'tc':'tuningCurve',
'bf':'bestFreq',
'3p':'3mWpulse',
'1p':'1mWpulse',
'2afc':'2afc'}
badSessionList = []#prints bad sessions at end
exp = cellDB.Experiment(animalName='test053', date ='2015-05-11', experimenter='billy', defaultParadigm='tuning_curve')
site1 = exp.add_site(depth=1.00, tetrodes=[1,2,3,4,5,6,7,8])
site1.add_session('17-06-28', 'a', sessionTypes['tc'])
site1.add_session('17-16-31', 'a', sessionTypes['2afc'], paradigm='2afc')
try:
sitefuncs.nick_lan_daily_report_v2(site1, 'site1', mainRasterInds=None, mainTCind=0)
except:
badSessionList.append(exp.date)
exp = cellDB.Experiment(animalName='test053', date ='2015-05-12', experimenter='billy', defaultParadigm='tuning_curve')
site1 = exp.add_site(depth=1.00, tetrodes=[1,2,3,4,5,6,7,8])
site1.add_session('15-32-11', 'a', sessionTypes['tc'])
site1.add_session('15-41-58', 'a', sessionTypes['2afc'], paradigm='2afc')
try:
sitefuncs.nick_lan_daily_report_v2(site1, 'site1', mainRasterInds=None, mainTCind=0)
except:
badSessionList.append(exp.date)
exp = cellDB.Experiment(animalName='test053', date ='2015-05-13', experimenter='billy', defaultParadigm='tuning_curve')
site1 = exp.add_site(depth=1.00, tetrodes=[1,2,3,4,5,6,7,8])
site1.add_session('14-37-50', 'a', sessionTypes['tc'])
site1.add_session('16-30-36', 'a', sessionTypes['2afc'], paradigm='2afc')
try:
sitefuncs.nick_lan_daily_report_v2(site1, 'site1', mainRasterInds=None, mainTCind=0)
except:
badSessionList.append(exp.date)
'''
exp = cellDB.Experiment(animalName='adap013',
date='2016-03-22',
experimenter='billy',
defaultParadigm='tuning_curve')
site1 = exp.add_site(depth=2.375, tetrodes=[1, 2, 3, 4, 5, 6, 7, 8])
site1.add_session('13-17-21', 'a', sessionTypes['tc'])
site1.add_session('13-32-19', 'a', sessionTypes['2afc'], paradigm='2afc')
try:
sitefuncs.nick_lan_daily_report_v2(site1,
'site1',
mainRasterInds=None,
mainTCind=0)
except:
badSessionList.append(exp.date)
exp = cellDB.Experiment(animalName='adap013',
date='2016-03-24',
experimenter='billy',
defaultParadigm='tuning_curve')
site1 = exp.add_site(depth=2.500, tetrodes=[1, 2, 3, 4, 5, 6, 7, 8])
site1.add_session('14-24-55', 'a', sessionTypes['tc'])
site1.add_session('14-34-32', 'a', sessionTypes['2afc'], paradigm='2afc')
try:
sitefuncs.nick_lan_daily_report_v2(site1,
'site1',
mainRasterInds=None,
cluster4 = site3.add_cluster(
cluster=4, tetrode=6
) #soundResponsive=True, laserPulseResponse=True, followsLaserTrain=True, comments='tuned')
cluster5 = site3.add_cluster(
cluster=5, tetrode=6
) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments = 'tuned')
cluster11 = site3.add_cluster(
cluster=11, tetrode=6
) #soundResponsive=True, laserPulseResponse=True,followsLaserTrain=True, comments='inhibited by laser, not tuned')
soundResponsiveCellCount += 5
laserResponsiveCellCount += 1
soundnlaserResponsiveCellCount += 1
soundResponsiveTuned = +3
#sitefuncs.plot_report_only_good_clusters(site3, 'site3', mainRasterInds=[0,1,2], mainTCind=4)
sitefuncs.nick_lan_daily_report_v2(site3,
'site3',
mainRasterInds=[0, 1, 2],
mainTCind=4)
site4 = exp0701.add_site(depth=2800, tetrodes=[6])
site4.add_session('19-49-07', None, sessionTypes['lp'])
site4.add_session('19-52-08', None, sessionTypes['nb'])
site4.add_session('19-54-43', None, sessionTypes['lt'])
site4.add_session('19-58-34', 'd', sessionTypes['tc'])
site4.add_session('20-11-17', None, sessionTypes['3p'])
site4.add_session('20-14-20', None, sessionTypes['1p'])
cluster3 = site4.add_cluster(
cluster=3, tetrode=6
) #soundResponsive=True, laserPulseResponse=True, followsLaserTrain=False, comments='fair cell')
cluster4 = site4.add_cluster(
cluster=4, tetrode=6
) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments='fair cell, ISI violation')
site3.add_session('19-09-42', None, sessionTypes['nb'])
site3.add_session('19-13-36', None, sessionTypes['lp'])
site3.add_session('19-16-32', None, sessionTypes['lt'])
site3.add_session('19-23-35', None, sessionTypes['1p'])
site3.add_session('19-30-41', 'c', sessionTypes['tc'])
cluster2 = site3.add_cluster(cluster=2, tetrode=6) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments='fair cell, no obvious tuning')
cluster3 = site3.add_cluster(cluster=3, tetrode=6) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments = 'tuned')
cluster4 = site3.add_cluster(cluster=4, tetrode=6) #soundResponsive=True, laserPulseResponse=True, followsLaserTrain=True, comments='tuned')
cluster5 = site3.add_cluster(cluster=5, tetrode=6) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments = 'tuned')
cluster11 = site3.add_cluster(cluster=11, tetrode=6) #soundResponsive=True, laserPulseResponse=True,followsLaserTrain=True, comments='inhibited by laser, not tuned')
soundResponsiveCellCount+=5
laserResponsiveCellCount+=1
soundnlaserResponsiveCellCount+=1
soundResponsiveTuned=+3
#sitefuncs.plot_report_only_good_clusters(site3, 'site3', mainRasterInds=[0,1,2], mainTCind=4)
sitefuncs.nick_lan_daily_report_v2(site3, 'site3', mainRasterInds=[0,1,2], mainTCind=4)
site4 = exp0701.add_site(depth = 2800, tetrodes = [6])
site4.add_session('19-49-07', None, sessionTypes['lp'])
site4.add_session('19-52-08', None, sessionTypes['nb'])
site4.add_session('19-54-43', None, sessionTypes['lt'])
site4.add_session('19-58-34', 'd', sessionTypes['tc'])
site4.add_session('20-11-17', None, sessionTypes['3p'])
site4.add_session('20-14-20', None, sessionTypes['1p'])
cluster3 = site4.add_cluster(cluster=3, tetrode=6) #soundResponsive=True, laserPulseResponse=True, followsLaserTrain=False, comments='fair cell')
cluster4 = site4.add_cluster(cluster=4, tetrode=6) #soundResponsive=True, laserPulseResponse=False, followsLaserTrain=False, comments='fair cell, ISI violation')
cluster7 = site4.add_cluster(cluster=7, tetrode=6) #soundResponsive=True, laserPulseResponse=True, followsLaserTrain=True, comments='good cell')
#sitefuncs.plot_report_only_good_clusters(site4, 'site4', mainRasterInds=[0,1,2], mainTCind=3)
sitefuncs.nick_lan_daily_report_v2(site4, 'site4', mainRasterInds=[0,1,2], mainTCind=3)
site5 = exp0701.add_site(depth = 2900, tetrodes = [3, 6])
