard tagged VCFs (regardless of quality/filtering)">'.format(summarize_caller.JQ_SUMMARY_TAG, summarize_caller.JQ_SAMPLES_REPORTED),
split_metaheader[0])
